Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyLptD-like barrel8053498 3002195 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyLptD-like barrel8053498 3002195 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyTolB N-terminal domain-like8053482 3000482 SCOP2B (2022-06-29)
DSCOP2 FamilyLptE-like8045855 4004725 SCOP2 (2022-06-29)
DSCOP2 SuperfamilyTolB N-terminal domain-like8053482 3000482 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF04453e5iv8A1 A: beta barrelsX: Outer membrane meander beta-barrelsH: LPS-assembly protein LptD (From Topology)T: LPS-assembly protein LptDF: PF04453ECOD (1.6)
CPF04453e5iv8C1 A: beta barrelsX: Outer membrane meander beta-barrelsH: LPS-assembly protein LptD (From Topology)T: LPS-assembly protein LptDF: PF04453ECOD (1.6)
BPF04390e5iv8B1 A: a/b three-layered sandwichesX: TolB, N-terminal domain (From Topology)H: TolB, N-terminal domain (From Topology)T: TolB, N-terminal domainF: PF04390ECOD (1.6)
DPF04390e5iv8D1 A: a/b three-layered sandwichesX: TolB, N-terminal domain (From Topology)H: TolB, N-terminal domain (From Topology)T: TolB, N-terminal domainF: PF04390ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.30.160.150 Alpha Beta 2-Layer Sandwich Double Stranded RNA Binding Domain Lipoprotein like domainCATH (4.3.0)
D3.30.160.150 Alpha Beta 2-Layer Sandwich Double Stranded RNA Binding Domain Lipoprotein like domainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, C
PF04453LPS transport system D (LptD)LPS transport system D- Family
B, D
PF04390Lipopolysaccharide-assembly (LptE)Lipopolysaccharide-assembly- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, C
LPS biosynthesis protein-
B, D
LPS-assembly lipoprotein LptE-

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
A, B, C, D
PDBTMAnnotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage