Annotations: 5K8J

Structure of Caulobacter crescentus VapBC1 (apo form)

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C		e5k8jC1	A: alpha arrays	X: F-type ATP synthase subunit b	H: Bacterial cell wall synthesis membrane enzyme MraY-related	T: Bacterial cell wall synthesis membrane enzyme MraY-related	F:	ECOD (v295.2)
B		e5k8jB1	A: alpha arrays	X: F-type ATP synthase subunit b	H: Bacterial cell wall synthesis membrane enzyme MraY-related	T: Bacterial cell wall synthesis membrane enzyme MraY-related	F:	ECOD (v295.2)
D	Glyco_hydro_43	e5k8jD1	A: alpha arrays	X: Reverse ferredoxin	H: beta-propeller	T: 5-bladed	F: Glyco_hydro_43	ECOD (v295.2)
A	Peptidase_M60	e5k8jA1	A: alpha arrays	X: beta-propeller-like	H: beta-propeller	T: 7-bladed	F: Peptidase_M60	ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
C	3.40.50.1010	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	5'-nuclease	CATH (4.3.0)
B	3.40.50.1010	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	5'-nuclease	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B, C	PF01850	PIN domain (PIN)	PIN domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B, C	Ribonuclease VapC	cation binding magnesium ion binding ion binding binding metal ion binding small molecule binding nuclease activity catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA nuclease activity catalytic activity	-	-
A, D	VapB family protein	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B, C	IPR002716	PIN domain	Domain
B, C	IPR029060	PIN-like domain superfamily	Homologous Superfamily
B, C	IPR022907	VapC family	Family
B, C	IPR050556	Type II toxin-antitoxin system RNase	Family
A, D	IPR037914	SpoVT-AbrB domain superfamily	Homologous Superfamily

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