5KCS | pdb_00005kcs

Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Evernimycin, mRNA, TetM and P-site tRNA at 3.9A resolution


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
I [auth 1I]SCOP2B SuperfamilyRibosomal protein L9 C-domain 8032958 3000329 SCOP2B (2022-06-29)
I [auth 1I]SCOP2B SuperfamilyL9 N-domain-like 8032960 3000338 SCOP2B (2022-06-29)
G [auth 1H]SCOP2B SuperfamilyRibosomal protein L6 8035397 3000724 SCOP2B (2022-06-29)
G [auth 1H]SCOP2B SuperfamilyRibosomal protein L6 8035398 3000724 SCOP2B (2022-06-29)
F [auth 1G]SCOP2B SuperfamilyRL5-like 8096352 3001709 SCOP2B (2022-06-29)
CB [auth 1u]SCOP2B SuperfamilyRibosomal protein S21 8053090 3002159 SCOP2B (2022-06-29)
AB [auth 1s]SCOP2B SuperfamilyRibosomal protein S19 8103915 3000686 SCOP2B (2022-06-29)
YA [auth 1q]SCOP2B SuperfamilyNucleic acid-binding proteins 8059276 3000135 SCOP2B (2022-06-29)
XA [auth 1p]SCOP2B SuperfamilyRibosomal protein S16 8106547 3000680 SCOP2B (2022-06-29)
E [auth 1F]SCOP2B SuperfamilyRibosomal protein L4 8096356 3001146 SCOP2B (2022-06-29)
WA [auth 1o]SCOP2B SuperfamilyS15/NS1 RNA-binding domain 8032375 3001284 SCOP2B (2022-06-29)
VA [auth 1n]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052568 3000068 SCOP2B (2022-06-29)
UA [auth 1m]SCOP2B SuperfamilyS13-like H2TH domain 8098358 3000053 SCOP2B (2022-06-29)
TA [auth 1l]SCOP2B SuperfamilyNucleic acid-binding proteins 8106545 3000135 SCOP2B (2022-06-29)
SA [auth 1k]SCOP2B SuperfamilyTranslational machinery components 8035368 3000571 SCOP2B (2022-06-29)
RA [auth 1j]SCOP2B SuperfamilyRibosomal protein S10 8102681 3001336 SCOP2B (2022-06-29)
QA [auth 1i]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8082661 3000100 SCOP2B (2022-06-29)
PA [auth 1h]SCOP2B SuperfamilyRibosomal protein S8 8079059 3000709 SCOP2B (2022-06-29)
OA [auth 1g]SCOP2B SuperfamilyRibosomal protein S7 8077979 3000799 SCOP2B (2022-06-29)
NA [auth 1f]SCOP2B SuperfamilyRibosomal protein S6 8066495 3001323 SCOP2B (2022-06-29)
D [auth 1E]SCOP2B SuperfamilyTranslational proteins 8032955 3000811 SCOP2B (2022-06-29)
LA [auth 1d]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8083400 3001473 SCOP2B (2022-06-29)
JA [auth 1b]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8063838 3001397 SCOP2B (2022-06-29)
HA [auth 19]SCOP2B SuperfamilyRibosomal protein L36 8035391 3001346 SCOP2B (2022-06-29)
GA [auth 18]SCOP2B SuperfamilyL35p-like 8035388 3000790 SCOP2B (2022-06-29)
EA [auth 16]SCOP2B SuperfamilyZn-binding ribosomal proteins 8096362 3001320 SCOP2B (2022-06-29)
DA [auth 15]SCOP2B SuperfamilyZn-binding ribosomal proteins 8096380 3001320 SCOP2B (2022-06-29)
C [auth 1D]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8035393 3000334 SCOP2B (2022-06-29)
C [auth 1D]SCOP2B SuperfamilyNucleic acid-binding proteins 8035394 3000135 SCOP2B (2022-06-29)
CA [auth 14]SCOP2B SuperfamilyL28p-like 8032740 3001966 SCOP2B (2022-06-29)
BA [auth 13]SCOP2B SuperfamilyRibosomal protein L30p/L7e 8096372 3001378 SCOP2B (2022-06-29)
AA [auth 12]SCOP2B SuperfamilyRibosomal protein L29 (L29p) 8096370 3000713 SCOP2B (2022-06-29)
Z [auth 11]SCOP2B SuperfamilyL28p-like 8035424 3001966 SCOP2B (2022-06-29)
Y [auth 10]SCOP2B SuperfamilyRibosomal L27 protein-like 8096338 3000539 SCOP2B (2022-06-29)
X [auth 1Z]SCOP2B SuperfamilyRibosomal protein L25-like 8042538 3001161 SCOP2B (2022-06-29)
W [auth 1Y]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8096358 3000334 SCOP2B (2022-06-29)
V [auth 1X]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8035415 3000210 SCOP2B (2022-06-29)
U [auth 1W]SCOP2B SuperfamilyRibosomal protein L22 8096336 3001078 SCOP2B (2022-06-29)
T [auth 1V]SCOP2B Superfamilyl21p-like 8096354 3002005 SCOP2B (2022-06-29)
