5ICA
Structure of the CTD complex of UTP12, Utp13, Utp1 and Utp21
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Dip2/Utp12-like | 8045116 | 4004299 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | UTPB complex component-like | 8056019 | 3002330 | SCOP2 (2022-06-29) |
B | SCOP2 Family | Utp13-like | 8051063 | 4007179 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | UTPB complex component-like | 8056022 | 3002330 | SCOP2 (2022-06-29) |
C | SCOP2 Family | Utp21-like | 8045539 | 4004524 | SCOP2 (2022-06-29) |
C | SCOP2 Superfamily | UTPB complex component-like | 8056021 | 3002330 | SCOP2 (2022-06-29) |
D | SCOP2 Family | Dip2/Utp12-like | 8045117 | 4004299 | SCOP2 (2022-06-29) |
D | SCOP2 Superfamily | UTPB complex component-like | 8056020 | 3002330 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF04003 | e5icaA1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 (From Topology) | T: C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 | F: PF04003 | ECOD (1.6) |
B | PF08625 | e5icaB1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 (From Topology) | T: C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 | F: PF08625 | ECOD (1.6) |
C | PF04192 | e5icaC1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 (From Topology) | T: C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 | F: PF04192 | ECOD (1.6) |
D | PF04003 | e5icaD1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 (From Topology) | T: C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 | F: PF04003 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF04003 | Dip2/Utp12 Family (Utp12) | Dip2/Utp12 Family | - | Family | |
PF08625 | Utp13 specific WD40 associated domain (Utp13) | Utp13 specific WD40 associated domain | Utp13 is a component of the five protein Pwp2 complex that forms part of a stable particle subunit independent of the U3 small nucleolar ribonucleoprotein that is essential for the initial assembly steps of the 90S pre-ribosome [1]. Pwp2 is capable o ... | Domain | |
PF04192 | Utp21 specific WD40 associated putative domain (Utp21) | Utp21 specific WD40 associated putative domain | Utp21 is a subunit of U3 snoRNP, which is essential for synthesis of 18S rRNA. | Domain | |
PF04003 | Dip2/Utp12 Family (Utp12) | Dip2/Utp12 Family | - | Family |