5M1J

Nonstop ribosomal complex bound with Dom34 and Hbs1


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth A1]SCOP2B SuperfamilyTranslational machinery components8037464 3000571 SCOP2B (2022-06-29)
A [auth A1]SCOP2B SuperfamilyL30e-like8037467 3001739 SCOP2B (2022-06-29)
A [auth A1]SCOP2B SuperfamilyDom34/Pelota N-terminal domain-like8037463 3000284 SCOP2B (2022-06-29)
J [auth E2]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8052760 3000334 SCOP2B (2022-06-29)
J [auth E2]SCOP2B SuperfamilyAlpha-L RNA-binding motif8052758 3001473 SCOP2B (2022-06-29)
J [auth E2]SCOP2B SuperfamilyNucleic acid-binding proteins8052759 3000135 SCOP2B (2022-06-29)
K [auth e2]SCOP2B SuperfamilyRibosomal protein S30e-like8053451 3002190 SCOP2B (2022-06-29)
L [auth F2]SCOP2B SuperfamilyRibosomal protein S78065993 3000799 SCOP2B (2022-06-29)
M [auth G2]SCOP2B SuperfamilyGS N-terminal domain-like8053173 3000408 SCOP2B (2022-06-29)
P [auth I2]SCOP2B Superfamily50S Ribosomal protein L14-like8053083 3000433 SCOP2B (2022-06-29)
R [auth K2]SCOP2B SuperfamilyWinged helix DNA-binding domain8055713 3000034 SCOP2B (2022-06-29)
S [auth L2]SCOP2B SuperfamilyRibosomal S17 N-terminal domain-like8052736 3002138 SCOP2B (2022-06-29)
S [auth L2]SCOP2B SuperfamilyNucleic acid-binding proteins8052738 3000135 SCOP2B (2022-06-29)
B [auth A2]SCOP2 FamilyRibosomal protein S2-like8061279 4003744 SCOP2 (2022-06-29)
B [auth A2]SCOP2 SuperfamilySIS domain/Ribosomal protein S2-like8061280 3001397 SCOP2 (2022-06-29)
T [auth M2]SCOP2B SuperfamilyL30e-like8096946 3001739 SCOP2B (2022-06-29)
U [auth N2]SCOP2B SuperfamilyS15/NS1 RNA-binding domain8052974 3001284 SCOP2B (2022-06-29)
U [auth N2]SCOP2B SuperfamilyHomeodomain-like8052973 3000001 SCOP2B (2022-06-29)
V [auth O2]SCOP2B SuperfamilyTranslational machinery components8095805 3000571 SCOP2B (2022-06-29)
W [auth P2]SCOP2B SuperfamilyRibosomal protein S198086076 3000686 SCOP2B (2022-06-29)
X [auth Q2]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like8103366 3000100 SCOP2B (2022-06-29)
Z [auth S2]SCOP2B SuperfamilyS13-like H2TH domain8098450 3000053 SCOP2B (2022-06-29)
BA [auth U2]SCOP2B SuperfamilyRibosomal protein S108098648 3001336 SCOP2B (2022-06-29)
CA [auth V2]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8053136 3000068 SCOP2B (2022-06-29)
C [auth a2]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8053149 3000068 SCOP2B (2022-06-29)
DA [auth W2]SCOP2B SuperfamilyRibosomal protein S88096922 3000709 SCOP2B (2022-06-29)
GA [auth Z2]SCOP2B SuperfamilyWinged helix DNA-binding domain8059235 3000034 SCOP2B (2022-06-29)
MA [auth a5]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8077127 3001045 SCOP2B (2022-06-29)
D [auth B2]SCOP2B SuperfamilyRibosomal S3Ae-like8053211 3002166 SCOP2B (2022-06-29)
OA [auth b5]SCOP2B SuperfamilyRibosomal protein L29e8053045 3002157 SCOP2B (2022-06-29)
PA [auth B5]SCOP2B SuperfamilyTranslational proteins8078363 3000811 SCOP2B (2022-06-29)
QA [auth c5]SCOP2B SuperfamilyL30e-like8039862 3001739 SCOP2B (2022-06-29)
RA [auth C5]SCOP2B Superfamily60S ribosomal protein L4 C-terminal domain-like8052815 3002143 SCOP2B (2022-06-29)
RA [auth C5]SCOP2B SuperfamilyRibosomal protein L48052816 3001146 SCOP2B (2022-06-29)
SA [auth D5]SCOP2B SuperfamilyTranslational machinery components8052875 3000571 SCOP2B (2022-06-29)
VA [auth f5]SCOP2B SuperfamilyTranslational proteins8087451 3000811 SCOP2B (2022-06-29)
WA [auth F5]SCOP2B SuperfamilyRibosomal protein L30p/L7e8052917 3001378 SCOP2B (2022-06-29)
WA [auth F5]SCOP2B SuperfamilyRibosomal L30p/L7e protein N-terminal domain-lke8052916 3002152 SCOP2B (2022-06-29)
XA [auth g5]SCOP2B SuperfamilyRibosomal protein L34e-like8053547 3002203 SCOP2B (2022-06-29)
YA [auth G5]SCOP2B SuperfamilyL30e-like8063962 3001739 SCOP2B (2022-06-29)
BB [auth i5]SCOP2B SuperfamilyRibosomal protein L36e8053115 3002161 SCOP2B (2022-06-29)
CB [auth I5]SCOP2B SuperfamilyRibosomal protein L16p/L10e8079407 3000884 SCOP2B (2022-06-29)
DB [auth J5]SCOP2B SuperfamilyRL5-like8073884 3001709 SCOP2B (2022-06-29)
EB [auth j5]SCOP2B SuperfamilyZn-binding ribosomal proteins8080044 3001320 SCOP2B (2022-06-29)
FB [auth k5]SCOP2B SuperfamilyRibosomal L38e protein-like8053562 3002206 SCOP2B (2022-06-29)
GB [auth l5]SCOP2B SuperfamilyRibosomal protein L39e8078549 3001756 SCOP2B (2022-06-29)
HB [auth L5]SCOP2B SuperfamilyRibosomal protein L13e-like8053159 3002162 SCOP2B (2022-06-29)
KB [auth N5]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8082481 3000210 SCOP2B (2022-06-29)
MB [auth p5]SCOP2 FamilyRibosomal protein L37ae8105781 4003704 SCOP2 (2022-06-29)
MB [auth p5]SCOP2 SuperfamilyZn-binding ribosomal proteins8105782 3001320 SCOP2 (2022-06-29)
NB [auth P5]SCOP2B SuperfamilyRibosomal protein L228076708 3001078 SCOP2B (2022-06-29)
OB [auth Q5]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8095970 3001045 SCOP2B (2022-06-29)
QB [auth U5]SCOP2B Superfamily60S Ribosomal protein L22e8053058 3002158 SCOP2B (2022-06-29)
G [auth c2]SCOP2B SuperfamilyNucleic acid-binding proteins8063424 3000135 SCOP2B (2022-06-29)
RB [auth V5]SCOP2B Superfamily50S Ribosomal protein L14-like8103364 3000433 SCOP2B (2022-06-29)
SB [auth Z5]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8053046 3000334 SCOP2B (2022-06-29)
TB [auth K5]SCOP2B SuperfamilyRibosomal protein L138066053 3001134 SCOP2B (2022-06-29)
VB [auth R5]SCOP2B SuperfamilyRibosomal protein L19 (L19e)8077485 3000890 SCOP2B (2022-06-29)
WB [auth X5]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8095962 3000210 SCOP2B (2022-06-29)
XB [auth Y5]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8076760 3000334 SCOP2B (2022-06-29)
