Cryo-EM structure of the Lysenin Pore
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| I | Helicase_C | e5gaqI1 | A: alpha arrays | X: MocoBD/DmpA-related | H: MocoBD/DmpA-related | T: Retrovirus capsid protein-C | F: Helicase_C | ECOD (v295.2) |
| H | Helicase_C | e5gaqH1 | A: alpha arrays | X: MocoBD/DmpA-related | H: MocoBD/DmpA-related | T: Retrovirus capsid protein-C | F: Helicase_C | ECOD (v295.2) |
| G | Helicase_C | e5gaqG1 | A: alpha arrays | X: MocoBD/DmpA-related | H: MocoBD/DmpA-related | T: Retrovirus capsid protein-C | F: Helicase_C | ECOD (v295.2) |
| F | Helicase_C | e5gaqF1 | A: alpha arrays | X: MocoBD/DmpA-related | H: MocoBD/DmpA-related | T: Retrovirus capsid protein-C | F: Helicase_C | ECOD (v295.2) |
| E | Helicase_C | e5gaqE1 | A: alpha arrays | X: MocoBD/DmpA-related | H: MocoBD/DmpA-related | T: Retrovirus capsid protein-C | F: Helicase_C | ECOD (v295.2) |
| D | Helicase_C | e5gaqD1 | A: alpha arrays | X: MocoBD/DmpA-related | H: MocoBD/DmpA-related | T: Retrovirus capsid protein-C | F: Helicase_C | ECOD (v295.2) |
| C | Helicase_C | e5gaqC1 | A: alpha arrays | X: MocoBD/DmpA-related | H: MocoBD/DmpA-related | T: Retrovirus capsid protein-C | F: Helicase_C | ECOD (v295.2) |
| B | Helicase_C | e5gaqB1 | A: alpha arrays | X: MocoBD/DmpA-related | H: MocoBD/DmpA-related | T: Retrovirus capsid protein-C | F: Helicase_C | ECOD (v295.2) |
| A | Helicase_C | e5gaqA1 | A: alpha arrays | X: MocoBD/DmpA-related | H: MocoBD/DmpA-related | T: Retrovirus capsid protein-C | F: Helicase_C | ECOD (v295.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| I | 2.80.10.50 | Mainly Beta | Trefoil | Trefoil (Acidic Fibroblast Growth Factor, subunit A) | CATH (4.3.0) | |
| H | 2.80.10.50 | Mainly Beta | Trefoil | Trefoil (Acidic Fibroblast Growth Factor, subunit A) | CATH (4.3.0) | |
| G | 2.80.10.50 | Mainly Beta | Trefoil | Trefoil (Acidic Fibroblast Growth Factor, subunit A) | CATH (4.3.0) | |
| F | 2.80.10.50 | Mainly Beta | Trefoil | Trefoil (Acidic Fibroblast Growth Factor, subunit A) | CATH (4.3.0) | |
| E | 2.80.10.50 | Mainly Beta | Trefoil | Trefoil (Acidic Fibroblast Growth Factor, subunit A) | CATH (4.3.0) | |
| D | 2.80.10.50 | Mainly Beta | Trefoil | Trefoil (Acidic Fibroblast Growth Factor, subunit A) | CATH (4.3.0) | |
| C | 2.80.10.50 | Mainly Beta | Trefoil | Trefoil (Acidic Fibroblast Growth Factor, subunit A) | CATH (4.3.0) | |
| B | 2.80.10.50 | Mainly Beta | Trefoil | Trefoil (Acidic Fibroblast Growth Factor, subunit A) | CATH (4.3.0) | |
| A | 2.80.10.50 | Mainly Beta | Trefoil | Trefoil (Acidic Fibroblast Growth Factor, subunit A) | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Lysenin | - | - |
Membrane Protein Annotation: OPM OPM Database Homepage
| Chains | External Link | Type | Class | Superfamily | Family |
|---|---|---|---|---|---|
| OPM | Transmembrane | Beta-barrel transmembrane | Pore-forming beta-sheet toxins | Lysenin (n=18,S=18) |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
| Chains | Resource Link | Group | Subgroup | Protein |
|---|---|---|---|---|
| mpstruc | TRANSMEMBRANE PROTEINS: BETA-BARREL | Adventitious Membrane Proteins: Beta-sheet Pore-forming Toxins/Attack Complexes | Lysenin Pore complex |