5EJO

Crystal structure of the winged helix domain in Chromatin assembly factor 1 subunit p90

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	KOG4363	e5ejoA1	A: alpha arrays	X: HTH	H: HTH	T: winged	F: KOG4363	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF21796	Chromatin assembly factor 1 subunit Cac1, C-terminal domain (Cac1_C)	Chromatin assembly factor 1 subunit Cac1, C-terminal domain	Chromatin assembly factor 1 (CAF-1) is a histone H3-H4 chaperone that deposits newly synthesized histone (H3-H4)2 tetramers during nucleosome assembly. CAF-1 complex is composed of several subunits. This entry represents the C-terminal domain of subu ...	Chromatin assembly factor 1 (CAF-1) is a histone H3-H4 chaperone that deposits newly synthesized histone (H3-H4)2 tetramers during nucleosome assembly. CAF-1 complex is composed of several subunits. This entry represents the C-terminal domain of subunit Cac1 that adopts a winged helix fold and binds to DNA in a sequence-independent manner [1]. This domain was also found to mediate the (H3-H4)2 tetramerisation [2].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Chromatin assembly factor 1 subunit p90	-	protein-containing complex organization protein-DNA complex assembly protein-DNA complex organization cellular component organization cellular component biogenesis cellular component assembly chromatin organization protein-containing complex assembly chromatin remodeling cellular process cellular component organization or biogenesis nucleosome assembly nucleosome organization nucleobase-containing compound metabolic process protein-containing complex organization protein-DNA complex assembly protein-DNA complex organization cellular component organization cellular component biogenesis cellular component assembly chromatin organization protein-containing complex assembly chromatin remodeling cellular process cellular component organization or biogenesis nucleosome assembly nucleosome organization nucleobase-containing compound metabolic process organic cyclic compound metabolic process DNA replication organic substance metabolic process metabolic process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process cellular response to stimulus response to stimulus cellular response to stress DNA damage response response to stress DNA repair DNA replication-dependent chromatin assembly	intracellular organelle intracellular anatomical structure organelle intracellular non-membrane-bounded organelle chromosome, centromeric region chromosome cellular anatomical entity chromosomal region non-membrane-bounded organelle protein-containing complex CAF-1 complex protein-DNA complex nucleosome chromatin intracellular organelle intracellular anatomical structure organelle intracellular non-membrane-bounded organelle chromosome, centromeric region chromosome cellular anatomical entity chromosomal region non-membrane-bounded organelle protein-containing complex CAF-1 complex protein-DNA complex nucleosome chromatin membrane-bounded organelle nucleus intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR048800	Chromatin assembly factor 1 subunit Cac1-like, C-terminal domain	Domain
A	IPR022043	Chromatin assembly factor 1 subunit A	Family

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.