ZB [auth E5]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8053109 3000334 SCOP2B (2022-06-29)
BC [auth A6]SCOP2B SuperfamilyEF-Tu post-G domain-like8056493 3002024 SCOP2B (2022-06-29)
BC [auth A6]SCOP2B SuperfamilyRas-like P-loop GTPases8056491 3002022 SCOP2B (2022-06-29)
BC [auth A6]SCOP2B SuperfamilyEF-Tu post-G domain-like8056492 3002024 SCOP2B (2022-06-29)
I [auth d2]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8052569 3000068 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth A1]PF03463e5m1jA13 A: beta barrelsX: SH3H: Dom34/Pelota N-terminal domain-like (From Topology)T: Dom34/Pelota N-terminal domain-likeF: PF03463ECOD (1.6)
A [auth A1]PF03465e5m1jA12 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF03465ECOD (1.6)
A [auth A1]PF03464e5m1jA11 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF03464ECOD (1.6)
J [auth E2]PF00900e5m1jE23 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00900ECOD (1.6)
J [auth E2]PF00467,PF16121e5m1jE21 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF16121ECOD (1.6)
J [auth E2]PF00900,PF01479,PF08071e5m1jE22 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00900,PF01479,PF08071ECOD (1.6)
K [auth e2]PF04758e5m1je21 A: extended segmentsX: 40S ribosomal protein S30 (S30e) (From Topology)H: 40S ribosomal protein S30 (S30e) (From Topology)T: 40S ribosomal protein S30 (S30e)F: PF04758ECOD (1.6)
L [auth F2]PF00177e5m1jF21 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: PF00177ECOD (1.6)
M [auth G2]PF01092e5m1jG21 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: PF01092ECOD (1.6)
N [auth g2]PF00400e5m1jg21 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF00400ECOD (1.6)
O [auth H2]PF01251e5m1jH21 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: PF01251ECOD (1.6)
P [auth I2]PF01201e5m1jI21 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF01201ECOD (1.6)
Q [auth J2]PF00163,PF01479e5m1jJ21 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00163,PF01479ECOD (1.6)
R [auth K2]PF03501e5m1jK21 A: alpha arraysX: HTHH: HTHT: wingedF: PF03501ECOD (1.6)
S [auth L2]PF00366,PF16205e5m1jL21 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00366,PF16205ECOD (1.6)
B [auth A2]PF00318e5m1jA21 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: PF00318ECOD (1.6)
T [auth M2]PF01248e5m1jM21 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
U [auth N2]PF08069e5m1jN21 A: alpha arraysX: HTHH: 40S ribosomal protein S13 N-terminal domain (From Topology)T: 40S ribosomal protein S13 N-terminal domainF: PF08069ECOD (1.6)
U [auth N2]PF00312e5m1jN22 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: PF00312ECOD (1.6)
V [auth O2]PF00411e5m1jO21 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00411ECOD (1.6)
W [auth P2]PF00203e5m1jP21 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: PF00203ECOD (1.6)
X [auth Q2]PF00380e5m1jQ21 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF00380ECOD (1.6)
Y [auth R2]PF00833e5m1jR21 A: alpha arraysX: HTHH: HTHT: FF domainF: PF00833ECOD (1.6)
Z [auth S2]PF00416e5m1jS21 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: PF00416ECOD (1.6)
AA [auth T2]PF01090e5m1jT21 A: alpha arraysX: HTHH: HTHT: wingedF: PF01090ECOD (1.6)
BA [auth U2]PF00338e5m1jU21 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: PF00338ECOD (1.6)
CA [auth V2]PF01249e5m1jV21 A: a+b two layersX: 40S ribosomal protein rpS21 (S21e) (From Topology)H: 40S ribosomal protein rpS21 (S21e) (From Topology)T: 40S ribosomal protein rpS21 (S21e)F: PF01249ECOD (1.6)
C [auth a2]PF01283e5m1ja21 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF01283ECOD (1.6)
DA [auth W2]PF00410e5m1jW21 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: PF00410ECOD (1.6)
DA [auth W2]PF00410e5m1jW22 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: PF00410ECOD (1.6)
EA [auth X2]PF00164e5m1jX21 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00164ECOD (1.6)
FA [auth Y2]PF01282e5m1jY21 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF01282ECOD (1.6)
GA [auth Z2]PF03297e5m1jZ21 A: alpha arraysX: HTHH: HTHT: wingedF: PF03297ECOD (1.6)
IA [auth f2]PF01599e5m1jf21 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01599ECOD (1.6)
MA [auth a5]PF00828e5m1ja51 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
D [auth B2]PF01015e5m1jB21 A: beta barrelsX: Ribosomal protein L25-likeH: 40S ribosomal protein S3A N-terminal domain (From Topology)T: 40S ribosomal protein S3A N-terminal domainF: PF01015ECOD (1.6)
D [auth B2]PF01015e5m1jB22 A: a+b two layersX: T-foldH: 40S ribosomal protein S3A C-terminal domain (From Topology)T: 40S ribosomal protein S3A C-terminal domainF: PF01015ECOD (1.6)
NA [auth A5]PF00181e5m1jA51 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00181ECOD (1.6)
NA [auth A5]PF03947e5m1jA52 A: beta barrelsX: SH3H: SH3T: SH3F: PF03947ECOD (1.6)
OA [auth b5]PF01779e5m1jb51 A: extended segmentsX: RPL29 (From Topology)H: RPL29 (From Topology)T: RPL29F: PF01779ECOD (1.6)
PA [auth B5]PF00297e5m1jB51 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF00297ECOD (1.6)
QA [auth c5]PF01248e5m1jc51 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
RA [auth C5]PF00573e5m1jC51 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: PF00573ECOD (1.6)
RA [auth C5]PF14374e5m1jC52 A: extended segmentsX: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)T: C-terminal helical region in 60S ribosomal protein L4 (L4p)F: PF14374ECOD (1.6)
SA [auth D5]PF14204,PF17144e5m1jD51 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF14204,PF17144ECOD (1.6)
TA [auth d5]PF01198e5m1jd51 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: PF01198ECOD (1.6)
