Binding of the C-terminal GQYL motif of the bacterial proteasome activator Bpa to the 20S proteasome
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A [auth 0] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8085569 | 3000131 | SCOP2B (2022-06-29) |
| C [auth 2] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8085569 | 3000131 | SCOP2B (2022-06-29) |
| G [auth 6] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8085569 | 3000131 | SCOP2B (2022-06-29) |
| K [auth B] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8085569 | 3000131 | SCOP2B (2022-06-29) |
| Q [auth H] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8085569 | 3000131 | SCOP2B (2022-06-29) |
| S [auth J] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8085569 | 3000131 | SCOP2B (2022-06-29) |
| Z [auth Q] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8085569 | 3000131 | SCOP2B (2022-06-29) |
| V [auth M] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8085569 | 3000131 | SCOP2B (2022-06-29) |
| M [auth D] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8085569 | 3000131 | SCOP2B (2022-06-29) |
| I [auth 8] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8085569 | 3000131 | SCOP2B (2022-06-29) |
| HA [auth Y] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8085569 | 3000131 | SCOP2B (2022-06-29) |
| FA [auth W] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8085569 | 3000131 | SCOP2B (2022-06-29) |
| E [auth 4] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8085569 | 3000131 | SCOP2B (2022-06-29) |
| BA [auth S] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8085569 | 3000131 | SCOP2B (2022-06-29) |
| AA [auth R] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8079171 | 3000131 | SCOP2B (2022-06-29) |
| J [auth A] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8079171 | 3000131 | SCOP2B (2022-06-29) |
| N [auth E] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8079171 | 3000131 | SCOP2B (2022-06-29) |
| P [auth G] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8079171 | 3000131 | SCOP2B (2022-06-29) |
| R [auth I] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8079171 | 3000131 | SCOP2B (2022-06-29) |
| X [auth O] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8079171 | 3000131 | SCOP2B (2022-06-29) |
| Y [auth P] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8079171 | 3000131 | SCOP2B (2022-06-29) |
| W [auth N] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8079171 | 3000131 | SCOP2B (2022-06-29) |
| U [auth L] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8079171 | 3000131 | SCOP2B (2022-06-29) |
| T [auth K] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8079171 | 3000131 | SCOP2B (2022-06-29) |
| O [auth F] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8079171 | 3000131 | SCOP2B (2022-06-29) |
| L [auth C] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8079171 | 3000131 | SCOP2B (2022-06-29) |
| DA [auth U] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8079171 | 3000131 | SCOP2B (2022-06-29) |
| CA [auth T] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8079171 | 3000131 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A [auth 0] | Proteasome | e5lzp01 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| C [auth 2] | Proteasome | e5lzp21 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| G [auth 6] | Proteasome | e5lzp61 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| K [auth B] | Proteasome | e5lzpB1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| Q [auth H] | Proteasome | e5lzpH1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| S [auth J] | Proteasome | e5lzpJ1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| Z [auth Q] | Proteasome | e5lzpQ1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| V [auth M] | Proteasome | e5lzpM1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| M [auth D] | Proteasome | e5lzpD1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| I [auth 8] | Proteasome | e5lzp81 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| HA [auth Y] | Proteasome | e5lzpY1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| FA [auth W] | Proteasome | e5lzpW1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| E [auth 4] | Proteasome | e5lzp41 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| BA [auth S] | Proteasome | e5lzpS1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| AA [auth R] | Proteasome | e5lzpR1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| J [auth A] | Proteasome | e5lzpA1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| N [auth E] | Proteasome | e5lzpE1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| P [auth G] | Proteasome | e5lzpG1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| R [auth I] | Proteasome | e5lzpI1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| X [auth O] | Proteasome | e5lzpO1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| Y [auth P] | Proteasome | e5lzpP1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| W [auth N] | Proteasome | e5lzpN1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| U [auth L] | Proteasome | e5lzpL1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| T [auth K] | Proteasome | e5lzpK1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| O [auth F] | Proteasome | e5lzpF1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| L [auth C] | Proteasome | e5lzpC1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| DA [auth U] | Proteasome | e5lzpU1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| CA [auth T] | Proteasome | e5lzpT1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain | |
| PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR029055 | Nucleophile aminohydrolases, N-terminal | Homologous Superfamily | |
| IPR022296 | Proteasome, alpha subunit, bacterial | Family | |
| IPR050115 | Proteasome subunit alpha | Family | |
| IPR023332 | Proteasome alpha-type subunit | Family | |
| IPR001353 | Proteasome, subunit alpha/beta | Family | |
| IPR029055 | Nucleophile aminohydrolases, N-terminal | Homologous Superfamily | |
| IPR023333 | Proteasome B-type subunit | Family | |
| IPR022483 | Proteasome subunit beta, actinobacteria | Family | |
| IPR001353 | Proteasome, subunit alpha/beta | Family | |
| IPR019695 | Bacterial proteasome activator | Family |














