Structure of F-ATPase from Pichia angusta, state1
External Resource: Annotation
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| N [auth J] | SCOP2B Superfamily | F1 ATPase inhibitor, IF1, C-terminal domain | 8037355 | 3001557 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| M [auth I] | LptE | e5lqzI1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: LptE | ECOD (v294.1) |
| L [auth H] | e5lqzH1 | A: a/b three-layered sandwiches | X: Type II ABC importer transmembrane domain fold | H: DNA mismatch repair protein MutL regulatory subdomain | T: DNA mismatch repair protein MutL regulatory subdomain | F: | ECOD (v294.1) | |
| K [auth G] | e5lqzG1 | A: a/b three-layered sandwiches | X: Type II ABC importer transmembrane domain fold | H: DNA mismatch repair protein MutL regulatory subdomain | T: DNA mismatch repair protein MutL regulatory subdomain | F: | ECOD (v294.1) | |
| J [auth F] | e5lqzF1 | A: a/b three-layered sandwiches | X: Type II ABC importer transmembrane domain fold | H: DNA mismatch repair protein MutL regulatory subdomain | T: DNA mismatch repair protein MutL regulatory subdomain | F: | ECOD (v294.1) | |
| I [auth E] | e5lqzE1 | A: a/b three-layered sandwiches | X: Type II ABC importer transmembrane domain fold | H: DNA mismatch repair protein MutL regulatory subdomain | T: DNA mismatch repair protein MutL regulatory subdomain | F: | ECOD (v294.1) | |
| H [auth D] | e5lqzD1 | A: a/b three-layered sandwiches | X: Type II ABC importer transmembrane domain fold | H: DNA mismatch repair protein MutL regulatory subdomain | T: DNA mismatch repair protein MutL regulatory subdomain | F: | ECOD (v294.1) | |
| G [auth C] | e5lqzC1 | A: a/b three-layered sandwiches | X: Type II ABC importer transmembrane domain fold | H: DNA mismatch repair protein MutL regulatory subdomain | T: DNA mismatch repair protein MutL regulatory subdomain | F: | ECOD (v294.1) | |
| F [auth B] | e5lqzB1 | A: a/b three-layered sandwiches | X: Type II ABC importer transmembrane domain fold | H: DNA mismatch repair protein MutL regulatory subdomain | T: DNA mismatch repair protein MutL regulatory subdomain | F: | ECOD (v294.1) | |
| E [auth A] | e5lqzA1 | A: a/b three-layered sandwiches | X: Type II ABC importer transmembrane domain fold | H: DNA mismatch repair protein MutL regulatory subdomain | T: DNA mismatch repair protein MutL regulatory subdomain | F: | ECOD (v294.1) | |
| CA [auth Y] | Peptidase_C78 | e5lqzY1 | A: a/b three-layered sandwiches | X: MocoBD/DmpA-related | H: ferredoxin-like domain in periplasmic region of MacB | T: ferredoxin-like domain in periplasmic region of MacB | F: Peptidase_C78 | ECOD (v294.1) |
| AA [auth W] | MMS1_N | e5lqzW1 | A: a/b three-layered sandwiches | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: MMS1_N | ECOD (v294.1) |
| Z [auth V] | LptE | e5lqzV1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: LptE | ECOD (v294.1) |
| X [auth T] | e5lqzT1 | A: a/b three-layered sandwiches | X: Type II ABC importer transmembrane domain fold | H: DNA mismatch repair protein MutL regulatory subdomain | T: DNA mismatch repair protein MutL regulatory subdomain | F: | ECOD (v294.1) | |
| W [auth S] | e5lqzS1 | A: a/b three-layered sandwiches | X: Type II ABC importer transmembrane domain fold | H: DNA mismatch repair protein MutL regulatory subdomain | T: DNA mismatch repair protein MutL regulatory subdomain | F: | ECOD (v294.1) | |
| V [auth R] | e5lqzR1 | A: a/b three-layered sandwiches | X: Type II ABC importer transmembrane domain fold | H: DNA mismatch repair protein MutL regulatory subdomain | T: DNA mismatch repair protein MutL regulatory subdomain | F: | ECOD (v294.1) | |
| U [auth Q] | e5lqzQ1 | A: a/b three-layered sandwiches | X: Type II ABC importer transmembrane domain fold | H: DNA mismatch repair protein MutL regulatory subdomain | T: DNA mismatch repair protein MutL regulatory subdomain | F: | ECOD (v294.1) | |
| T [auth P] | e5lqzP1 | A: a/b three-layered sandwiches | X: Type II ABC importer transmembrane domain fold | H: DNA mismatch repair protein MutL regulatory subdomain | T: DNA mismatch repair protein MutL regulatory subdomain | F: | ECOD (v294.1) | |
