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 5I0Z | pdb_00005i0z

Crystal structure of the single domain catalytic antibody 3D8-VH

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad5i0za_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Bd5i0zb_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APeptidase_S13e5i0zA1 A: alpha arraysX: Lipocalins/StreptavidinH: SAM/DNA-glycosylaseT: SAM domain-likeF: Peptidase_S13ECOD (v295.2)
BPeptidase_S13e5i0zB1 A: alpha arraysX: Lipocalins/StreptavidinH: SAM/DNA-glycosylaseT: SAM domain-likeF: Peptidase_S13ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
B2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
A, B
3D8-VH VH Mus musculus (house mouse) IGHV1-14*01, IGHJ4*01 V-DOMAIN VH IG (VH) IMGT (202643-0)

SAbDab2 Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
A, B
Heavy ChainIGHV1 --SAbDab (2026-11-06)