UA [auth e5]PF01655e5m1je51 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: PF01655ECOD (1.6)
VA [auth f5]PF01247e5m1jf51 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF01247ECOD (1.6)
WA [auth F5]PF00327,PF08079e5m1jF51 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327,PF08079ECOD (1.6)
E [auth b2]PF01667e5m1jb21 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01667ECOD (1.6)
XA [auth g5]PF01199e5m1jg51 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: PF01199ECOD (1.6)
YA [auth G5]PF01248e5m1jG51 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
ZA [auth h5]PF00831e5m1jh51 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF00831ECOD (1.6)
AB [auth H5]PF00347e5m1jH51 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: PF00347ECOD (1.6)
BB [auth i5]PF01158e5m1ji51 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: PF01158ECOD (1.6)
CB [auth I5]PF00252e5m1jI51 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: PF00252ECOD (1.6)
DB [auth J5]PF00281,PF00673e5m1jJ51 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: PF00281,PF00673ECOD (1.6)
EB [auth j5]PF01907e5m1jj51 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01907ECOD (1.6)
FB [auth k5]PF01781e5m1jk51 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: PF01781ECOD (1.6)
GB [auth l5]PF00832e5m1jl51 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: PF00832ECOD (1.6)
F [auth C2]PF03719e5m1jC22 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF03719ECOD (1.6)
F [auth C2]PF00333e5m1jC21 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: PF00333ECOD (1.6)
F [auth C2]PF00333e5m1jC23 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: PF00333ECOD (1.6)
HB [auth L5]PF01294e5m1jL51 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: PF01294ECOD (1.6)
IB [auth m5]PF01020e5m1jm51 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01020ECOD (1.6)
JB [auth M5]PF00467,PF01929e5m1jM51 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF01929ECOD (1.6)
KB [auth N5]PF00827e5m1jN51 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00827ECOD (1.6)
LB [auth o5]PF00935e5m1jo51 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF00935ECOD (1.6)
MB [auth p5]PF01780e5m1jp51 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01780ECOD (1.6)
NB [auth P5]PF00237e5m1jP51 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
OB [auth Q5]PF17135e5m1jQ51 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF17135ECOD (1.6)
PB [auth S5]F_UNCLASSIFIEDe5m1jS51 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: F_UNCLASSIFIEDECOD (1.6)
PB [auth S5]PF01775e5m1jS52 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: PF01775ECOD (1.6)
QB [auth U5]PF01776e5m1jU51 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: PF01776ECOD (1.6)
G [auth c2]PF01200e5m1jc21 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF01200ECOD (1.6)
RB [auth V5]PF00238e5m1jV51 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)
SB [auth Z5]PF01777e5m1jZ51 A: beta barrelsX: SH3H: SH3T: SH3F: PF01777ECOD (1.6)
TB [auth K5]PF00572e5m1jK51 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)
UB [auth n5]PF05162e5m1jn51 A: extended segmentsX: Ribosomal protein L41-A (From Topology)H: Ribosomal protein L41-A (From Topology)T: Ribosomal protein L41-AF: PF05162ECOD (1.6)
VB [auth R5]PF01280e5m1jR51 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: PF01280ECOD (1.6)
VB [auth R5]PF01280e5m1jR52 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: PF01280ECOD (1.6)
WB [auth X5]PF00276,PF03939e5m1jX51 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00276,PF03939ECOD (1.6)
XB [auth Y5]PF16906e5m1jY51 A: beta barrelsX: SH3H: SH3T: SH3F: PF16906ECOD (1.6)
YB [auth T5]PF01157e5m1jT51 A: beta barrelsX: SH3H: SH3T: SH3F: PF01157ECOD (1.6)
ZB [auth E5]PF01159e5m1jE51 A: beta barrelsX: SH3H: SH3T: SH3F: PF01159ECOD (1.6)
AC [auth W5]PF01246e5m1jW51 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF01246ECOD (1.6)
H [auth D2]PF00189e5m1jD21 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: PF00189ECOD (1.6)
H [auth D2]PF07650e5m1jD22 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: PF07650ECOD (1.6)
BC [auth A6]PF03144e5m1jA62 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF03144ECOD (1.6)
BC [auth A6]PF22594e5m1jA61 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Aminomethyltransferase beta-barrel domainF: PF22594ECOD (1.6)
BC [auth A6]PF08938e5m1jA64 A: alpha arraysX: RuvA-CH: RuvA-C, UBA, CRAL/TRIO-N, HBS1 (From Topology)T: RuvA-C, UBA, CRAL/TRIO-N, HBS1F: PF08938ECOD (1.6)
BC [auth A6]PF00009e5m1jA63 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00009ECOD (1.6)
I [auth d2]PF00253e5m1jd21 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF00253ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth A1]PF03465eRF1 domain 3 (eRF1_3)eRF1 domain 3The release factor eRF1 terminates protein biosynthesis by recognising stop codons at the A site of the ribosome and stimulating peptidyl-tRNA bond hydrolysis at the peptidyl transferase centre. The crystal structure of human eRF1 is known [1]. The o ...The release factor eRF1 terminates protein biosynthesis by recognising stop codons at the A site of the ribosome and stimulating peptidyl-tRNA bond hydrolysis at the peptidyl transferase centre. The crystal structure of human eRF1 is known [1]. The overall shape and dimensions of eRF1 resemble a tRNA molecule with domains 1, 2, and 3 of eRF1 corresponding to the anticodon loop, aminoacyl acceptor stem, and T stem of a tRNA molecule, respectively. The position of the essential GGQ motif at an exposed tip of domain 2 suggests that the Gln residue coordinates a water molecule to mediate the hydrolytic activity at the peptidyl transferase centre. A conserved groove on domain 1, 80 A from the GGQ motif, is proposed to form the codon recognition site [1]. This family also includes other proteins for which the precise molecular function is unknown. Many of them are from Archaebacteria. These proteins may also be involved in translation termination but this awaits experimental verification.
