5M30 | pdb_00005m30

Structure of TssK from T6SS EAEC in complex with nanobody nb18


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Fe5m30F1 A: a/b three-layered sandwichesX: P-loop domains-likeH: Immunoglobulin-relatedT: HAD-likeF:ECOD (v294.1)
Ee5m30E1 A: a/b three-layered sandwichesX: P-loop domains-likeH: Immunoglobulin-relatedT: HAD-likeF:ECOD (v294.1)
De5m30D1 A: a/b three-layered sandwichesX: P-loop domains-likeH: Immunoglobulin-relatedT: HAD-likeF:ECOD (v294.1)
CPDH_Ne5m30C1 A: a/b three-layered sandwichesX: P-loop domains-likeH: RelE-likeT: RelE-likeF: PDH_NECOD (v294.1)
BPDH_Ne5m30B1 A: a/b three-layered sandwichesX: P-loop domains-likeH: RelE-likeT: RelE-likeF: PDH_NECOD (v294.1)
APDH_Ne5m30A1 A: a/b three-layered sandwichesX: P-loop domains-likeH: RelE-likeT: RelE-likeF: PDH_NECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
F2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
E2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
D2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
D, E, F
Heavy ChainIGHV1 -type vi secretion proteinSAbDab (2026-03-27)

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C
IPR010263Type VI secretion system TssKFamily