Annotations: 5MJ0

Extracellular domain of human CD83 - cubic crystal form

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	AARP2CN	e5mj0B1	A: alpha arrays	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: AARP2CN	ECOD (v295.2)
A	AARP2CN	e5mj0A1	A: alpha arrays	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: AARP2CN	ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF07686	Immunoglobulin V-set domain (V-set)	Immunoglobulin V-set domain	This domain is found in antibodies as well as neural protein P0 and CTL4 amongst others.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	CD83 antigen	-	humoral immune response response to stimulus immune response immune system process cellular response to stimulus regulation of biological process regulation of cellular process signaling biological regulation cellular process signal transduction cell communication defense response response to stress	cell periphery cellular anatomical structure plasma membrane membrane cell surface external side of plasma membrane side of membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
A, B	IPR036179	Immunoglobulin-like domain superfamily	Homologous Superfamily
A, B	IPR013106	Immunoglobulin V-set domain	Domain
A, B	IPR003599	Immunoglobulin domain subtype	Domain
A, B	IPR007110	Immunoglobulin-like domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B	: Q01151	rheumatoid arthritis Arsenic Poisoning juvenile idiopathic arthritis lymphoplasmacytic lymphoma MALT lymphoma ovarian cancer acute myeloid leukemia cutaneous lupus erythematosus gastric carcinoma lung cancer malignant ependymoma pituitary cancer skin disease hepatocellular carcinoma lung carcinoma rheumatoid arthritis Arsenic Poisoning juvenile idiopathic arthritis lymphoplasmacytic lymphoma MALT lymphoma ovarian cancer acute myeloid leukemia cutaneous lupus erythematosus gastric carcinoma lung cancer malignant ependymoma pituitary cancer skin disease hepatocellular carcinoma lung carcinoma malignant mesothelioma non-small cell lung carcinoma psoriasis ulcerative colitis B-cell chronic lymphocytic leukemia gastric cancer interstitial cystitis lung adenocarcinoma

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.