S [auth 1U]SCOP2B SuperfamilyRibosomal protein L20 8096382 3000563 SCOP2B (2022-06-29)
R [auth 1T]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8096364 3000334 SCOP2B (2022-06-29)
Q [auth 1S]SCOP2B SuperfamilyTranslational machinery components 8032969 3000571 SCOP2B (2022-06-29)
P [auth 1R]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8035409 3000995 SCOP2B (2022-06-29)
O [auth 1Q]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8096366 3000884 SCOP2B (2022-06-29)
N [auth 1P]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8070553 3001045 SCOP2B (2022-06-29)
M [auth 1O]SCOP2B Superfamily50S Ribosomal protein L14-like 8103358 3000433 SCOP2B (2022-06-29)
L [auth 1N]SCOP2B SuperfamilyRibosomal protein L13 8096350 3001134 SCOP2B (2022-06-29)
K [auth 1K]SCOP2B SuperfamilyRibosomal L11/L12e N-terminal domain-like 8032963 3000950 SCOP2B (2022-06-29)
K [auth 1K]SCOP2B SuperfamilyRibosomal protein L11, C-terminal domain 8032961 3001186 SCOP2B (2022-06-29)
J [auth 1J]SCOP2B SuperfamilyRibosomal protein L10-like 8079773 3000665 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
I [auth 1I]Ribosomal_L9_Ne5kcs1I1 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: Ribosomal_L9_NECOD (1.6)
I [auth 1I]Ribosomal_L9_C_1e5kcs1I2 A: a+b two layersX: Ribosomal protein L9 C-domain (From Topology)H: Ribosomal protein L9 C-domain (From Topology)T: Ribosomal protein L9 C-domainF: Ribosomal_L9_C_1ECOD (1.6)
H [auth 1L]Ribosomal_L12e5kcs1L1 A: a+b two layersX: ClpS-likeH: ClpS-related (From Topology)T: ClpS-relatedF: Ribosomal_L12ECOD (1.6)
G [auth 1H]Ribosomal_L6e5kcs1H2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
G [auth 1H]Ribosomal_L6_1e5kcs1H1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_1ECOD (1.6)
F [auth 1G]Ribosomal_L5_Ce5kcs1G1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
EB [auth 1w]GTP_EFTU_D2e5kcs1w4 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: GTP_EFTU_D2ECOD (1.6)
EB [auth 1w]UNK_F_TYPEe5kcs1w2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: UNK_F_TYPEECOD (1.6)
EB [auth 1w]EFG_Ce5kcs1w5 A: a+b two layersX: Alpha-beta plaitsH: EF-G C-terminal domain-like (From Topology)T: EF-G C-terminal domain-likeF: EFG_CECOD (1.6)
EB [auth 1w]EFG_IIe5kcs1w3 A: a+b two layersX: Alpha-beta plaitsH: EF-G C-terminal domain-like (From Topology)T: EF-G C-terminal domain-likeF: EFG_IIECOD (1.6)
EB [auth 1w]MnmE_helical_2nde5kcs1w1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: MnmE_helical_2ndECOD (1.6)
CB [auth 1u]Ribosomal_S21e5kcs1u1 A: extended segmentsX: 30S ribosomal protein S21 (From Topology)H: 30S ribosomal protein S21 (From Topology)T: 30S ribosomal protein S21F: Ribosomal_S21ECOD (1.6)
BB [auth 1t]Ribosomal_S20pe5kcs1t1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: Ribosomal_S20pECOD (1.6)
AB [auth 1s]Ribosomal_S19e5kcs1s1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
ZA [auth 1r]Ribosomal_S18e5kcs1r1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
YA [auth 1q]Ribosomal_S17_1e5kcs1q1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
XA [auth 1p]Ribosomal_S16e5kcs1p1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16ECOD (1.6)
E [auth 1F]Ribosomal_L4e5kcs1F1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
WA [auth 1o]Ribosomal_S15_1e5kcs1o1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
VA [auth 1n]Ribosomal_S14_1e5kcs1n1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14_1ECOD (1.6)
UA [auth 1m]Ribosomal_S13_1e5kcs1m1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13_1ECOD (1.6)
TA [auth 1l]Ribosom_S12_S23e5kcs1l1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
SA [auth 1k]Ribosomal_S11e5kcs1k1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
RA [auth 1j]Ribosomal_S10e5kcs1j1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10ECOD (1.6)
QA [auth 1i]Ribosomal_S9e5kcs1i1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
PA [auth 1h]Ribosomal_S8_Ne5kcs1h1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_NECOD (1.6)
PA [auth 1h]Ribosomal_S8_Ce5kcs1h2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_CECOD (1.6)
OA [auth 1g]Ribosomal_S7_1e5kcs1g1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
NA [auth 1f]Ribosomal_S6e5kcs1f1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6ECOD (1.6)
D [auth 1E]Ribosomal_L3e5kcs1E1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
MA [auth 1e]Ribosomal_S5_Ce5kcs1e1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
MA [auth 1e]Ribosomal_S5e5kcs1e2 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5ECOD (1.6)
LA [auth 1d]S4e5kcs1d1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
KA [auth 1c]Ribosomal_S3_Ce5kcs1c2 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
KA [auth 1c]KH_2_1e5kcs1c1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_1ECOD (1.6)
JA [auth 1b]Ribosomal_S2e5kcs1b1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2ECOD (1.6)
HA [auth 19]Ribosomal_L36e5kcs191 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: Ribosomal_L36ECOD (1.6)
GA [auth 18]Ribosomal_L35pe5kcs181 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
FA [auth 17]Ribosomal_L34e5kcs171 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34ECOD (1.6)
EA [auth 16]Ribosomal_L33e5kcs161 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
DA [auth 15]Ribosomal_L32pe5kcs151 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L32pECOD (1.6)
C [auth 1D]Ribosomal_L2_1e5kcs1D1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
C [auth 1D]Ribosomal_L2_Ce5kcs1D2 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
CA [auth 14]Ribosomal_L31e5kcs141 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: Ribosomal_L31ECOD (1.6)
BA [auth 13]Ribosomal_L30e5kcs131 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
AA [auth 12]Ribosomal_L29e5kcs121 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29ECOD (1.6)
Z [auth 11]Ribosomal_L28e5kcs111 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: Ribosomal_L28ECOD (1.6)
Y [auth 10]Ribosomal_L27e5kcs101 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
X [auth 1Z]Ribosomal_L25pe5kcs1Z1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_L25pECOD (1.6)
W [auth 1Y]ribosomal_L24_1e5kcs1Y1 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24_1ECOD (1.6)
V [auth 1X]Ribosomal_L23_2e5kcs1X1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
U [auth 1W]Ribosomal_L22e5kcs1W1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
T [auth 1V]Ribosomal_L21pe5kcs1V1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
S [auth 1U]Ribosomal_L20e5kcs1U1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
R [auth 1T]Ribosomal_L19e5kcs1T1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
Q [auth 1S]Ribosomal_L18pe5kcs1S1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
P [auth 1R]Ribosomal_L17_1e5kcs1R1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17_1ECOD (1.6)
O [auth 1Q]Ribosomal_L16e5kcs1Q1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
N [auth 1P]Ribosomal_L27Ae5kcs1P1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
M [auth 1O]Ribosomal_L14e5kcs1O1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
L [auth 1N]Ribosomal_L13e5kcs1N1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
K [auth 1K]Ribosomal_L11e5kcs1K1 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: Ribosomal_L11ECOD (1.6)
K [auth 1K]Ribosomal_L11_Ne5kcs1K2 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: Ribosomal_L11_NECOD (1.6)
J [auth 1J]Ribosomal_L10e5kcs1J1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein L10-like (From Topology)T: Ribosomal protein L10-likeF: Ribosomal_L10ECOD (1.6)

AMR Gene: CARD Annotation CARD Database Homepage

ChainsAccessionShort NameDescriptionProvenance Source (Version)
EB [auth 1w]ARO:3000186tet(M)Tet(M) is a ribosomal protection protein that confers tetracycline resistance. It is found on transposable DNA elements and its horizontal transfer between bacterial species has been documented.CARD (4.0.1)

AMR Gene Family: CARD Annotation CARD Database Homepage

ChainsAccessionGene FamilyDrug Class Resistance MachanismProvenance Source (Version)
EB [auth 1w]ARO:0000002tetracycline-resistant ribosomal protection proteintetracycline antibioticantibiotic target protectionCARD (4.0.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
I [auth 1I]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
I [auth 1I]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domainDomain
I [auth 1I]PF03948Ribosomal protein L9, C-terminal domain (Ribosomal_L9_C)Ribosomal protein L9, C-terminal domainDomain
H [auth 1L]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. Domain
H [auth 1L]PF00542Ribosomal protein L7/L12 C-terminal domain (Ribosomal_L12)Ribosomal protein L7/L12 C-terminal domainDomain
G [auth 1H]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6Domain
G [auth 1H]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8Domain
F [auth 1G]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
F [auth 1G]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
E [auth 1F]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6Domain
E [auth 1F]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
D [auth 1E]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domainDomain
D [auth 1E]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
D [auth 1E]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domainDomain
HA [auth 19]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36Domain
GA [auth 18]PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
FA [auth 17]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
EA [auth 16]PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
DA [auth 15]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
C [auth 1D]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
C [auth 1D]PF00181Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)Ribosomal Proteins L2, RNA binding N-terminal domainDomain
C [auth 1D]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
C [auth 1D]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
CA [auth 14]PF01197Ribosomal protein L31 (Ribosomal_L31)Ribosomal protein L31- Family
BA [auth 13]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
AA [auth 12]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
Z [auth 11]PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
X [auth 1Z]PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress. Domain
W [auth 1Y]PF17136Large ribosomal subunit protein uL24, C-terminal domain (ribosomal_L24)Large ribosomal subunit protein uL24, C-terminal domainThis entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 m ...This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 makes very minor contributions to the biogenesis structure, and function of 60s ribosomal subunits [1]. However, RPL24 is essential to generate the first intermediate during 50s ribosomal subunits assembly [2]. RPL26 have an extra-ribosomal function to enhances p53 translation after DNA damage [3].
Domain
W [auth 1Y]PF00467KOW motif (KOW)KOW motif- Family
V [auth 1X]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
U [auth 1W]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
U [auth 1W]PF00009Elongation factor Tu GTP binding domain (GTP_EFTU)Elongation factor Tu GTP binding domainThis domain contains a P-loop motif, also found in several other families such as Pfam:PF00071, Pfam:PF00025 and Pfam:PF00063. Elongation factor Tu consists of three structural domains, this plus two C-terminal beta barrel domains. Domain
T [auth 1V]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
B [auth 1B]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
S [auth 1U]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
R [auth 1T]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
Q [auth 1S]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19Domain
P [auth 1R]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
P [auth 1R]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
O [auth 1Q]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
O [auth 1Q]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17Domain
N [auth 1P]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
N [auth 1P]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
M [auth 1O]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
M [auth 1O]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15Domain
L [auth 1N]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
L [auth 1N]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
K [auth 1K]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain. Domain
K [auth 1K]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domainDomain
K [auth 1K]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
J [auth 1J]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain
J [auth 1J]PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth 1I]50S ribosomal protein L9
H [auth 1L]50S ribosomal protein L7/L12
G [auth 1H]50S ribosomal protein L6
F [auth 1G]50S ribosomal protein L5
FB [auth 1x]P-site tRNA---
EB [auth 1w]Tetracycline resistance protein TetM from transposon Tn916 -
DB [auth 1v]mRNA---
CB [auth 1u]30S ribosomal protein S21
BB [auth 1t]30S ribosomal protein S20
AB [auth 1s]30S ribosomal protein S19
ZA [auth 1r]30S ribosomal protein S18
YA [auth 1q]30S ribosomal protein S17
XA [auth 1p]30S ribosomal protein S16
E [auth 1F]50S ribosomal protein L4
WA [auth 1o]30S ribosomal protein S15
VA [auth 1n]30S ribosomal protein S14
UA [auth 1m]30S ribosomal protein S13
TA [auth 1l]30S ribosomal protein S12
SA [auth 1k]30S ribosomal protein S11
RA [auth 1j]30S ribosomal protein S10
QA [auth 1i]30S ribosomal protein S9
PA [auth 1h]30S ribosomal protein S8
OA [auth 1g]30S ribosomal protein S7
NA [auth 1f]30S ribosomal protein S6
D [auth 1E]50S ribosomal protein L3
MA [auth 1e]30S ribosomal protein S5
LA [auth 1d]30S ribosomal protein S4
KA [auth 1c]30S ribosomal protein S3
JA [auth 1b]30S ribosomal protein S2
IA [auth 1a]16S Ribosomal RNA---
HA [auth 19]50S ribosomal protein L36
GA [auth 18]50S ribosomal protein L35
FA [auth 17]50S ribosomal protein L34
EA [auth 16]50S ribosomal protein L33
DA [auth 15]50S ribosomal protein L32
C [auth 1D]50S ribosomal protein L2
CA [auth 14]50S ribosomal protein L31
BA [auth 13]50S ribosomal protein L30
AA [auth 12]50S ribosomal protein L29
Z [auth 11]50S ribosomal protein L28
Y [auth 10]50S ribosomal protein L27
X [auth 1Z]50S ribosomal protein L25
W [auth 1Y]50S ribosomal protein L24
V [auth 1X]50S ribosomal protein L23
U [auth 1W]50S ribosomal protein L22
T [auth 1V]50S ribosomal protein L21
B [auth 1B]5S Ribosomal RNA---
S [auth 1U]50S ribosomal protein L20
R [auth 1T]50S ribosomal protein L19
Q [auth 1S]50S ribosomal protein L18
P [auth 1R]50S ribosomal protein L17
O [auth 1Q]50S ribosomal protein L16
N [auth 1P]50S ribosomal protein L15
M [auth 1O]50S ribosomal protein L14
L [auth 1N]50S ribosomal protein L13
K [auth 1K]50S ribosomal protein L11
J [auth 1J]50S ribosomal protein L10
A [auth 1A]23S Ribosomal RNA---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth 1I]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
I [auth 1I]IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
I [auth 1I]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
I [auth 1I]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
I [auth 1I]IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
I [auth 1I]IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
I [auth 1I]IPR000244Large ribosomal subunit protein bL9Family
H [auth 1L]IPR013823Large ribosomal subunit protein bL12, C-terminalDomain
H [auth 1L]IPR008932Large ribosomal subunit protein bL12, oligomerizationDomain
H [auth 1L]IPR036235Large ribosomal subunit protein bL12, oligomerization domain superfamilyHomologous Superfamily
H [auth 1L]IPR014719Ribosomal protein bL12, C-terminal/adaptor protein ClpS-likeHomologous Superfamily
H [auth 1L]IPR000206Large ribosomal subunit protein bL12Family
G [auth 1H]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
G [auth 1H]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
G [auth 1H]IPR000702Large ribosomal subunit protein uL6-likeFamily
G [auth 1H]IPR019906Large ribosomal subunit protein uL6, bacteriaFamily
G [auth 1H]IPR002358Large ribosomal subunit protein uL6, conserved siteConserved Site
F [auth 1G]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
F [auth 1G]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
F [auth 1G]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
F [auth 1G]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
F [auth 1G]IPR002132Large ribosomal subunit protein uL5Family
F [auth 1G]IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
EB [auth 1w]IPR005225Small GTP-binding domainDomain
EB [auth 1w]IPR005517Translation elongation factor EFG/EF2, domain IVDomain
EB [auth 1w]IPR035650Tetracycline resistance protein, C-terminalDomain
EB [auth 1w]IPR000795Translational (tr)-type GTP-binding domainDomain
EB [auth 1w]IPR000640Elongation factor EFG, domain V-likeDomain
EB [auth 1w]IPR031157Tr-type G domain, conserved siteConserved Site
EB [auth 1w]IPR035647EF-G domain III/V-likeHomologous Superfamily
EB [auth 1w]IPR053905Elongation factor G-like, domain IIDomain
EB [auth 1w]IPR041095Elongation Factor G, domain IIDomain
EB [auth 1w]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
EB [auth 1w]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
EB [auth 1w]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
EB [auth 1w]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
CB [auth 1u]IPR038380Small ribosomal subunit protein bS21 superfamilyHomologous Superfamily
CB [auth 1u]IPR018278Small ribosomal subunit protein bS21, conserved siteConserved Site
CB [auth 1u]IPR001911Small ribosomal subunit protein bS21Family
BB [auth 1t]IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
BB [auth 1t]IPR002583Small ribosomal subunit protein bS20Family
AB [auth 1s]IPR005732Small ribosomal subunit protein uS19, bacteriaFamily
AB [auth 1s]IPR002222Small ribosomal subunit protein uS19Family
AB [auth 1s]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
AB [auth 1s]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
ZA [auth 1r]IPR001648Small ribosomal subunit protein bS18Family
ZA [auth 1r]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
ZA [auth 1r]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
YA [auth 1q]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
YA [auth 1q]IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
YA [auth 1q]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
YA [auth 1q]IPR000266Small ribosomal subunit protein uS17Family
XA [auth 1p]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
XA [auth 1p]IPR000307Small ribosomal subunit protein bS16Family
XA [auth 1p]IPR020592Small ribosomal subunit protein bS16, conserved siteConserved Site
E [auth 1F]IPR013005Large ribosomal subunit protein uL4-likeFamily
E [auth 1F]IPR002136Large ribosomal subunit protein uL4Family
E [auth 1F]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
WA [auth 1o]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
WA [auth 1o]IPR000589Small ribosomal subunit protein uS15Family
WA [auth 1o]IPR005290Small ribosomal subunit protein uS15, bacteriaFamily
VA [auth 1n]IPR001209Small ribosomal subunit protein uS14Family
VA [auth 1n]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
VA [auth 1n]IPR023036Small ribosomal subunit protein uS14, bacteria/plastidFamily
UA [auth 1m]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
UA [auth 1m]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
UA [auth 1m]IPR001892Small ribosomal subunit protein uS13Family
UA [auth 1m]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
UA [auth 1m]IPR019980Small ribosomal subunit protein uS13, bacteriaFamily
TA [auth 1l]IPR005679Ribosomal protein uS12, bacteriaFamily
TA [auth 1l]IPR006032Small ribosomal subunit protein uS12Family
TA [auth 1l]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
SA [auth 1k]IPR001971Small ribosomal subunit protein uS11Family
SA [auth 1k]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
SA [auth 1k]IPR019981Small ribosomal subunit protein uS11, bacteriaFamily
SA [auth 1k]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
RA [auth 1j]IPR027486Small ribosomal subunit protein uS10 domainDomain
RA [auth 1j]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
RA [auth 1j]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
RA [auth 1j]IPR001848Small ribosomal subunit protein uS10Family
QA [auth 1i]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
QA [auth 1i]IPR023035Small ribosomal subunit protein uS9, bacteria/plastidFamily
QA [auth 1i]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
QA [auth 1i]IPR000754Small ribosomal subunit protein uS9Family
QA [auth 1i]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
PA [auth 1h]IPR000630Small ribosomal subunit protein uS8Family
