5GPN

Architecture of mammalian respirasome


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyLuxS/MPP-like metallohydrolase8038259 3001831 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyLuxS/MPP-like metallohydrolase8038258 3001831 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyLuxS/MPP-like metallohydrolase8038258 3001831 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyLuxS/MPP-like metallohydrolase8038259 3001831 SCOP2B (2022-06-29)
JSCOP2B SuperfamilySubunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8037844 3000779 SCOP2B (2022-06-29)
LSCOP2B SuperfamilySubunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8037844 3000779 SCOP2B (2022-06-29)
KSCOP2B SuperfamilySubunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8032884 3000787 SCOP2B (2022-06-29)
Y [auth Z]SCOP2 FamilyNqo4-like8085732 4000433 SCOP2 (2022-06-29)
Y [auth Z]SCOP2 SuperfamilyHydB/Nqo4-like8085733 3001849 SCOP2 (2022-06-29)
CA [auth d]SCOP2B SuperfamilyThioredoxin-like8085747 3000031 SCOP2B (2022-06-29)
DA [auth e]SCOP2B SuperfamilyAntiporter subunits half-channel-like8054145 3002280 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyLuxS/MPP-like metallohydrolase8038260 3001831 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyLuxS/MPP-like metallohydrolase8038263 3001831 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyLuxS/MPP-like metallohydrolase8038263 3001831 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyLuxS/MPP-like metallohydrolase8038260 3001831 SCOP2B (2022-06-29)
FA [auth g]SCOP2B SuperfamilyNADH-quinone oxidoreductase subunit 11-like8106932 3002200 SCOP2B (2022-06-29)
HA [auth i]SCOP2B SuperfamilyNADH-quinone oxidoreductase subunit 11-like8098766 3002200 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyTransmembrane di-heme cytochromes8038265 3000517 SCOP2B (2022-06-29)
CSCOP2B Superfamilya domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8038264 3000966 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyTransmembrane di-heme cytochromes8038265 3000517 SCOP2B (2022-06-29)
OSCOP2B Superfamilya domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8038264 3000966 SCOP2B (2022-06-29)
UA [auth w]SCOP2B SuperfamilyNADH-ubiquinone oxidoreductase-like8053975 3002258 SCOP2B (2022-06-29)
VA [auth x]SCOP2B SuperfamilyRubredoxin-like8091048 3001257 SCOP2B (2022-06-29)
XA [auth 1]SCOP2B SuperfamilyMitochondrial cytochrome c oxidase subunit IV8035430 3000582 SCOP2B (2022-06-29)
YA [auth 2]SCOP2B SuperfamilyCytochrome c oxidase subunit E8035431 3001402 SCOP2B (2022-06-29)
ZA [auth 3]SCOP2B SuperfamilyRubredoxin-like8035432 3001257 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyCytochrome c8038266 3000815 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyCytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) transmembrane anchor8038268 3000762 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyCytochrome c8038266 3000815 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyCytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) transmembrane anchor8038268 3000762 SCOP2B (2022-06-29)
AB [auth 4]SCOP2B SuperfamilyMitochondrial cytochrome c oxidase subunit VIa8035433 3000592 SCOP2B (2022-06-29)
BB [auth 5]SCOP2B SuperfamilyCytochrome c oxidase subunit h8035435 3000395 SCOP2B (2022-06-29)
CB [auth 6]SCOP2B SuperfamilyMitochondrial cytochrome c oxidase subunit VIc8035437 3000598 SCOP2B (2022-06-29)
DB [auth 7]SCOP2B SuperfamilyMitochondrial cytochrome c oxidase subunit VIIa8035438 3000606 SCOP2B (2022-06-29)
EB [auth 8]SCOP2B SuperfamilyMitochondrial cytochrome c oxidase subunit VIIb8035440 3000613 SCOP2B (2022-06-29)
FB [auth 9]SCOP2B SuperfamilyMitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)8035441 3000624 SCOP2B (2022-06-29)
GB [auth s]SCOP2B SuperfamilyMitochondrial cytochrome c oxidase subunit VIIIb (aka IX)8035443 3000633 SCOP2B (2022-06-29)
HB [auth y]SCOP2B SuperfamilyCytochrome c oxidase subunit I-like8035426 3000653 SCOP2B (2022-06-29)
IB [auth z]SCOP2B SuperfamilyCupredoxins8035427 3000886 SCOP2B (2022-06-29)
IB [auth z]SCOP2B SuperfamilyCytochrome c oxidase subunit II-like transmembrane region8035428 3000692 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyUbiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8038274 3000770 SCOP2B (2022-06-29)
SSCOP2B SuperfamilyUbiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8038274 3000770 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyNon-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8038275 3000806 SCOP2B (2022-06-29)
TSCOP2B SuperfamilyNon-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8038275 3000806 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF00675,PF05193e5gpnA2 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: PF00675,PF05193ECOD (1.6)
APF05193e5gpnA1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: PF05193ECOD (1.6)
MPF00675,PF05193e5gpnM1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: PF00675,PF05193ECOD (1.6)
MPF05193e5gpnM2 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: PF05193ECOD (1.6)
JPF05365e5gpnJ1 A: extended segmentsX: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: PF05365ECOD (1.6)
LPF05365e5gpnL1 A: extended segmentsX: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: PF05365ECOD (1.6)
VPF08997e5gpnV1 A: extended segmentsX: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: PF08997ECOD (1.6)
