5ECD

Structure of the Shigella flexneri VapC mutant D98N crystal form 1

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF01850e5ecdA1 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: PIN domain-likeF: PF01850ECOD (1.6)
BPF01850e5ecdB1 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: PIN domain-likeF: PF01850ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.40.50.1010 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold 5'-nucleaseCATH (4.3.0)
B3.40.50.1010 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold 5'-nucleaseCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF01850PIN domain (PIN)PIN domain- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
tRNA(fMet)-specific endonuclease VapC - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR002716PIN domainDomain
A, B
IPR029060PIN-like domain superfamilyHomologous Superfamily
A, B
IPR022907VapC familyFamily