PA [auth 1h]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
PA [auth 1h]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
OA [auth 1g]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
OA [auth 1g]IPR005717Small ribosomal subunit protein uS7, bacteria/organellaFamily
OA [auth 1g]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
OA [auth 1g]IPR000235Small ribosomal subunit protein uS7Family
OA [auth 1g]IPR023798Small ribosomal subunit protein uS7 domainDomain
NA [auth 1f]IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
NA [auth 1f]IPR000529Small ribosomal subunit protein bS6Family
NA [auth 1f]IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
NA [auth 1f]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
NA [auth 1f]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
D [auth 1E]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
D [auth 1E]IPR019927Large ribosomal subunit protein uL3, bacteria/organellaFamily
D [auth 1E]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
D [auth 1E]IPR000597Large ribosomal subunit protein uL3Family
MA [auth 1e]IPR000851Small ribosomal subunit protein uS5Family
MA [auth 1e]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
MA [auth 1e]IPR005712Small ribosomal subunit protein uS5, bacteriaFamily
MA [auth 1e]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
MA [auth 1e]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
MA [auth 1e]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
MA [auth 1e]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
LA [auth 1d]IPR002942RNA-binding S4 domainDomain
LA [auth 1d]IPR022801Small ribosomal subunit protein uS4Family
LA [auth 1d]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
LA [auth 1d]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
LA [auth 1d]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
LA [auth 1d]IPR005709Small ribosomal subunit protein uS4, bacteriaFamily
KA [auth 1c]IPR005704Small ribosomal subunit protein uS3, bacteriaFamily
KA [auth 1c]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
KA [auth 1c]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
KA [auth 1c]IPR004087K Homology domainDomain
KA [auth 1c]IPR004044K Homology domain, type 2Domain
KA [auth 1c]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
KA [auth 1c]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
KA [auth 1c]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
JA [auth 1b]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
JA [auth 1b]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
JA [auth 1b]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
JA [auth 1b]IPR001865Small ribosomal subunit protein uS2Family
HA [auth 19]IPR000473Large ribosomal subunit protein bL36Family
HA [auth 19]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
GA [auth 18]IPR021137Large ribosomal subunit protein bL35-likeFamily
GA [auth 18]IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
GA [auth 18]IPR001706Large ribosomal subunit protein bL35Family
GA [auth 18]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
FA [auth 17]IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
FA [auth 17]IPR000271Large ribosomal subunit protein bL34Family
EA [auth 16]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
EA [auth 16]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
EA [auth 16]IPR001705Large ribosomal subunit protein bL33Family
EA [auth 16]IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
DA [auth 15]IPR002677Large ribosomal subunit protein bL32Family
DA [auth 15]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
DA [auth 15]IPR044957Large ribosomal subunit protein bL32, bacteriaFamily
C [auth 1D]IPR005880Large ribosomal subunit protein uL2, bacteria/organellaFamily
C [auth 1D]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
C [auth 1D]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
C [auth 1D]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
C [auth 1D]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
C [auth 1D]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
C [auth 1D]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
C [auth 1D]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
C [auth 1D]IPR002171Large ribosomal subunit protein uL2Family
CA [auth 14]IPR002150Large ribosomal subunit protein bL31 type A/BFamily
CA [auth 14]IPR027491Large ribosomal subunit protein bL31 type AFamily
CA [auth 14]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
CA [auth 14]IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
BA [auth 13]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
BA [auth 13]IPR005996Large ribosomal subunit protein uL30, bacteriaFamily
BA [auth 13]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
BA [auth 13]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
AA [auth 12]IPR050063Universal ribosomal protein uL29Family
AA [auth 12]IPR001854Large ribosomal subunit protein uL29Family
AA [auth 12]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
AA [auth 12]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
Z [auth 11]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
Z [auth 11]IPR001383Large ribosomal subunit protein bL28, bacteriaFamily
Z [auth 11]IPR026569Large ribosomal subunit protein bL28Family
Z [auth 11]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
Y [auth 10]IPR001684Large ribosomal subunit protein bL27Family
Y [auth 10]IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
X [auth 1Z]IPR020055Ribosomal protein bL25, short-formFamily
X [auth 1Z]IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
X [auth 1Z]IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
X [auth 1Z]IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
X [auth 1Z]IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
W [auth 1Y]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
W [auth 1Y]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
W [auth 1Y]IPR003256Large ribosomal subunit protein uL24Family
W [auth 1Y]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
W [auth 1Y]IPR005824KOWDomain
W [auth 1Y]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
V [auth 1X]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
V [auth 1X]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
V [auth 1X]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
V [auth 1X]IPR013025Large ribosomal subunit protein uL23-likeFamily
U [auth 1W]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
U [auth 1W]IPR001063Large ribosomal subunit protein uL22Family
U [auth 1W]IPR047867Large ribosomal subunit protein uL22, bacteria/organellaFamily
U [auth 1W]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
U [auth 1W]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
T [auth 1V]IPR028909Large ribosomal subunit protein bL21-likeFamily
T [auth 1V]IPR001787Large ribosomal subunit protein bL21Family
T [auth 1V]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
T [auth 1V]IPR018258Large ribosomal subunit protein bL21, conserved siteConserved Site
S [auth 1U]IPR049946Large ribosomal subunit protein bL20, conserved siteConserved Site
S [auth 1U]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
S [auth 1U]IPR005813Large ribosomal subunit protein bL20Family
R [auth 1T]IPR001857Large ribosomal subunit protein bL19Family
R [auth 1T]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
R [auth 1T]IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
R [auth 1T]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
Q [auth 1S]IPR005484Large ribosomal subunit protein uL18, bacterial/plantae/animaliaFamily
Q [auth 1S]IPR004389Large ribosomal subunit protein uL18, bacteriaFamily
P [auth 1R]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
P [auth 1R]IPR047859Large ribosomal subunit protein bL17, conserved siteConserved Site
P [auth 1R]IPR000456Large ribosomal subunit protein bL17Family
O [auth 1Q]IPR000114Large ribosomal subunit protein uL16, bacteriaFamily
O [auth 1Q]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
O [auth 1Q]IPR020798Large ribosomal subunit protein uL16, conserved siteConserved Site
O [auth 1Q]IPR016180Large ribosomal subunit protein uL16 domainDomain
O [auth 1Q]IPR047873Large ribosomal subunit protein uL16Family
N [auth 1P]IPR021131Large ribosomal subunit protein uL15/eL18Domain
N [auth 1P]IPR030878Large ribosomal subunit protein uL15Family
N [auth 1P]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
N [auth 1P]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
N [auth 1P]IPR005749Large ribosomal subunit protein uL15, bacteriaFamily
M [auth 1O]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
M [auth 1O]IPR000218Large ribosomal subunit protein uL14Family
M [auth 1O]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
M [auth 1O]IPR005745Large ribosomal subunit protein uL14, bacteriaFamily
L [auth 1N]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
L [auth 1N]IPR005822Large ribosomal subunit protein uL13Family
L [auth 1N]IPR005823Large ribosomal subunit protein uL13, bacteriaFamily
L [auth 1N]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
K [auth 1K]IPR020785Large ribosomal subunit protein uL11, conserved siteConserved Site
K [auth 1K]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
K [auth 1K]IPR000911Ribosomal protein uL11Family
K [auth 1K]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
K [auth 1K]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
K [auth 1K]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
K [auth 1K]IPR006519Large ribosomal subunit protein uL11, bacteriaFamily
J [auth 1J]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
J [auth 1J]IPR001790Large ribosomal subunit protein uL10Family
J [auth 1J]IPR047865Large ribosomal subunit protein uL10, bacteria/organellaFamily
J [auth 1J]IPR002363Large ribosomal subunit protein uL10, conserved site, bacteriaConserved Site
J [auth 1J]IPR022973Large ribosomal subunit protein uL10, bacteriaFamily