KPF08997e5gpnK1 A: extended segmentsX: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: PF08997ECOD (1.6)
WPF00329e5gpnW1 A: a+b two layersX: Nqo5-likeH: Nqo5-like (From Topology)T: Nqo5-likeF: PF00329ECOD (1.6)
X [auth Y]PF22117e5gpnY2 A: a+b two layersX: 4Fe-4S ferredoxin (From Topology)H: 4Fe-4S ferredoxin (From Topology)T: 4Fe-4S ferredoxinF: PF22117ECOD (1.6)
X [auth Y]PF13510e5gpnY3 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: PF13510ECOD (1.6)
X [auth Y]PF22151e5gpnY6 A: a+b two layersX: Formate dehydrogenase/DMSO reductase, domain 1 (From Topology)H: Formate dehydrogenase/DMSO reductase, domain 1 (From Topology)T: Formate dehydrogenase/DMSO reductase, domain 1F: PF22151ECOD (1.6)
X [auth Y]PF00384e5gpnY5 A: a/b three-layered sandwichesX: Rossmann-likeH: Formate dehydrogenase/DMSO reductase, domains 2 and 3 (From Topology)T: Formate dehydrogenase/DMSO reductase, domains 2 and 3F: PF00384ECOD (1.6)
X [auth Y]PF00384,PF09326e5gpnY4 A: a/b three-layered sandwichesX: Rossmann-likeH: Formate dehydrogenase/DMSO reductase, domains 2 and 3 (From Topology)T: Formate dehydrogenase/DMSO reductase, domains 2 and 3F: PF00384,PF09326ECOD (1.6)
X [auth Y]PF10588e5gpnY1 A: extended segmentsX: iron-sulfur center-binding helical hairpin (From Topology)H: iron-sulfur center-binding helical hairpin (From Topology)T: iron-sulfur center-binding helical hairpinF: PF10588ECOD (1.6)
Y [auth Z]PF00346e5gpnZ1 A: alpha complex topologyX: alpha-helical domain in nickel-iron hydrogenase, large subunit (From Topology)H: alpha-helical domain in nickel-iron hydrogenase, large subunit (From Topology)T: alpha-helical domain in nickel-iron hydrogenase, large subunitF: PF00346ECOD (1.6)
Y [auth Z]PF00346e5gpnZ3 A: a+b two layersX: FAD-linked reductases, C-terminal domain-likeH: Ni-Fe binding domain in nickel-iron hydrogenase large subunit (From Topology)T: Ni-Fe binding domain in nickel-iron hydrogenase large subunitF: PF00346ECOD (1.6)
Z [auth a]PF01058e5gpna1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Class I glutamine amidotransferase-likeT: CheY-likeF: PF01058ECOD (1.6)
AA [auth b]PF00037e5gpnb1 A: a+b two layersX: 4Fe-4S ferredoxin (From Topology)H: 4Fe-4S ferredoxin (From Topology)T: 4Fe-4S ferredoxinF: PF00037ECOD (1.6)
BA [auth c]PF10589e5gpnc3 A: alpha bundlesX: Bromodomain-likeH: Nqo1C-terminal domain-like (From Topology)T: Nqo1C-terminal domain-likeF: PF10589ECOD (1.6)
BA [auth c]PF22461e5gpnc2 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Nqo1 middle domain-likeF: PF22461ECOD (1.6)
BA [auth c]PF01512e5gpnc1 A: a/b three-layered sandwichesX: Nqo1 FMN-binding domain-like (From Topology)H: Nqo1 FMN-binding domain-like (From Topology)T: Nqo1 FMN-binding domain-likeF: PF01512ECOD (1.6)
CA [auth d]PF01257e5gpnd2 A: alpha bundlesX: NQO2 helical bundle domain (From Topology)H: NQO2 helical bundle domain (From Topology)T: NQO2 helical bundle domainF: PF01257ECOD (1.6)
CA [auth d]PF01257e5gpnd1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: PF01257ECOD (1.6)
DA [auth e]PF00146e5gpne1 A: alpha complex topologyX: Sodium/proton antiporter subunits-like (From Homology)H: Sodium/proton antiporter subunits-likeT: NADH-quinone oxidoreductase subunit 8 (Nqo8)-relatedF: PF00146ECOD (1.6)
BPF00675e5gpnB1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: PF00675ECOD (1.6)
BPF05193e5gpnB2 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: PF05193ECOD (1.6)
NPF00675e5gpnN1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: PF00675ECOD (1.6)
NPF05193e5gpnN2 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: PF05193ECOD (1.6)
EA [auth f]PF00361,PF06444e5gpnf1 A: alpha complex topologyX: Sodium/proton antiporter subunits-like (From Homology)H: Sodium/proton antiporter subunits-likeT: NADH-quinone oxidoreductase subunit L (NuoL)-relatedF: PF00361,PF06444ECOD (1.6)
FA [auth g]PF00507e5gpng1 A: extended segmentsX: NADH-quinone oxidoreductase subunit A (From Topology)H: NADH-quinone oxidoreductase subunit A (From Topology)T: NADH-quinone oxidoreductase subunit AF: PF00507ECOD (1.6)
GA [auth h]PF00361,PF01059e5gpnh1 A: alpha complex topologyX: Sodium/proton antiporter subunits-like (From Homology)H: Sodium/proton antiporter subunits-likeT: NADH-quinone oxidoreductase subunit L (NuoL)-relatedF: PF00361,PF01059ECOD (1.6)
HA [auth i]PF00420e5gpni1 A: alpha complex topologyX: NADH-quinone oxidoreductase subunit K (From Topology)H: NADH-quinone oxidoreductase subunit K (From Topology)T: NADH-quinone oxidoreductase subunit KF: PF00420ECOD (1.6)
IA [auth j]PF00361,PF00662,PF06455e5gpnj1 A: alpha complex topologyX: Sodium/proton antiporter subunits-like (From Homology)H: Sodium/proton antiporter subunits-likeT: NADH-quinone oxidoreductase subunit L (NuoL)-relatedF: PF00361,PF00662,PF06455ECOD (1.6)
JA [auth k]PF00499e5gpnk1 A: extended segmentsX: NADH-quinone oxidoreductase subunit J (From Topology)H: NADH-quinone oxidoreductase subunit J (From Topology)T: NADH-quinone oxidoreductase subunit JF: PF00499ECOD (1.6)
LA [auth m]PF14987e5gpnm1 A: extended segmentsX: Mitochondrial complex I, B9 subunit (From Topology)H: Mitochondrial complex I, B9 subunit (From Topology)T: Mitochondrial complex I, B9 subunitF: PF14987ECOD (1.6)
MA [auth n]PF05047e5gpnn1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: PF05047ECOD (1.6)
NA [auth o]PF10200e5gpno1 A: alpha bundlesX: cytochrome bc1 complex 11 kDa protein-likeH: CHCH domain (From Topology)T: CHCH domainF: PF10200ECOD (1.6)
OA [auth p]PF01370e5gpnp1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: NAD(P)-binding Rossmann-fold domainsF: PF01370ECOD (1.6)
CPF00032e5gpnC1 A: alpha bundlesX: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: PF00032ECOD (1.6)
CPF00033e5gpnC2 A: alpha bundlesX: Transmembrane heme-binding four-helical bundle (From Homology)H: Transmembrane heme-binding four-helical bundleT: Transmembrane di-heme cytochromesF: PF00033ECOD (1.6)
OPF00032e5gpnO1 A: alpha bundlesX: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: PF00032ECOD (1.6)
OPF00033e5gpnO2 A: alpha bundlesX: Transmembrane heme-binding four-helical bundle (From Homology)H: Transmembrane heme-binding four-helical bundleT: Transmembrane di-heme cytochromesF: PF00033ECOD (1.6)
PA [auth q]PF01712e5gpnq1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF01712ECOD (1.6)
QA [auth r]PF06212e5gpnr1 A: extended segmentsX: Preprotein translocase subunit YajC (From Topology)H: Preprotein translocase subunit YajC (From Topology)T: Preprotein translocase subunit YajCF: PF06212ECOD (1.6)
JB [auth Aa]PF00550e5gpnAa1 A: alpha bundlesX: ACP-likeH: Acyl-carrier protein (ACP) (From Topology)T: Acyl-carrier protein (ACP)F: PF00550ECOD (1.6)
RA [auth t]PF00550e5gpnt1 A: alpha bundlesX: ACP-likeH: Acyl-carrier protein (ACP) (From Topology)T: Acyl-carrier protein (ACP)F: PF00550ECOD (1.6)
UA [auth w]PF04800e5gpnw1 A: a+b two layersX: Putative oxidoreductase (From Topology)H: Putative oxidoreductase (From Topology)T: Putative oxidoreductaseF: PF04800ECOD (1.6)
VA [auth x]PF10276e5gpnx1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Cytochrome c oxidase Subunit FF: PF10276ECOD (1.6)
WA [auth 0]PF00510e5gpn01 A: alpha bundlesX: Cytochrome c oxidase subunit III-like (From Topology)H: Cytochrome c oxidase subunit III-like (From Topology)T: Cytochrome c oxidase subunit III-likeF: PF00510ECOD (1.6)
XA [auth 1]PF02936e5gpn11 A: extended segmentsX: Mitochondrial cytochrome c oxidase subunit IV (From Topology)H: Mitochondrial cytochrome c oxidase subunit IV (From Topology)T: Mitochondrial cytochrome c oxidase subunit IVF: PF02936ECOD (1.6)
YA [auth 2]PF02284e5gpn21 A: alpha superhelicesX: Repetitive alpha hairpinsH: Cytochrome c oxidase subunit E (From Topology)T: Cytochrome c oxidase subunit EF: PF02284ECOD (1.6)
ZA [auth 3]PF01215e5gpn31 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Cytochrome c oxidase Subunit FF: PF01215ECOD (1.6)
DPF02167e5gpnD2 A: alpha arraysX: Cytochrome c-likeH: Cytochrome c (From Topology)T: Cytochrome cF: PF02167ECOD (1.6)
DF_UNCLASSIFIEDe5gpnD1 A: extended segmentsX: cytochrome c1 transmembrane anchor (From Topology)H: cytochrome c1 transmembrane anchor (From Topology)T: cytochrome c1 transmembrane anchorF: F_UNCLASSIFIEDECOD (1.6)
PPF02167e5gpnP1 A: alpha arraysX: Cytochrome c-likeH: Cytochrome c (From Topology)T: Cytochrome cF: PF02167ECOD (1.6)
PF_UNCLASSIFIEDe5gpnP2 A: extended segmentsX: cytochrome c1 transmembrane anchor (From Topology)H: cytochrome c1 transmembrane anchor (From Topology)T: cytochrome c1 transmembrane anchorF: F_UNCLASSIFIEDECOD (1.6)
AB [auth 4]PF02046e5gpn41 A: extended segmentsX: Mitochondrial cytochrome c oxidase subunit VIa (From Topology)H: Mitochondrial cytochrome c oxidase subunit VIa (From Topology)T: Mitochondrial cytochrome c oxidase subunit VIaF: PF02046ECOD (1.6)
BB [auth 5]PF02297e5gpn51 A: few secondary structure elementsX: Cytochrome c oxidase subunit h (From Topology)H: Cytochrome c oxidase subunit h (From Topology)T: Cytochrome c oxidase subunit hF: PF02297ECOD (1.6)
CB [auth 6]PF02937e5gpn61 A: extended segmentsX: Mitochondrial cytochrome c oxidase subunit VIc (From Topology)H: Mitochondrial cytochrome c oxidase subunit VIc (From Topology)T: Mitochondrial cytochrome c oxidase subunit VIcF: PF02937ECOD (1.6)
DB [auth 7]PF02238e5gpn71 A: extended segmentsX: Mitochondrial cytochrome c oxidase subunit VIIa (From Topology)H: Mitochondrial cytochrome c oxidase subunit VIIa (From Topology)T: Mitochondrial cytochrome c oxidase subunit VIIaF: PF02238ECOD (1.6)
EB [auth 8]PF05392e5gpn81 A: extended segmentsX: Mitochondrial cytochrome c oxidase subunit VIIb (From Topology)H: Mitochondrial cytochrome c oxidase subunit VIIb (From Topology)T: Mitochondrial cytochrome c oxidase subunit VIIbF: PF05392ECOD (1.6)
FB [auth 9]PF02935e5gpn91 A: extended segmentsX: Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) (From Topology)H: Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) (From Topology)T: Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)F: PF02935ECOD (1.6)
GB [auth s]PF02285e5gpns1 A: extended segmentsX: Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) (From Topology)H: Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) (From Topology)T: Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)F: PF02285ECOD (1.6)
HB [auth y]PF00115e5gpny1 A: alpha superhelicesX: Cytochrome c oxidase subunit I-likeH: Cytochrome c oxidase subunit I-like (From Topology)T: Cytochrome c oxidase subunit I-likeF: PF00115ECOD (1.6)
IB [auth z]PF00116e5gpnz1 A: beta sandwichesX: Cupredoxin-likeH: Cupredoxin-related (From Topology)T: Cupredoxin-relatedF: PF00116ECOD (1.6)
IB [auth z]PF02790e5gpnz2 A: extended segmentsX: Cytochrome c oxidase subunit II-like, transmembrane region (From Topology)H: Cytochrome c oxidase subunit II-like, transmembrane region (From Topology)T: Cytochrome c oxidase subunit II-like, transmembrane regionF: PF02790ECOD (1.6)
EPF00355e5gpnE2 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: PF00355ECOD (1.6)
EPF02921e5gpnE1 A: extended segmentsX: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)H: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)T: iron-sulfur subunit (ISP) transmembrane anchorF: PF02921ECOD (1.6)
QPF00355e5gpnQ2 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: PF00355ECOD (1.6)
QPF02921e5gpnQ1 A: extended segmentsX: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)H: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)T: iron-sulfur subunit (ISP) transmembrane anchorF: PF02921ECOD (1.6)
LB [auth Ac]PF15879e5gpnAc1 A: extended segmentsX: Mitochondrial complex I, MWFE subunit (From Topology)H: Mitochondrial complex I, MWFE subunit (From Topology)T: Mitochondrial complex I, MWFE subunitF: PF15879ECOD (1.6)
NB [auth Ae]PF04716e5gpnAe1 A: extended segmentsX: FATC domain (From Topology)H: FATC domain (From Topology)T: FATC domainF: PF04716ECOD (1.6)
OB [auth Af]PF05347e5gpnAf1 A: alpha bundlesX: LYR protein (From Topology)H: LYR protein (From Topology)T: LYR proteinF: PF05347ECOD (1.6)
SB [auth Aj]PF10249e5gpnAj1 A: alpha bundlesX: Mitochondrial complex I, PDSW subunit (From Topology)H: Mitochondrial complex I, PDSW subunit (From Topology)T: Mitochondrial complex I, PDSW subunitF: PF10249ECOD (1.6)
TB [auth Ak]PF05347e5gpnAk1 A: alpha bundlesX: LYR protein (From Topology)H: LYR protein (From Topology)T: LYR proteinF: PF05347ECOD (1.6)
UB [auth Al]PF06374e5gpnAl1 A: extended segmentsX: Mitochondrial complex I, B14.5b subunit (From Topology)H: Mitochondrial complex I, B14.5b subunit (From Topology)T: Mitochondrial complex I, B14.5b subunitF: PF06374ECOD (1.6)
VB [auth Am]PF15088e5gpnAm1 A: extended segmentsX: Mitochondrial complex I, KFYI subunit (From Topology)H: Mitochondrial complex I, KFYI subunit (From Topology)T: Mitochondrial complex I, KFYI subunitF: PF15088ECOD (1.6)
RPF02271e5gpnR1 A: alpha arraysX: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: PF02271ECOD (1.6)
FPF02271e5gpnF1 A: alpha arraysX: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: PF02271ECOD (1.6)
GPF02939e5gpnG1 A: extended segmentsX: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: PF02939ECOD (1.6)
SPF02939e5gpnS1 A: extended segmentsX: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: PF02939ECOD (1.6)
HPF02320e5gpnH1 A: alpha bundlesX: cytochrome bc1 complex 11 kDa protein-likeH: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: PF02320ECOD (1.6)
TPF02320e5gpnT1 A: alpha bundlesX: cytochrome bc1 complex 11 kDa protein-likeH: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: PF02320ECOD (1.6)
UPF09165e5gpnU1 A: extended segmentsX: Ubiquinol-cytochrome c reductase 8 kDa protein (From Topology)H: Ubiquinol-cytochrome c reductase 8 kDa protein (From Topology)T: Ubiquinol-cytochrome c reductase 8 kDa proteinF: PF09165ECOD (1.6)
IPF09165e5gpnI1 A: extended segmentsX: Ubiquinol-cytochrome c reductase 8 kDa protein (From Topology)H: Ubiquinol-cytochrome c reductase 8 kDa protein (From Topology)T: Ubiquinol-cytochrome c reductase 8 kDa proteinF: PF09165ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, M
PF05193Peptidase M16 inactive domain (Peptidase_M16_C)Peptidase M16 inactive domainPeptidase M16 consists of two structurally related domains. One is the active peptidase, whereas the other is inactive. The two domains hold the substrate like a clamp [1].Domain
A, M
PF00675Insulinase (Peptidase family M16) (Peptidase_M16)Insulinase (Peptidase family M16)- Family
J, L
PF05365Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like (UCR_UQCRX_QCR9)Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like- Family
K, V
PF08997Ubiquinol-cytochrome C reductase complex, 6.4kD protein (UCR_6-4kD)Ubiquinol-cytochrome C reductase complex, 6.4kD proteinThe ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is an essential component of the mitochondrial cellular respiratory chain. This family represents the 6.4kD protein, which may be closely linked to the iron-sulphur protein in the ...The ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is an essential component of the mitochondrial cellular respiratory chain. This family represents the 6.4kD protein, which may be closely linked to the iron-sulphur protein in the complex and function as an iron-sulphur protein binding factor [1].
Domain
X [auth Y]PF00384Molybdopterin oxidoreductase (Molybdopterin)Molybdopterin oxidoreductase- Family
X [auth Y]PF09326NADH-ubiquinone oxidoreductase subunit G, C-terminal (NADH_dhqG_C)NADH-ubiquinone oxidoreductase subunit G, C-terminal- Family
X [auth Y]PF135102Fe-2S iron-sulfur cluster binding domain (Fer2_4)2Fe-2S iron-sulfur cluster binding domainThe 2Fe-2S ferredoxin family have a general core structure consisting of beta(2)-alpha-beta(2) which a beta-grasp type fold. The domain is around one hundred amino acids with four conserved cysteine residues to which the 2Fe-2S cluster is ligated. Th ...The 2Fe-2S ferredoxin family have a general core structure consisting of beta(2)-alpha-beta(2) which a beta-grasp type fold. The domain is around one hundred amino acids with four conserved cysteine residues to which the 2Fe-2S cluster is ligated. This cluster appears within sarcosine oxidase proteins.
