5JX5 | pdb_00005jx5

GH6 Orpinomyces sp. Y102 enzyme

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d5jx5d_	Alpha and beta proteins (a/b)	7-stranded beta/alpha barrel	Glycosyl hydrolases family 6, cellulases	automated matches	automated matches	(Orpinomyces sp. Y102 ) [TaxId: 884017 ],	SCOPe (2.08)
C	d5jx5c_	Alpha and beta proteins (a/b)	7-stranded beta/alpha barrel	Glycosyl hydrolases family 6, cellulases	automated matches	automated matches	(Orpinomyces sp. Y102 ) [TaxId: 884017 ],	SCOPe (2.08)
B	d5jx5b_	Alpha and beta proteins (a/b)	7-stranded beta/alpha barrel	Glycosyl hydrolases family 6, cellulases	automated matches	automated matches	(Orpinomyces sp. Y102 ) [TaxId: 884017 ],	SCOPe (2.08)
A	d5jx5a_	Alpha and beta proteins (a/b)	7-stranded beta/alpha barrel	Glycosyl hydrolases family 6, cellulases	automated matches	automated matches	(Orpinomyces sp. Y102 ) [TaxId: 884017 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	Glycosyl hydrolases family 6, cellulases	8073543	3001060	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Glycosyl hydrolases family 6, cellulases	8073543	3001060	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Glycosyl hydrolases family 6, cellulases	8073543	3001060	SCOP2B (2022-06-29)
A	SCOP2 Family	Glycosyl hydrolases family 6, cellulases	8073542	4003563	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Glycosyl hydrolases family 6, cellulases	8073543	3001060	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	Glyco_hydro_6	e5jx5D1	A: a/b barrels	X: TIM beta/alpha-barrel	H: Cellulases (From Topology)	T: Cellulases	F: Glyco_hydro_6	ECOD (1.6)
C	Glyco_hydro_6	e5jx5C1	A: a/b barrels	X: TIM beta/alpha-barrel	H: Cellulases (From Topology)	T: Cellulases	F: Glyco_hydro_6	ECOD (1.6)
B	Glyco_hydro_6	e5jx5B1	A: a/b barrels	X: TIM beta/alpha-barrel	H: Cellulases (From Topology)	T: Cellulases	F: Glyco_hydro_6	ECOD (1.6)
A	Glyco_hydro_6	e5jx5A1	A: a/b barrels	X: TIM beta/alpha-barrel	H: Cellulases (From Topology)	T: Cellulases	F: Glyco_hydro_6	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	3.20.20.40	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	1, 4-beta cellobiohydrolase	CATH (4.3.0)
C	3.20.20.40	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	1, 4-beta cellobiohydrolase	CATH (4.3.0)
B	3.20.20.40	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	1, 4-beta cellobiohydrolase	CATH (4.3.0)
A	3.20.20.40	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	1, 4-beta cellobiohydrolase	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF01341	Glycosyl hydrolases family 6 (Glyco_hydro_6)	Glycosyl hydrolases family 6		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Glucanase	hydrolase activity, acting on glycosyl bonds hydrolase activity, hydrolyzing O-glycosyl compounds hydrolase activity catalytic activity	carbohydrate metabolic process catabolic process glucan catabolic process beta-glucan metabolic process carbohydrate catabolic process primary metabolic process macromolecule catabolic process polysaccharide metabolic process glucan metabolic process beta-glucan catabolic process polysaccharide catabolic process metabolic process cellular process cellulose catabolic process carbohydrate metabolic process catabolic process glucan catabolic process beta-glucan metabolic process carbohydrate catabolic process primary metabolic process macromolecule catabolic process polysaccharide metabolic process glucan metabolic process beta-glucan catabolic process polysaccharide catabolic process metabolic process cellular process cellulose catabolic process macromolecule metabolic process cellulose metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR016288	1, 4-beta cellobiohydrolase	Family
A, B, C, D	IPR036434	1, 4-beta cellobiohydrolase superfamily	Homologous Superfamily
A, B, C, D	IPR009034	Fungal dockerin domain superfamily	Homologous Superfamily
A, B, C, D	IPR002883	CBM10/dockerin domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.