Domain
A [auth A1]PF03463eRF1 domain 1 (eRF1_1)eRF1 domain 1The release factor eRF1 terminates protein biosynthesis by recognising stop codons at the A site of the ribosome and stimulating peptidyl-tRNA bond hydrolysis at the peptidyl transferase centre. The crystal structure of human eRF1 is known [1]. The o ...The release factor eRF1 terminates protein biosynthesis by recognising stop codons at the A site of the ribosome and stimulating peptidyl-tRNA bond hydrolysis at the peptidyl transferase centre. The crystal structure of human eRF1 is known [1]. The overall shape and dimensions of eRF1 resemble a tRNA molecule with domains 1, 2, and 3 of eRF1 corresponding to the anticodon loop, aminoacyl acceptor stem, and T stem of a tRNA molecule, respectively. The position of the essential GGQ motif at an exposed tip of domain 2 suggests that the Gln residue coordinates a water molecule to mediate the hydrolytic activity at the peptidyl transferase centre. A conserved groove on domain 1, 80 A from the GGQ motif, is proposed to form the codon recognition site [1]. This family also includes other proteins for which the precise molecular function is unknown. Many of them are from Archaebacteria. These proteins may also be involved in translation termination but this awaits experimental verification.
Domain
A [auth A1]PF03464eRF1 domain 2 (eRF1_2)eRF1 domain 2The release factor eRF1 terminates protein biosynthesis by recognising stop codons at the A site of the ribosome and stimulating peptidyl-tRNA bond hydrolysis at the peptidyl transferase centre. The crystal structure of human eRF1 is known [1]. The o ...The release factor eRF1 terminates protein biosynthesis by recognising stop codons at the A site of the ribosome and stimulating peptidyl-tRNA bond hydrolysis at the peptidyl transferase centre. The crystal structure of human eRF1 is known [1]. The overall shape and dimensions of eRF1 resemble a tRNA molecule with domains 1, 2, and 3 of eRF1 corresponding to the anticodon loop, aminoacyl acceptor stem, and T stem of a tRNA molecule, respectively. The position of the essential GGQ motif at an exposed tip of domain 2 suggests that the Gln residue coordinates a water molecule to mediate the hydrolytic activity at the peptidyl transferase centre. A conserved groove on domain 1, 80 A from the GGQ motif, is proposed to form the codon recognition site [1]. This family also includes other proteins for which the precise molecular function is unknown. Many of them are from Archaebacteria. These proteins may also be involved in translation termination but this awaits experimental verification.
Domain
J [auth E2]PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
J [auth E2]PF1612140S ribosomal protein S4 C-terminus (40S_S4_C)40S ribosomal protein S4 C-terminus- Family
J [auth E2]PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1].Domain
J [auth E2]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
J [auth E2]PF00467KOW motif (KOW)KOW motif- Family
K [auth e2]PF04758Ribosomal protein S30 (Ribosomal_S30)Ribosomal protein S30- Family
L [auth F2]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
M [auth G2]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
N [auth g2]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
O [auth H2]PF01251Ribosomal protein S7e (Ribosomal_S7e)Ribosomal protein S7e- Family
P [auth I2]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
Q [auth J2]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
Q [auth J2]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
R [auth K2]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding.Domain
S [auth L2]PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
S [auth L2]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
B [auth A2]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
T [auth M2]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
U [auth N2]PF08069Ribosomal S13/S15 N-terminal domain (Ribosomal_S13_N)Ribosomal S13/S15 N-terminal domainThis domain is found at the N-terminus of ribosomal S13 and S15 proteins. This domain is also identified as NUC021 [1].Domain
U [auth N2]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
V [auth O2]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
W [auth P2]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
X [auth Q2]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
Y [auth R2]PF00833Ribosomal S17 (Ribosomal_S17e)Ribosomal S17- Family
Z [auth S2]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
AA [auth T2]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
BA [auth U2]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
CA [auth V2]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family
C [auth a2]PF01283Ribosomal protein S26e (Ribosomal_S26e)Ribosomal protein S26e- Family
DA [auth W2]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
EA [auth X2]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
FA [auth Y2]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
GA [auth Z2]PF03297S25 ribosomal protein (Ribosomal_S25)S25 ribosomal protein- Family
IA [auth f2]PF01599Ribosomal protein S27a (Ribosomal_S27)Ribosomal protein S27aThis family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].
