Annotations: 5ITS

Crystal structure of LOG from Corynebacterium glutamicum

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d5itsa_	Alpha and beta proteins (a/b)	MCP/YpsA-like	MCP/YpsA-like	automated matches	automated matches	(Corynebacterium glutamicum ATCC 13032 ) [TaxId: 196627 ],	SCOPe (2.08)
B	d5itsb1	Alpha and beta proteins (a/b)	MCP/YpsA-like	MCP/YpsA-like	automated matches	automated matches	(Corynebacterium glutamicum ATCC 13032 ) [TaxId: 196627 ],	SCOPe (2.08)
B	d5itsb2	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Corynebacterium glutamicum ATCC 13032 ) [TaxId: 196627 ],	SCOPe (2.08)
D	d5itsd1	Alpha and beta proteins (a/b)	MCP/YpsA-like	MCP/YpsA-like	automated matches	automated matches	(Corynebacterium glutamicum ATCC 13032 ) [TaxId: 196627 ],	SCOPe (2.08)
D	d5itsd2	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Corynebacterium glutamicum ATCC 13032 ) [TaxId: 196627 ],	SCOPe (2.08)
C	d5itsc_	Alpha and beta proteins (a/b)	MCP/YpsA-like	MCP/YpsA-like	automated matches	automated matches	(Corynebacterium glutamicum ATCC 13032 ) [TaxId: 196627 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	MCP/YpsA-like	8061793	3000672	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	MCP/YpsA-like	8061793	3000672	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	MCP/YpsA-like	8061793	3000672	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	MCP/YpsA-like	8061793	3000672	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Lipocalin_7	e5itsA1	A: a/b three-layered sandwiches	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: Lipocalin_7	ECOD (v294.1)
B	Lipocalin_7	e5itsB1	A: a/b three-layered sandwiches	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: Lipocalin_7	ECOD (v294.1)
D	Lipocalin_7	e5itsD1	A: a/b three-layered sandwiches	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: Lipocalin_7	ECOD (v294.1)
C	Lipocalin_7	e5itsC1	A: a/b three-layered sandwiches	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: Lipocalin_7	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.40.50.450	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold		CATH (4.3.0)
B	3.40.50.450	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold		CATH (4.3.0)
D	3.40.50.450	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold		CATH (4.3.0)
C	3.40.50.450	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF03641	Possible lysine decarboxylase (Lysine_decarbox)	Possible lysine decarboxylase	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Cytokinin riboside 5'-monophosphate phosphoribohydrolase	cytokinin riboside 5'-monophosphate phosphoribohydrolase activity hydrolase activity, acting on glycosyl bonds hydrolase activity hydrolase activity, hydrolyzing N-glycosyl compounds catalytic activity binding nucleoside phosphate binding nucleotide binding heterocyclic compound binding small molecule binding	cytokinin metabolic process regulation of hormone levels biological regulation cytokinin biosynthetic process hormone metabolic process amine metabolic process biosynthetic process metabolic process cellular process regulation of biological quality hormone biosynthetic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR005269	Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG	Family
A, B, C, D	IPR031100	LOG family	Family

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