Domain
X [auth Y]PF10588NADH-ubiquinone oxidoreductase-G iron-sulfur binding region (NADH-G_4Fe-4S_3)NADH-ubiquinone oxidoreductase-G iron-sulfur binding region- Domain
Y [auth Z]PF00346Respiratory-chain NADH dehydrogenase, 49 Kd subunit (Complex1_49kDa)Respiratory-chain NADH dehydrogenase, 49 Kd subunit- Family
Z [auth a]PF01058NADH ubiquinone oxidoreductase, 20 Kd subunit (Oxidored_q6)NADH ubiquinone oxidoreductase, 20 Kd subunit- Family
BA [auth c]PF01512Respiratory-chain NADH dehydrogenase 51 Kd subunit (Complex1_51K)Respiratory-chain NADH dehydrogenase 51 Kd subunit- Family
BA [auth c]PF10589NADH-ubiquinone oxidoreductase-F iron-sulfur binding region (NADH_4Fe-4S)NADH-ubiquinone oxidoreductase-F iron-sulfur binding region- Domain
CA [auth d]PF01257Thioredoxin-like [2Fe-2S] ferredoxin (2Fe-2S_thioredx)Thioredoxin-like [2Fe-2S] ferredoxin- Family
DA [auth e]PF00146NADH dehydrogenase (NADHdh)NADH dehydrogenase- Family
B, N
PF05193Peptidase M16 inactive domain (Peptidase_M16_C)Peptidase M16 inactive domainPeptidase M16 consists of two structurally related domains. One is the active peptidase, whereas the other is inactive. The two domains hold the substrate like a clamp [1].Domain
B, N
PF00675Insulinase (Peptidase family M16) (Peptidase_M16)Insulinase (Peptidase family M16)- Family
EA [auth f]PF00361Proton-conducting membrane transporter (Proton_antipo_M)Proton-conducting membrane transporter- Family
EA [auth f]PF06444NADH dehydrogenase subunit 2 C-terminus (NADH_dehy_S2_C)NADH dehydrogenase subunit 2 C-terminus- Family
FA [auth g]PF00507NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 (Oxidored_q4)NADH-ubiquinone/plastoquinone oxidoreductase, chain 3- Family
GA [auth h]PF00361Proton-conducting membrane transporter (Proton_antipo_M)Proton-conducting membrane transporter- Family
GA [auth h]PF01059NADH-ubiquinone oxidoreductase chain 4, amino terminus (Oxidored_q5_N)NADH-ubiquinone oxidoreductase chain 4, amino terminus- Family
HA [auth i]PF00420NADH-ubiquinone/plastoquinone oxidoreductase chain 4L (Oxidored_q2)NADH-ubiquinone/plastoquinone oxidoreductase chain 4L- Family
IA [auth j]PF00361Proton-conducting membrane transporter (Proton_antipo_M)Proton-conducting membrane transporter- Family
IA [auth j]PF06455NADH dehydrogenase subunit 5 C-terminus (NADH5_C)NADH dehydrogenase subunit 5 C-terminus- Family
IA [auth j]PF00662NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus (Proton_antipo_N)NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus- Family
JA [auth k],
KA [auth l]
PF00499NADH-ubiquinone/plastoquinone oxidoreductase chain 6 (Oxidored_q3)NADH-ubiquinone/plastoquinone oxidoreductase chain 6- Family
LA [auth m]PF14987NADH dehydrogenase 1 alpha subcomplex subunit 3 (NADHdh_A3)NADH dehydrogenase 1 alpha subcomplex subunit 3- Family
NA [auth o]PF10200NADH:ubiquinone oxidoreductase, NDUFS5-15kDa (Ndufs5)NADH:ubiquinone oxidoreductase, NDUFS5-15kDa- Family
OA [auth p]PF01370NAD dependent epimerase/dehydratase family (Epimerase)NAD dependent epimerase/dehydratase family- Family
C, O
PF00032Cytochrome b(C-terminal)/b6/petD (Cytochrom_B_C)Cytochrome b(C-terminal)/b6/petD- Domain
C, O
PF00033Cytochrome b/b6/petB (Cytochrome_B)Cytochrome b/b6/petB- Domain
PA [auth q],
TA [auth v]
PF01712Deoxynucleoside kinase (dNK)Deoxynucleoside kinaseThis family consists of various deoxynucleoside kinases cytidine EC:2.7.1.74, guanosine EC:2.7.1.113, adenosine EC:2.7.1.76 and thymidine kinase EC:2.7.1.21 (which also phosphorylates deoxyuridine and deoxycytosine.) These enzymes catalyse the prod ...This family consists of various deoxynucleoside kinases cytidine EC:2.7.1.74, guanosine EC:2.7.1.113, adenosine EC:2.7.1.76 and thymidine kinase EC:2.7.1.21 (which also phosphorylates deoxyuridine and deoxycytosine.) These enzymes catalyse the production of deoxynucleotide 5'-monophosphate from a deoxynucleoside. Using ATP and yielding ADP in the process.
Domain
QA [auth r]PF06212GRIM-19 protein (GRIM-19)GRIM-19 protein- Family
JB [auth Aa],
RA [auth t]
PF00550Phosphopantetheine attachment site (PP-binding)Phosphopantetheine attachment siteA 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes memb ...A 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes members not included in Prosite. The inclusion of these members is supported by sequence analysis and functional evidence. The related domain of Swiss:P19828 has the attachment serine replaced by an alanine.
Domain
RB [auth Ai],
SA [auth u]
PF09781NADH:ubiquinone oxidoreductase, NDUFB5/SGDH subunit (NDUF_B5)NADH:ubiquinone oxidoreductase, NDUFB5/SGDH subunit- Family
UA [auth w]PF04800NADH dehydrogenase ubiquinone Fe-S protein 4 (NDUS4)NADH dehydrogenase ubiquinone Fe-S protein 4- Family
VA [auth x]PF10276Zinc-finger domain (zf-CHCC)Zinc-finger domainThis is a short zinc-finger domain conserved from fungi to humans. It is Cx8Hx14Cx2C.Domain
XA [auth 1]PF02936Cytochrome c oxidase subunit IV (COX4)Cytochrome c oxidase subunit IV- Family
YA [auth 2]PF02284Cytochrome c oxidase subunit Va (COX5A)Cytochrome c oxidase subunit VaCytochrome c oxidase, a 13 sub-unit complex, EC:1.9.3.1 is the terminal oxidase in the mitochondrial electron transport chain. This family is composed of cytochrome c oxidase subunit Va.Domain
ZA [auth 3]PF01215Cytochrome c oxidase subunit Vb (COX5B)Cytochrome c oxidase subunit Vb- Domain
D, P
PF02167Cytochrome C1 family (Cytochrom_C1)Cytochrome C1 family- Family
AB [auth 4]PF02046Cytochrome c oxidase subunit VIa (COX6A)Cytochrome c oxidase subunit VIa- Family
BB [auth 5]PF02297Cytochrome oxidase c subunit VIb (COX6B)Cytochrome oxidase c subunit VIbCytochrome c oxidase, a 13 sub-unit complex, EC:1.9.3.1 is the terminal oxidase in the mitochondrial electron transport chain. This family is composed of the potentially heme-binding subunit IVb of the oxidase.Domain
CB [auth 6]PF02937Cytochrome c oxidase subunit VIc (COX6C)Cytochrome c oxidase subunit VIc- Family
DB [auth 7]PF02238Cytochrome c oxidase subunit VII (COX7a)Cytochrome c oxidase subunit VII- Family