Domain
MA [auth a5]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
D [auth B2]PF01015Ribosomal S3Ae family (Ribosomal_S3Ae)Ribosomal S3Ae family- Family
NA [auth A5]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
NA [auth A5]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
OA [auth b5]PF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
PA [auth B5]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
QA [auth c5]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
RA [auth C5]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins.Domain
RA [auth C5]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
SA [auth D5]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
SA [auth D5]PF14204Ribosomal L18 C-terminal region (Ribosomal_L18_c)Ribosomal L18 C-terminal regionThis domain is the C-terminal end of ribosomal L18/L5 proteins.Domain
TA [auth d5]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
UA [auth e5]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
VA [auth f5]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35Ae- Domain
WA [auth F5]PF08079Ribosomal L30 N-terminal domain (Ribosomal_L30_N)Ribosomal L30 N-terminal domainThis presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1].Domain
WA [auth F5]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
E [auth b2]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
XA [auth g5]PF01199Ribosomal protein L34e (Ribosomal_L34e)Ribosomal protein L34e- Family
YA [auth G5]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
ZA [auth h5]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
AB [auth H5]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
BB [auth i5]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
CB [auth I5]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
DB [auth J5]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
DB [auth J5]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
EB [auth j5]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
FB [auth k5]PF01781Ribosomal L38e protein family (Ribosomal_L38e)Ribosomal L38e protein family- Family
GB [auth l5]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
F [auth C2]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
F [auth C2]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
HB [auth L5]PF01294Ribosomal protein L13e (Ribosomal_L13e)Ribosomal protein L13e- Family
IB [auth m5]PF01020Ribosomal L40e family (Ribosomal_L40e)Ribosomal L40e family- Family
JB [auth M5]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
JB [auth M5]PF00467KOW motif (KOW)KOW motif- Family
KB [auth N5]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
LB [auth o5]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
MB [auth p5]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
NB [auth P5]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
OB [auth Q5]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
PB [auth S5]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A.Domain
QB [auth U5]PF01776Ribosomal L22e protein family (Ribosomal_L22e)Ribosomal L22e protein family- Family
G [auth c2]PF01200Ribosomal protein S28e (Ribosomal_S28e)Ribosomal protein S28e- Family
RB [auth V5]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
SB [auth Z5]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
TB [auth K5]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
UB [auth n5]PF05162Ribosomal protein L41 (Ribosomal_L41)Ribosomal protein L41- Family
VB [auth R5]PF01280Ribosomal protein L19e (Ribosomal_L19e)Ribosomal protein L19e- Family
WB [auth X5]PF03939Ribosomal protein L23, N-terminal domain (Ribosomal_L23eN)Ribosomal protein L23, N-terminal domain- Family
WB [auth X5]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
XB [auth Y5]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
XB [auth Y5]PF00467KOW motif (KOW)KOW motif- Family
YB [auth T5]PF01157Ribosomal protein L21e (Ribosomal_L21e)Ribosomal protein L21e- Family
ZB [auth E5]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
AC [auth W5]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24e- Domain
H [auth D2]PF07650KH domain (KH_2)KH domain- Domain
H [auth D2]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
BC [auth A6]PF00009Elongation factor Tu GTP binding domain (GTP_EFTU)Elongation factor Tu GTP binding domainThis domain contains a P-loop motif, also found in several other families such as Pfam:PF00071, Pfam:PF00025 and Pfam:PF00063. Elongation factor Tu consists of three structural domains, this plus two C-terminal beta barrel domains.Domain
I [auth d2]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth A1]Protein DOM34
J [auth E2]40S ribosomal protein S4-A
K [auth e2]40S ribosomal protein S30-A
L [auth F2]40S ribosomal protein S5
M [auth G2]40S ribosomal protein S6-A
N [auth g2]Guanine nucleotide-binding protein subunit beta-like protein
O [auth H2]40S ribosomal protein S7-A
P [auth I2]40S ribosomal protein S8-A
Q [auth J2]40S ribosomal protein S9-A
R [auth K2]40S ribosomal protein S10-A
S [auth L2]40S ribosomal protein S11-A
B [auth A2]40S ribosomal protein S0-A
T [auth M2]40S ribosomal protein S12
U [auth N2]40S ribosomal protein S13
V [auth O2]40S ribosomal protein S14-A
W [auth P2]40S ribosomal protein S15
X [auth Q2]40S ribosomal protein S16-A
Y [auth R2]40S ribosomal protein S17-B
Z [auth S2]40S ribosomal protein S18-A
AA [auth T2]40S ribosomal protein S19-A
BA [auth U2]40S ribosomal protein S20
CA [auth V2]40S ribosomal protein S21-A
C [auth a2]40S ribosomal protein S26-B
DA [auth W2]40S ribosomal protein S22-A
EA [auth X2]40S ribosomal protein S23-A
FA [auth Y2]40S ribosomal protein S24-A
GA [auth Z2]40S ribosomal protein S25-A
HA [auth 22]18S ribosomal RNA---
IA [auth f2]Ubiquitin-40S ribosomal protein S31
JA [auth 14]25S ribosomal RNA---
KA [auth 34]5S ribosomal RNA---
LA [auth 44]5.8S ribosomal RNA---
MA [auth a5]60S ribosomal protein L28
D [auth B2]40S ribosomal protein S1-A
NA [auth A5]60S ribosomal protein L2-A
OA [auth b5]60S ribosomal protein L29
PA [auth B5]60S ribosomal protein L3
QA [auth c5]60S ribosomal protein L30
RA [auth C5]60S ribosomal protein L4-A
SA [auth D5]60S ribosomal protein L5
TA [auth d5]60S ribosomal protein L31-A
UA [auth e5]60S ribosomal protein L32
VA [auth f5]60S ribosomal protein L33-A
WA [auth F5]60S ribosomal protein L7-A
E [auth b2]40S ribosomal protein S27-A
XA [auth g5]60S ribosomal protein L34-A
YA [auth G5]60S ribosomal protein L8-A
ZA [auth h5]60S ribosomal protein L35-A
AB [auth H5]60S ribosomal protein L9-A
BB [auth i5]60S ribosomal protein L36-A
CB [auth I5]60S ribosomal protein L10
DB [auth J5]60S ribosomal protein L11-A
EB [auth j5]60S ribosomal protein L37-A
FB [auth k5]60S ribosomal protein L38
GB [auth l5]60S ribosomal protein L39
F [auth C2]40S ribosomal protein S2
HB [auth L5]60S ribosomal protein L13-A
IB [auth m5]Ubiquitin-60S ribosomal protein L40
JB [auth M5]60S ribosomal protein L14-A
KB [auth N5]60S ribosomal protein L15-A
LB [auth o5]60S ribosomal protein L42-B
MB [auth p5]60S ribosomal protein L43-B
NB [auth P5]60S ribosomal protein L17-A
