Structure of translation elongation factor P from Acinetobacter baumannii
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | EFP | e5j3bB2 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: EFP | ECOD (1.6) |
| B | Elong-fact-P_C | e5j3bB3 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: Elong-fact-P_C | ECOD (1.6) |
| B | EFP_N | e5j3bB1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: EFP_N | ECOD (1.6) |
| A | EFP | e5j3bA1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: EFP | ECOD (1.6) |
| A | Elong-fact-P_C | e5j3bA2 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: Elong-fact-P_C | ECOD (1.6) |
| A | EFP_N | e5j3bA3 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: EFP_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 2.30.30.30 | Mainly Beta | Roll | SH3 type barrels. | CATH (4.2.0) | |
| B | 2.40.50.140 | Mainly Beta | Beta Barrel | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | Nucleic acid-binding proteins | CATH (4.2.0) |
| A | 2.30.30.30 | Mainly Beta | Roll | SH3 type barrels. | CATH (4.2.0) | |
| A | 2.40.50.140 | Mainly Beta | Beta Barrel | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | Nucleic acid-binding proteins | CATH (4.2.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Elongation factor P |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR011768 | Translation elongation factor P | Family | |
| IPR020599 | Translation elongation factor P/YeiP | Family | |
| IPR015365 | Elongation factor P, C-terminal | Domain | |
| IPR012340 | Nucleic acid-binding, OB-fold | Homologous Superfamily | |
| IPR013185 | Translation elongation factor, KOW-like | Domain | |
| IPR014722 | Large ribosomal subunit protein uL2, domain 2 | Homologous Superfamily | |
| IPR008991 | Translation protein SH3-like domain superfamily | Homologous Superfamily | |
| IPR001059 | Translation elongation factor P/YeiP, central | Domain |