EB [auth 8]PF05392Cytochrome C oxidase chain VIIB (COX7B)Cytochrome C oxidase chain VIIB- Family
FB [auth 9]PF02935Cytochrome c oxidase subunit VIIc (COX7C)Cytochrome c oxidase subunit VIIc- Family
GB [auth s]PF02285Cytochrome oxidase c subunit VIII (COX8)Cytochrome oxidase c subunit VIII- Family
HB [auth y]PF00115Cytochrome C and Quinol oxidase polypeptide I (COX1)Cytochrome C and Quinol oxidase polypeptide I- Family
IB [auth z]PF00116Cytochrome C oxidase subunit II, periplasmic domain (COX2)Cytochrome C oxidase subunit II, periplasmic domain- Domain
IB [auth z]PF02790Cytochrome C oxidase subunit II, transmembrane domain (COX2_TM)Cytochrome C oxidase subunit II, transmembrane domain- Family
LB [auth Ac]PF15879NADH-ubiquinone oxidoreductase MWFE subunit (MWFE)NADH-ubiquinone oxidoreductase MWFE subunit- Family
PB [auth Ag]PF02466Tim17/Tim22/Tim23/Pmp24 family (Tim17)Tim17/Tim22/Tim23/Pmp24 family- Family
TB [auth Ak]PF05347Complex 1 protein (LYR family) (Complex1_LYR)Complex 1 protein (LYR family)- Family
VB [auth Am]PF14962Mitochondria Localisation Sequence (AIF-MLS)Mitochondria Localisation Sequence- Family
WB [auth An]PF06747CHCH domain (CHCH)CHCH domainwe have identified a conserved motif in the LOC118487 protein that we have called the CHCH motif. Alignment of this protein with related members showed the presence of three subgroups of proteins, which are called the S (Small), N (N-terminal extende ...we have identified a conserved motif in the LOC118487 protein that we have called the CHCH motif. Alignment of this protein with related members showed the presence of three subgroups of proteins, which are called the S (Small), N (N-terminal extended) and C (C-terminal extended) subgroups. All three sub-groups of proteins have in common that they contain a predicted conserved [coiled coil 1]-[helix 1]-[coiled coil 2]-[helix 2] domain (CHCH domain). Within each helix of the CHCH domain, there are two cysteines present in a C-X9-C motif. The N-group contains an additional double helix domain, and each helix contains the C-X9-C motif. This family contains a number of characterised proteins: Cox19 protein - a nuclear gene of Saccharomyces cerevisiae, codes for an 11-kDa protein (Cox19p) required for expression of cytochrome oxidase. Because cox19 mutants are able to synthesise the mitochondrial and nuclear gene products of cytochrome oxidase, Cox19p probably functions post-translationally during assembly of the enzyme. Cox19p is present in the cytoplasm and mitochondria, where it exists as a soluble intermembrane protein. This dual location is similar to what was previously reported for Cox17p, a low molecular weight copper protein thought to be required for maturation of the CuA centre of subunit 2 of cytochrome oxidase. Cox19p have four conserved potential metal ligands, these are three cysteines and one histidine. Mrp10 - belongs to the class of yeast mitochondrial ribosomal proteins that are essential for translation [2]. Eukaryotic NADH-ubiquinone oxidoreductase 19 kDa (NDUFA8) subunit [3]. The CHCH domain was previously called DUF657 [4].
Domain
G, S
PF02939UcrQ family (UcrQ)UcrQ family- Family
H, T
PF02320Ubiquinol-cytochrome C reductase hinge protein (UCR_hinge)Ubiquinol-cytochrome C reductase hinge protein- Family
I, U
PF09165Ubiquinol-cytochrome c reductase 8 kDa, N-terminal (Ubiq-Cytc-red_N)Ubiquinol-cytochrome c reductase 8 kDa, N-terminalMembers of this family adopt a structure consisting of many antiparallel beta sheets, with few alpha helices, in a non-globular arrangement. They are required for proper functioning of the respiratory chain [1].Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, M
Cytochrome b-c1 complex subunit 1, mitochondrial -
J, L
Cytochrome b-c1 complex subunit 9-
K, V
Cytochrome b-c1 complex subunit 10-
NADH dehydrogenase [ubiquinone] iron-sulfur protein 3---
X [auth Y]NADH-ubiquinone oxidoreductase 75 kDa subunit
Y [auth Z]NADH dehydrogenase [ubiquinone] iron-sulfur protein 2
Z [auth a]NADH dehydrogenase [ubiquinone] iron-sulfur protein 7 - -
AA [auth b]NADH dehydrogenase [ubiquinone] iron-sulfur protein 8---
BA [auth c]NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial
CA [auth d]NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial - -
DA [auth e]NADH-ubiquinone oxidoreductase chain 1
B, N
Cytochrome b-c1 complex subunit 2, mitochondrial
EA [auth f]NADH-ubiquinone oxidoreductase chain 2
FA [auth g]NADH-ubiquinone oxidoreductase chain 3
GA [auth h]NADH-ubiquinone oxidoreductase chain 4
HA [auth i]NADH-ubiquinone oxidoreductase chain 4L
IA [auth j]NADH-ubiquinone oxidoreductase chain 5
JA [auth k],
KA [auth l]
NADH-ubiquinone oxidoreductase chain 6
LA [auth m]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3- -
MA [auth n]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2---
NA [auth o]NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-
OA [auth p]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9
C, O
Cytochrome b
PA [auth q],
TA [auth v]
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial-
QA [auth r]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13- -
JB [auth Aa],
RA [auth t]
Acyl carrier protein---
RB [auth Ai],
SA [auth u]
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5-
UA [auth w]Mitochondrial NADH dehydrogenase Fe-S protein 4-
VA [auth x]NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial-
WA [auth 0]Cytochrome c oxidase subunit 3---
XA [auth 1]Cytochrome c oxidase subunit 4 isoform 1, mitochondrial
YA [auth 2]Cytochrome c oxidase subunit 5A, mitochondrial
ZA [auth 3]Cytochrome c oxidase subunit 5B, mitochondrial
D, P
Cytochrome c1, heme protein, mitochondrial
AB [auth 4]Cytochrome c oxidase subunit 6A2, mitochondrial
BB [auth 5]Cytochrome c oxidase subunit 6B1-
CB [auth 6]Cytochrome c oxidase subunit 6C-
DB [auth 7]Cytochrome c oxidase subunit 7A1, mitochondrial
EB [auth 8]Cytochrome c oxidase subunit 7B, mitochondrial-
FB [auth 9]Cytochrome c oxidase subunit 7C, mitochondrial-
GB [auth s]Cytochrome c oxidase subunit 8B, mitochondrial-
HB [auth y]Cytochrome c oxidase subunit 1
IB [auth z]Cytochrome c oxidase subunit 2
KB [auth Ab],
QB [auth Ah]
NADH dehydrogenase [ubiquinone] 1 unknown subunit fragment---
E, Q
Cytochrome b-c1 complex subunit Rieske, mitochondrial---
LB [auth Ac]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1-
EC [auth Av],
MB [auth Ad],
XB [auth Ao],
YB [auth Ap]
NADH dehydrogenase [ubiquinone] 1 unknown subunit fragment---
NB [auth Ae]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5---
OB [auth Af]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6---
PB [auth Ag]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11-
SB [auth Aj]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-
TB [auth Ak]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9-
UB [auth Al]NADH dehydrogenase [ubiquinone] 1 subunit C2---
VB [auth Am]NADH dehydrogenase [ubiquinone] 1 subunit C1-
WB [auth An]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-
F, R
Cytochrome b-c1 complex subunit 7---
BC [auth As],
FC [auth Aw],
ZB [auth Aq]
NADH dehydrogenase [ubiquinone] 1 unknown subunit fragment---
AC [auth Ar]NADH dehydrogenase [ubiquinone] 1 unknown subunit fragment---
CC [auth At]NADH dehydrogenase [ubiquinone] 1 unknown subunit fragment---
DC [auth Au]NADH dehydrogenase [ubiquinone] 1 unknown subunit fragment---
G, S
Cytochrome b-c1 complex subunit 8-
H, T
Cytochrome b-c1 complex subunit 6, mitochondrial-
I, U
Cytochrome b-c1 complex subunit Rieske, mitochondrial

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, M
IPR007863Peptidase M16, C-terminalDomain
A, M
IPR011765Peptidase M16, N-terminalDomain
A, M
IPR011249Metalloenzyme, LuxS/M16 peptidase-likeHomologous Superfamily
J, L
IPR008027Cytochrome b-c1 complex subunit 9Family
J, L
IPR036656Cytochrome b-c1 complex subunit 9 superfamilyHomologous Superfamily
K, V
IPR029027Single alpha-helix domain superfamilyHomologous Superfamily
K, V
IPR015089Cytochrome b-c1 complex subunit 10Family
X [auth Y]IPR006963Molybdopterin oxidoreductase, 4Fe-4S domainDomain
X [auth Y]IPR015405NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial-likeDomain
X [auth Y]IPR006656Molybdopterin oxidoreductaseDomain
X [auth Y]IPR0360102Fe-2S ferredoxin-like superfamilyHomologous Superfamily
X [auth Y]IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainDomain
X [auth Y]IPR000283NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved siteConserved Site
X [auth Y]IPR010228NADH:ubiquinone oxidoreductase, subunit GFamily
X [auth Y]IPR019574NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur bindingDomain
Y [auth Z]IPR014029NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved siteConserved Site
Y [auth Z]IPR029014[NiFe]-hydrogenase, large subunitHomologous Superfamily
Y [auth Z]IPR022885NAD(P)H-quinone oxidoreductase subunit D/HFamily
Y [auth Z]IPR001135NADH-quinone oxidoreductase, subunit DDomain
Z [auth a]IPR006138NADH-ubiquinone oxidoreductase, 20 Kd subunitFamily
Z [auth a]IPR006137NADH:ubiquinone oxidoreductase-like, 20kDa subunitDomain
BA [auth c]IPR019575NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domainDomain
BA [auth c]IPR011537NADH ubiquinone oxidoreductase, F subunitFamily
BA [auth c]IPR001949NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved siteConserved Site
BA [auth c]IPR037225NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamilyHomologous Superfamily
BA [auth c]IPR037207NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamilyHomologous Superfamily
BA [auth c]IPR011538NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domainDomain
CA [auth d]IPR042128NuoE domainDomain
CA [auth d]IPR002023NADH-quinone oxidoreductase subunit E-likeFamily
CA [auth d]IPR041921NADH-quinone oxidoreductase subunit E, N-terminalHomologous Superfamily
CA [auth d]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
DA [auth e]IPR001694NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit HFamily
DA [auth e]IPR018086NADH:ubiquinone oxidoreductase, subunit 1, conserved siteConserved Site
B, N
IPR007863Peptidase M16, C-terminalDomain
B, N
IPR011765Peptidase M16, N-terminalDomain
B, N
IPR011249Metalloenzyme, LuxS/M16 peptidase-likeHomologous Superfamily
B, N
IPR001431Peptidase M16, zinc-binding siteBinding Site
EA [auth f]IPR010933NADH dehydrogenase subunit 2, C-terminalDomain
EA [auth f]IPR003917NADH:ubiquinone oxidoreductase, chain 2Family
EA [auth f]IPR001750NADH:quinone oxidoreductase/Mrp antiporter, membrane subunitDomain
FA [auth g]IPR000440NADH:ubiquinone/plastoquinone oxidoreductase, chain 3Family
FA [auth g]IPR038430NADH:ubiquinone oxidoreductase, subunit 3 superfamilyHomologous Superfamily
GA [auth h]IPR003918NADH:ubiquinone oxidoreductaseFamily
GA [auth h]IPR010227NADH-quinone oxidoreductase, chain M/4Family
GA [auth h]IPR000260NADH:ubiquinone oxidoreductase chain 4, N-terminalDomain
GA [auth h]IPR001750NADH:quinone oxidoreductase/Mrp antiporter, membrane subunitDomain
HA [auth i]IPR001133NADH-ubiquinone oxidoreductase chain 4L/KFamily
HA [auth i]IPR039428NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-likeFamily
IA [auth j]IPR003945NADH-quinone oxidoreductase, chain 5-likeFamily
IA [auth j]IPR010934NADH dehydrogenase subunit 5, C-terminalDomain
IA [auth j]IPR001516NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminalDomain
IA [auth j]IPR001750NADH:quinone oxidoreductase/Mrp antiporter, membrane subunitDomain
IA [auth j]IPR018393NADH-plastoquinone oxidoreductase, chain 5 subgroupFamily
JA [auth k],
KA [auth l]
IPR042106NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJHomologous Superfamily
JA [auth k],
KA [auth l]
IPR001457NADH:ubiquinone/plastoquinone oxidoreductase, chain 6Family
LA [auth m]IPR026626NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3Family
NA [auth o]IPR019342NADH:ubiquinone oxidoreductase, iron-sulphur subunit 5Family
OA [auth p]IPR036291NAD(P)-binding domain superfamilyHomologous Superfamily