OB [auth Q5]60S ribosomal protein L18-A
PB [auth S5]60S ribosomal protein L20-A
QB [auth U5]60S ribosomal protein L22-A
G [auth c2]40S ribosomal protein S28-B
RB [auth V5]60S ribosomal protein L23-A
SB [auth Z5]60S ribosomal protein L27-A
TB [auth K5]60S ribosomal protein L16-A
UB [auth n5]60S ribosomal protein L41-B
VB [auth R5]60S ribosomal protein L19-A
WB [auth X5]60S ribosomal protein L25
XB [auth Y5]60S ribosomal protein L26-A
YB [auth T5]60S ribosomal protein L21-A
ZB [auth E5]60S ribosomal protein L6-A
AC [auth W5]60S ribosomal protein L24-A
H [auth D2]40S ribosomal protein S3
BC [auth A6]Protein HBS1
CC [auth X7]nonstop mRNA---
DC [auth A3]yeast Phe-tRNA-Phe---
I [auth d2]40S ribosomal protein S29-A

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth A1]IPR005141eRF1 domain 2Domain
A [auth A1]IPR004405Translation release factor pelotaFamily
A [auth A1]IPR005140eRF1 domain 1/Pelota-likeDomain
A [auth A1]IPR042226eRF1, domain 2 superfamilyHomologous Superfamily
A [auth A1]IPR038069Pelota/DOM34, N-terminal domainHomologous Superfamily
A [auth A1]IPR005142eRF1 domain 3Domain
A [auth A1]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
J [auth E2]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
J [auth E2]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
J [auth E2]IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
J [auth E2]IPR002942RNA-binding S4 domainDomain
J [auth E2]IPR013845Small ribosomal subunit protein eS4, central regionDomain
J [auth E2]IPR000876Small ribosomal subunit protein eS4Family
J [auth E2]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
J [auth E2]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
J [auth E2]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
J [auth E2]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
J [auth E2]IPR005824KOWDomain
K [auth e2]IPR006846Small ribosomal subunit protein eS30Family
L [auth F2]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
L [auth F2]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
L [auth F2]IPR000235Small ribosomal subunit protein uS7Family
L [auth F2]IPR023798Small ribosomal subunit protein uS7 domainDomain
L [auth F2]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
M [auth G2]IPR014401Small ribosomal subunit protein eS6-likeFamily
M [auth G2]IPR001377Small ribosomal subunit protein eS6Family
M [auth G2]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
N [auth g2]IPR019775WD40 repeat, conserved siteConserved Site
N [auth g2]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
N [auth g2]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
N [auth g2]IPR045223Small ribosomal subunit protein RACK1-likeFamily
N [auth g2]IPR001680WD40 repeatRepeat
N [auth g2]IPR020472G-protein beta WD-40 repeatRepeat
O [auth H2]IPR000554Small ribosomal subunit protein eS7Family
O [auth H2]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
P [auth I2]IPR001047Small ribosomal subunit protein eS8Family
P [auth I2]IPR042563Small ribosomal subunit protein eS8 subdomain, eukaryotesHomologous Superfamily
P [auth I2]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
P [auth I2]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
Q [auth J2]IPR002942RNA-binding S4 domainDomain
Q [auth J2]IPR022801Small ribosomal subunit protein uS4Family
Q [auth J2]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
Q [auth J2]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
Q [auth J2]IPR005710Small ribosomal subunit protein uS4, eukaryotic/archaealFamily
Q [auth J2]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
R [auth K2]IPR037447Small ribosomal subunit protein eS10Family
R [auth K2]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
R [auth K2]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
R [auth K2]IPR005326Plectin/eS10, N-terminalDomain
S [auth L2]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
S [auth L2]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
S [auth L2]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
S [auth L2]IPR000266Small ribosomal subunit protein uS17Family
S [auth L2]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
B [auth A2]IPR005707Small ribosomal subunit protein uS2, eukaryotic/archaealFamily
B [auth A2]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
B [auth A2]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
B [auth A2]IPR001865Small ribosomal subunit protein uS2Family
B [auth A2]IPR027498Small ribosomal subunit protein uS2, eukaryoticFamily
T [auth M2]IPR000530Small ribosomal subunit protein eS12Family
T [auth M2]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
T [auth M2]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
T [auth M2]IPR047860Small ribosomal subunit protein eS12, conserved siteConserved Site
U [auth N2]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
U [auth N2]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
U [auth N2]IPR000589Small ribosomal subunit protein uS15Family
U [auth N2]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotesFamily
V [auth O2]IPR001971Small ribosomal subunit protein uS11Family
V [auth O2]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
V [auth O2]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
W [auth P2]IPR002222Small ribosomal subunit protein uS19Family
W [auth P2]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
W [auth P2]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
W [auth P2]IPR005713Small ribosomal subunit protein uS19, eukaryotic/archaealFamily
X [auth Q2]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
X [auth Q2]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
X [auth Q2]IPR000754Small ribosomal subunit protein uS9Family
X [auth Q2]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
Y [auth R2]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
Y [auth R2]IPR001210Small ribosomal subunit protein eS17Family
Y [auth R2]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
Z [auth S2]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
Z [auth S2]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
Z [auth S2]IPR001892Small ribosomal subunit protein uS13Family
Z [auth S2]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
AA [auth T2]IPR001266Small ribosomal subunit protein eS19Family
AA [auth T2]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
AA [auth T2]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
AA [auth T2]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
BA [auth U2]IPR001848Small ribosomal subunit protein uS10Family
BA [auth U2]IPR027486Small ribosomal subunit protein uS10 domainDomain
BA [auth U2]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
BA [auth U2]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
BA [auth U2]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
CA [auth V2]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
CA [auth V2]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
CA [auth V2]IPR001931Small ribosomal subunit protein eS21Family
C [auth a2]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
C [auth a2]IPR000892Small ribosomal subunit protein eS26Family
C [auth a2]IPR047864Ribosomal protein eS26, conserved siteConserved Site
DA [auth W2]IPR000630Small ribosomal subunit protein uS8Family
DA [auth W2]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
DA [auth W2]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
EA [auth X2]IPR006032Small ribosomal subunit protein uS12Family
EA [auth X2]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
EA [auth X2]IPR005680Small ribosomal subunit protein uS12, eukaryotic/archaealFamily
FA [auth Y2]IPR001976Small ribosomal subunit protein eS24Family
FA [auth Y2]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
FA [auth Y2]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
GA [auth Z2]IPR004977Small ribosomal subunit protein eS25Family
GA [auth Z2]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
IA [auth f2]IPR019954Ubiquitin conserved siteConserved Site
IA [auth f2]IPR000626Ubiquitin-like domainDomain
IA [auth f2]IPR038582Small ribosomal subunit protein eS31 eukaryotic-type superfamilyHomologous Superfamily
IA [auth f2]IPR002906Small ribosomal subunit protein eS31Domain
IA [auth f2]IPR019956Ubiquitin domainDomain
IA [auth f2]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
IA [auth f2]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
MA [auth a5]IPR021131Large ribosomal subunit protein uL15/eL18Domain
MA [auth a5]IPR030878Large ribosomal subunit protein uL15Family
MA [auth a5]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
MA [auth a5]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
D [auth B2]IPR001593Small ribosomal subunit protein eS1Family
D [auth B2]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
D [auth B2]IPR027500Small ribosomal subunit protein eS1, eukaryotesFamily
NA [auth A5]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
NA [auth A5]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
NA [auth A5]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
NA [auth A5]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
NA [auth A5]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
NA [auth A5]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
NA [auth A5]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
NA [auth A5]IPR002171Large ribosomal subunit protein uL2Family
OA [auth b5]IPR002673Large ribosomal subunit protein eL29Family
PA [auth B5]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
PA [auth B5]IPR045077Large ribosomal subunit protein uL3, archaeal/eukaryotic-typeFamily
PA [auth B5]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
PA [auth B5]IPR000597Large ribosomal subunit protein uL3Family
PA [auth B5]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
QA [auth c5]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
QA [auth c5]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
QA [auth c5]IPR039109Large ribosomal subunit protein eL30-likeFamily
QA [auth c5]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
RA [auth C5]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
RA [auth C5]IPR002136Large ribosomal subunit protein uL4Family
RA [auth C5]IPR013000Large ribosomal subunit protein uL4, eukaryotic/archaeal, conserved siteConserved Site
RA [auth C5]IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
RA [auth C5]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
SA [auth D5]IPR005485Large ribosomal subunit protein uL18 eukaryotic/archaealFamily
SA [auth D5]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
TA [auth d5]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
TA [auth d5]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
TA [auth d5]IPR000054Large ribosomal subunit protein eL31Family
UA [auth e5]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
UA [auth e5]IPR001515Large ribosomal subunit protein eL32Family
UA [auth e5]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
VA [auth f5]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
VA [auth f5]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
VA [auth f5]IPR001780Large ribosomal subunit protein eL33Family
VA [auth f5]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
WA [auth F5]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
WA [auth F5]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
WA [auth F5]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotesDomain
WA [auth F5]IPR039699Large ribosomal subunit protein uL30Family
WA [auth F5]IPR005998Large ribosomal subunit protein uL30, eukaryoticFamily
WA [auth F5]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
WA [auth F5]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
E [auth b2]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
E [auth b2]IPR000592Small ribosomal subunit protein eS27Family
E [auth b2]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
XA [auth g5]IPR008195Large ribosomal subunit protein eL34Family
XA [auth g5]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
YA [auth G5]IPR001921Large ribosomal subunit protein eL8Family
YA [auth G5]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
YA [auth G5]IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
YA [auth G5]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
YA [auth G5]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
ZA [auth h5]IPR045059Large ribosomal subunit protein uL29, eukaryotesFamily
ZA [auth h5]IPR001854Large ribosomal subunit protein uL29Family
ZA [auth h5]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
ZA [auth h5]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
AB [auth H5]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
AB [auth H5]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
AB [auth H5]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
AB [auth H5]IPR000702Large ribosomal subunit protein uL6-likeFamily
BB [auth i5]IPR000509Large ribosomal subunit protein eL36Family
BB [auth i5]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
CB [auth I5]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
CB [auth I5]IPR001197Large ribosomal subunit protein uL16, eukaryotes/archaeaFamily
CB [auth I5]IPR016180Large ribosomal subunit protein uL16 domainDomain
CB [auth I5]IPR047873Large ribosomal subunit protein uL16Family
CB [auth I5]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryotes/archaeaConserved Site
DB [auth J5]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
DB [auth J5]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
DB [auth J5]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
DB [auth J5]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
DB [auth J5]IPR002132Large ribosomal subunit protein uL5Family
EB [auth j5]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
EB [auth j5]IPR001569Large ribosomal subunit protein eL37Family
EB [auth j5]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
EB [auth j5]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
FB [auth k5]IPR002675Large ribosomal subunit protein eL38Family
FB [auth k5]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
GB [auth l5]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