| S [auth O] | e5lqzO1 | A: a/b three-layered sandwiches | X: Type II ABC importer transmembrane domain fold | H: DNA mismatch repair protein MutL regulatory subdomain | T: DNA mismatch repair protein MutL regulatory subdomain | F: | ECOD (v294.1) | |
| R [auth N] | e5lqzN1 | A: a/b three-layered sandwiches | X: Type II ABC importer transmembrane domain fold | H: DNA mismatch repair protein MutL regulatory subdomain | T: DNA mismatch repair protein MutL regulatory subdomain | F: | ECOD (v294.1) | |
| Q [auth M] | e5lqzM1 | A: a/b three-layered sandwiches | X: Type II ABC importer transmembrane domain fold | H: DNA mismatch repair protein MutL regulatory subdomain | T: DNA mismatch repair protein MutL regulatory subdomain | F: | ECOD (v294.1) | |
| P [auth L] | e5lqzL1 | A: a/b three-layered sandwiches | X: Type II ABC importer transmembrane domain fold | H: DNA mismatch repair protein MutL regulatory subdomain | T: DNA mismatch repair protein MutL regulatory subdomain | F: | ECOD (v294.1) | |
| O [auth K] | e5lqzK1 | A: a/b three-layered sandwiches | X: Type II ABC importer transmembrane domain fold | H: DNA mismatch repair protein MutL regulatory subdomain | T: DNA mismatch repair protein MutL regulatory subdomain | F: | ECOD (v294.1) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| L [auth H] | PF21334 | Fungal epsilon subunit of F1F0-ATP synthase C-terminal domain (ATPD_C_fung) | Fungal epsilon subunit of F1F0-ATP synthase C-terminal domain | F-type ATPases consist of two structural domains, F1 containing the extramembraneous catalytic core, and F0 which contains the membrane proton channel. This entry includes ATP synthase subunit delta from fungi (called epsilon in bacteria or chloropla ... | Domain |
| K [auth G] | PF00231 | ATP synthase (ATP-synt) | ATP synthase | Domain | |
| H [auth D], I [auth E], J [auth F] | PF00006 | ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab) | ATP synthase alpha/beta family, nucleotide-binding domain | This entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho. | Domain |
| H [auth D], I [auth E], J [auth F] | PF22919 | C-terminal domain of V and A type ATP synthase (ATP-synt_VA_C) | C-terminal domain of V and A type ATP synthase | This entry represents a small alpha helical domain found at the C-terminus of a variety of ATP synthases. | Domain |
| H [auth D], I [auth E], J [auth F] | PF02874 | ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N) | ATP synthase alpha/beta family, beta-barrel domain | This family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella. | Domain |
| E [auth A], F [auth B], G [auth C] | PF00006 | ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab) | ATP synthase alpha/beta family, nucleotide-binding domain | This entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho. | Domain |
| E [auth A], F [auth B], G [auth C] | PF00306 | ATP synthase alpha/beta chain, C terminal domain (ATP-synt_ab_C) | ATP synthase alpha/beta chain, C terminal domain | Domain | |
| E [auth A], F [auth B], G [auth C] | PF02874 | ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N) | ATP synthase alpha/beta family, beta-barrel domain | This family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella. | Domain |
| Y [auth U] | PF00213 | ATP synthase delta (OSCP) subunit (OSCP) | ATP synthase delta (OSCP) subunit | - | Family |
| PF00137 | ATP synthase subunit C (ATP-synt_C) | ATP synthase subunit C | This domain is found in the subunit c of ATP synthases and similar sequences from all cellular organisms. It forms two alpha-helices [1-4]. | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
| Chains | External Link | Comment |
|---|---|---|
| PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
| Chains | External Link | Comment |
|---|---|---|
| MemProtMD | Annotated as membrane protein by MemProtMD |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
| Chains | Resource Link | Group | Subgroup | Protein |
|---|---|---|---|---|
| mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | F-type ATPase | ATP synthase (F-ATPase), State 1 |