OA [auth p]IPR001509NAD-dependent epimerase/dehydrataseDomain
C, O
IPR036150Cytochrome b/b6, C-terminal domain superfamilyHomologous Superfamily
C, O
IPR027387Cytochrome b/b6-like domain superfamilyHomologous Superfamily
C, O
IPR048260Cytochrome b/b6, C-terminal domain, eukaryotic/bacterialDomain
C, O
IPR016174Di-haem cytochrome, transmembraneHomologous Superfamily
C, O
IPR005798Cytochrome b/b6, C-terminalDomain
C, O
IPR048259Cytochrome b/b6, N-terminal domain, eukaryotic/bacterialDomain
C, O
IPR030689Cytochrome bFamily
C, O
IPR005797Cytochrome b/b6, N-terminal domainDomain
PA [auth q],
TA [auth v]
IPR031314Deoxynucleoside kinase domainDomain
PA [auth q],
TA [auth v]
IPR015828NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrialFamily
PA [auth q],
TA [auth v]
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
QA [auth r]IPR009346GRIM-19Family
RB [auth Ai],
SA [auth u]
IPR019173NADH:ubiquinone oxidoreductase, NDUFB5/SGDH subunitFamily
UA [auth w]IPR038532NADH dehydrogenase ubiquinone Fe-S protein 4-like superfamilyHomologous Superfamily
UA [auth w]IPR006885NADH dehydrogenase ubiquinone Fe-S protein 4 mitochondrial-likeFamily
VA [auth x]IPR019401Zinc finger, CHCC-typeDomain
VA [auth x]IPR016668NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrialFamily
XA [auth 1]IPR004203Cytochrome c oxidase subunit IV familyFamily
XA [auth 1]IPR013288Cytochrome c oxidase subunit IVFamily
XA [auth 1]IPR036639Cytochrome c oxidase subunit IV superfamilyHomologous Superfamily
YA [auth 2]IPR003204Cytochrome c oxidase, subunit Va/VIFamily
YA [auth 2]IPR036545Cytochrome c oxidase, subunit Va/VI superfamilyHomologous Superfamily
ZA [auth 3]IPR002124Cytochrome c oxidase, subunit VbFamily
ZA [auth 3]IPR036972Cytochrome c oxidase, subunit Vb superfamilyHomologous Superfamily
D, P
IPR036909Cytochrome c-like domain superfamilyHomologous Superfamily
D, P
IPR002326Cytochrome c1Family
D, P
IPR009056Cytochrome c-like domainDomain
D, P
IPR021157Cytochrome c1, transmembrane anchor, C-terminalHomologous Superfamily
AB [auth 4]IPR018507Cytochrome c oxidase, subunit VIa, conserved siteConserved Site
AB [auth 4]IPR036418Cytochrome c oxidase, subunit VIa superfamilyHomologous Superfamily
AB [auth 4]IPR001349Cytochrome c oxidase, subunit VIaFamily
BB [auth 5]IPR036549Cytochrome c oxidase, subunit VIb superfamilyHomologous Superfamily
BB [auth 5]IPR048280Cytochrome oxidase c subunit VIb-likeFamily
BB [auth 5]IPR003213Cytochrome c oxidase, subunit VIbFamily
CB [auth 6]IPR037169Mitochondrial cytochrome c oxidase subunit VIc/VIIs superfamilyHomologous Superfamily
CB [auth 6]IPR034884Mitochondrial cytochrome c oxidase subunit VIc/VIIsDomain
DB [auth 7]IPR003177Cytochrome c oxidase subunit VIIa, metazoaFamily
DB [auth 7]IPR036539Cytochrome c oxidase, subunit VIIa superfamilyHomologous Superfamily
DB [auth 7]IPR039297Cytochrome c oxidase subunit VIIFamily
EB [auth 8]IPR023272Cytochrome C oxidase, subunit VIIB domain superfamilyHomologous Superfamily
EB [auth 8]IPR008433Cytochrome C oxidase, subunit VIIBFamily
FB [auth 9]IPR036636Cytochrome c oxidase subunit VIIc superfamilyHomologous Superfamily
FB [auth 9]IPR004202Cytochrome c oxidase subunit VIIcFamily
GB [auth s]IPR003205Cytochrome c oxidase, subunit 8Family
GB [auth s]IPR036548Cytochrome c oxidase, subunit 8 superfamilyHomologous Superfamily
HB [auth y]IPR036927Cytochrome c oxidase-like, subunit I superfamilyHomologous Superfamily
HB [auth y]IPR000883Cytochrome c oxidase subunit IFamily
HB [auth y]IPR023615Cytochrome c oxidase, subunit I, copper-binding siteBinding Site
HB [auth y]IPR023616Cytochrome c oxidase-like, subunit I domainDomain
HB [auth y]IPR033944Cytochrome c oxidase subunit I domainDomain
IB [auth z]IPR011759Cytochrome C oxidase subunit II, transmembrane domainDomain
IB [auth z]IPR036257Cytochrome C oxidase subunit II, transmembrane domain superfamilyHomologous Superfamily
IB [auth z]IPR034210Cytochrome c oxidase subunit 2, C-terminalDomain
IB [auth z]IPR045187Cytochrome c/quinol oxidase subunit IIFamily
IB [auth z]IPR002429Cytochrome c oxidase subunit II-like C-terminalDomain
IB [auth z]IPR008972CupredoxinHomologous Superfamily
IB [auth z]IPR001505Copper centre Cu(A)Binding Site
IB [auth z]IPR014222Cytochrome c oxidase, subunit IIDomain
LB [auth Ac]IPR017384NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex subunit 1Family
PB [auth Ag]IPR039205NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11Family
SB [auth Aj]IPR019377NADH-ubiquinone oxidoreductase, subunit 10Family
SB [auth Aj]IPR039993NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10Family
TB [auth Ak]IPR033034NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9Family
TB [auth Ak]IPR008011Complex 1 LYR protein domainDomain
TB [auth Ak]IPR045292NDUFB9, LYR domainDomain
VB [auth Am]IPR032773Protein MGARP, N-terminalDomain
VB [auth Am]IPR026093Protein MGARPFamily
WB [auth An]IPR010625CHCHDomain
WB [auth An]IPR016680NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 8Family
G, S
IPR004205Cytochrome b-c1 complex subunit 8Family
G, S
IPR036642Cytochrome b-c1 complex subunit 8 superfamilyHomologous Superfamily
H, T
IPR003422Cytochrome b-c1 complex, subunit 6Family
H, T
IPR023184Ubiquinol-cytochrome C reductase hinge domainDomain
H, T
IPR036811Ubiquinol-cytochrome C reductase hinge domain superfamilyHomologous Superfamily
I, U
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyHomologous Superfamily
I, U
IPR014349Rieske iron-sulphur proteinFamily
I, U
IPR011070Globular protein, non-globular alpha/beta subunitHomologous Superfamily
I, U
IPR004192Cytochrome b-c1 complex subunit Rieske, transmembrane domainDomain
I, U
IPR015248Ubiquinol-cytochrome c reductase iron-sulphur subunit, N-terminalDomain
I, U
IPR017941Rieske [2Fe-2S] iron-sulphur domainDomain
I, U
IPR005805Rieske iron-sulphur protein, C-terminalDomain
I, U
IPR037008Cytochrome bc1 complex subunit Rieske, transmembrane domain superfamilyHomologous Superfamily
I, U
IPR006317Ubiquinol-cytochrome c reductase, iron-sulphur subunitDomain