GB [auth l5]IPR000077Large ribosomal subunit protein eL39Family
GB [auth l5]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
F [auth C2]IPR000851Small ribosomal subunit protein uS5Family
F [auth C2]IPR005711Small ribosomal subunit protein uS5, eukaryotic/archaealFamily
F [auth C2]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
F [auth C2]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
F [auth C2]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
F [auth C2]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
F [auth C2]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
HB [auth L5]IPR001380Large ribosomal subunit protein eL13Family
HB [auth L5]IPR018256Large ribosomal subunit protein eL13, conserved siteConserved Site
IB [auth m5]IPR019954Ubiquitin conserved siteConserved Site
IB [auth m5]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
IB [auth m5]IPR000626Ubiquitin-like domainDomain
IB [auth m5]IPR019956Ubiquitin domainDomain
IB [auth m5]IPR001975Large ribosomal subunit protein eL40 domainDomain
IB [auth m5]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
JB [auth M5]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
JB [auth M5]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
JB [auth M5]IPR039660Large ribosomal subunit protein eL14Family
JB [auth M5]IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
JB [auth M5]IPR002784Large ribosomal subunit protein eL14 domainDomain
JB [auth M5]IPR005824KOWDomain
KB [auth N5]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
KB [auth N5]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
KB [auth N5]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
KB [auth N5]IPR000439Large ribosomal subunit protein eL15Family
LB [auth o5]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
LB [auth o5]IPR000552Large ribosomal subunit protein eL42Family
MB [auth p5]IPR002674Large ribosomal subunit protein eL43Family
MB [auth p5]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
MB [auth p5]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
NB [auth P5]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
NB [auth P5]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
NB [auth P5]IPR001063Large ribosomal subunit protein uL22Family
NB [auth P5]IPR005721Large ribosomal subunit protein uL22, eukaryotic/archaealFamily
OB [auth Q5]IPR021131Large ribosomal subunit protein uL15/eL18Domain
OB [auth Q5]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
OB [auth Q5]IPR000039Large ribosomal subunit protein eL18Family
OB [auth Q5]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
PB [auth S5]IPR028877Large ribosomal subunit protein eL20Family
PB [auth S5]IPR023573Large ribosomal subunit protein eL20 domainDomain
PB [auth S5]IPR021138Large ribosomal subunit protein eL20, eukaryotesFamily
QB [auth U5]IPR002671Large ribosomal subunit protein eL22Family
QB [auth U5]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
G [auth c2]IPR028626Ribosomal protein eS28 conserved siteConserved Site
G [auth c2]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
G [auth c2]IPR000289Small ribosomal subunit protein eS28Family
RB [auth V5]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
RB [auth V5]IPR000218Large ribosomal subunit protein uL14Family
RB [auth V5]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
SB [auth Z5]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
SB [auth Z5]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
SB [auth Z5]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
SB [auth Z5]IPR001141Large ribosomal subunit protein eL27Family
SB [auth Z5]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
TB [auth K5]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
TB [auth K5]IPR005822Large ribosomal subunit protein uL13Family
TB [auth K5]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
TB [auth K5]IPR005755Large ribosomal subunit protein uL13, eukaryotic/archaealFamily
UB [auth n5]IPR007836Large ribosomal subunit protein eS32Family
VB [auth R5]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
VB [auth R5]IPR039547Large ribosomal subunit protein eL19Family
VB [auth R5]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
VB [auth R5]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
VB [auth R5]IPR000196Large ribosomal subunit protein eL19 domainDomain
VB [auth R5]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
WB [auth X5]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
WB [auth X5]IPR013025Large ribosomal subunit protein uL23-likeFamily
WB [auth X5]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
WB [auth X5]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
WB [auth X5]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
XB [auth Y5]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
XB [auth Y5]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
XB [auth Y5]IPR005824KOWDomain
XB [auth Y5]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
XB [auth Y5]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
XB [auth Y5]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
YB [auth T5]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
YB [auth T5]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
YB [auth T5]IPR001147Large ribosomal subunit protein eL21Family
YB [auth T5]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
ZB [auth E5]IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
ZB [auth E5]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
ZB [auth E5]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
ZB [auth E5]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
ZB [auth E5]IPR000915Large ribosomal subunit protein eL6Family
AC [auth W5]IPR000988Large ribosomal subunit protein eL24-relatedFamily
AC [auth W5]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
AC [auth W5]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
H [auth D2]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
H [auth D2]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
H [auth D2]IPR004044K Homology domain, type 2Domain
H [auth D2]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
H [auth D2]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
H [auth D2]IPR005703Small ribosomal subunit protein uS3, eukaryotic/archaealFamily
H [auth D2]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
BC [auth A6]IPR000795Translational (tr)-type GTP-binding domainDomain
BC [auth A6]IPR009001Translation elongation factor EF1A/initiation factor IF2gamma, C-terminalHomologous Superfamily
BC [auth A6]IPR031157Tr-type G domain, conserved siteConserved Site
BC [auth A6]IPR015033HBS1-like protein, N-terminalDomain
BC [auth A6]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
BC [auth A6]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
I [auth d2]IPR001209Small ribosomal subunit protein uS14Family
I [auth d2]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
I [auth d2]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
I [auth d2]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily