5JMC
Receptor binding domain of Botulinum neurotoxin A in complex with rat SV2C
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Concanavalin A-like lectins/glucanases | 8041451 | 3000120 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | STI-like | 8042037 | 3000715 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Concanavalin A-like lectins/glucanases | 8041451 | 3000120 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | STI-like | 8042037 | 3000715 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Concanavalin A-like lectins/glucanases | 8041451 | 3000120 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | STI-like | 8042037 | 3000715 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | STI-like | 8042037 | 3000715 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | Concanavalin A-like lectins/glucanases | 8041451 | 3000120 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF07953 | e5jmcA2 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Concanavalin A-like lectins/glucanases | F: PF07953 | ECOD (1.6) |
A | PF07951 | e5jmcA1 | A: beta duplicates or obligate multimers | X: beta-Trefoil (From Topology) | H: beta-Trefoil (From Topology) | T: beta-Trefoil | F: PF07951 | ECOD (1.6) |
C | PF07953 | e5jmcC1 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Concanavalin A-like lectins/glucanases | F: PF07953 | ECOD (1.6) |
C | PF07951 | e5jmcC2 | A: beta duplicates or obligate multimers | X: beta-Trefoil (From Topology) | H: beta-Trefoil (From Topology) | T: beta-Trefoil | F: PF07951 | ECOD (1.6) |
E | PF07953 | e5jmcE2 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Concanavalin A-like lectins/glucanases | F: PF07953 | ECOD (1.6) |
E | PF07951 | e5jmcE1 | A: beta duplicates or obligate multimers | X: beta-Trefoil (From Topology) | H: beta-Trefoil (From Topology) | T: beta-Trefoil | F: PF07951 | ECOD (1.6) |
G | PF07953 | e5jmcG1 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Concanavalin A-like lectins/glucanases | F: PF07953 | ECOD (1.6) |
G | PF07951 | e5jmcG2 | A: beta duplicates or obligate multimers | X: beta-Trefoil (From Topology) | H: beta-Trefoil (From Topology) | T: beta-Trefoil | F: PF07951 | ECOD (1.6) |
B | PF13599 | e5jmcB1 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Pentapeptide repeats (From Topology) | T: Pentapeptide repeats | F: PF13599 | ECOD (1.6) |
D | PF13599 | e5jmcD1 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Pentapeptide repeats (From Topology) | T: Pentapeptide repeats | F: PF13599 | ECOD (1.6) |
F | PF13599 | e5jmcF1 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Pentapeptide repeats (From Topology) | T: Pentapeptide repeats | F: PF13599 | ECOD (1.6) |
H | PF13599 | e5jmcH1 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Pentapeptide repeats (From Topology) | T: Pentapeptide repeats | F: PF13599 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF07951 | Clostridium neurotoxin, C-terminal receptor binding (Toxin_R_bind_C) | Clostridium neurotoxin, C-terminal receptor binding | The Clostridium neurotoxin family is composed of tetanus neurotoxins and seven serotypes of botulinum neurotoxin. The structure of the botulinum neurotoxin reveals a four domain protein. The N-terminal catalytic domain (Pfam:PF01742), the central tr ... | Domain | |
PF07953 | Clostridium neurotoxin, N-terminal receptor binding (Toxin_R_bind_N) | Clostridium neurotoxin, N-terminal receptor binding | The Clostridium neurotoxin family is composed of tetanus neurotoxin and seven serotypes of botulinum neurotoxin. The structure of the botulinum neurotoxin reveals a four domain protein. The N-terminal catalytic domain (Pfam:PF01742), the central tra ... | Domain | |
PF13599 | Pentapeptide repeats (9 copies) (Pentapeptide_4) | Pentapeptide repeats (9 copies) | - | Repeat |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000395 | Botulinum/Tetanus toxin, catalytic chain | Domain | |
IPR012928 | Clostridium neurotoxin, receptor binding N-terminal | Domain | |
IPR012500 | Clostridium neurotoxin, translocation | Domain | |
IPR011065 | Kunitz inhibitor STI-like superfamily | Homologous Superfamily | |
IPR013104 | Clostridium neurotoxin, receptor-binding C-terminal | Domain | |
IPR013320 | Concanavalin A-like lectin/glucanase domain superfamily | Homologous Superfamily | |
IPR036248 | Clostridium neurotoxin, translocation domain | Homologous Superfamily | |
IPR022308 | Synaptic vesicle protein SV2 | Family | |
IPR011701 | Major facilitator superfamily | Family | |
IPR005828 | Major facilitator, sugar transporter-like | Family | |
IPR005829 | Sugar transporter, conserved site | Conserved Site | |
IPR001646 | Pentapeptide repeat | Repeat | |
IPR036259 | MFS transporter superfamily | Homologous Superfamily | |
IPR020846 | Major facilitator superfamily domain | Domain |