5I1U

Crystal structure of germacradien-4-ol synthase from Streptomyces citricolor

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad5i1ua_ All alpha proteins Terpenoid synthases Terpenoid synthases automated matches automated matches (Streptomyces citricolor ) [TaxId: 212427 ], SCOPe (2.08)
Bd5i1ub_ All alpha proteins Terpenoid synthases Terpenoid synthases automated matches automated matches (Streptomyces citricolor ) [TaxId: 212427 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyAristolochene/pentalenene synthase8085691 4001461 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyTerpenoid synthases8085692 3001615 SCOP2 (2022-06-29)
BSCOP2B SuperfamilyTerpenoid synthases8085692 3001615 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF19086e5i1uA1 A: alpha bundlesX: Terpenoid synthases (From Topology)H: Terpenoid synthases (From Topology)T: Terpenoid synthasesF: PF19086ECOD (1.6)
BPF19086e5i1uB1 A: alpha bundlesX: Terpenoid synthases (From Topology)H: Terpenoid synthases (From Topology)T: Terpenoid synthasesF: PF19086ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.10.600.10 Mainly Alpha Orthogonal Bundle Farnesyl Diphosphate Synthase Farnesyl Diphosphate SynthaseCATH (4.3.0)
B1.10.600.10 Mainly Alpha Orthogonal Bundle Farnesyl Diphosphate Synthase Farnesyl Diphosphate SynthaseCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF19086Terpene synthase family 2, C-terminal metal binding (Terpene_syn_C_2)Terpene synthase family 2, C-terminal metal binding- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Germacradien-4-ol synthase - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR034686Terpene cyclase-like 2Family
A, B
IPR008949Isoprenoid synthase domain superfamilyHomologous Superfamily