5DTL | pdb_00005dtl

Crystal structure of mEos2-A69T fluorescent protein

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
C	d5dtlc_	Alpha and beta proteins (a+b)	GFP-like	GFP-like	automated matches	automated matches	Lobed brain coral (Lobophyllia hemprichii ) [TaxId: 46758 ],	SCOPe (2.08)
D	d5dtld_	Alpha and beta proteins (a+b)	GFP-like	GFP-like	automated matches	automated matches	Lobed brain coral (Lobophyllia hemprichii ) [TaxId: 46758 ],	SCOPe (2.08)
E	d5dtle_	Alpha and beta proteins (a+b)	GFP-like	GFP-like	automated matches	automated matches	Lobed brain coral (Lobophyllia hemprichii ) [TaxId: 46758 ],	SCOPe (2.08)
F	d5dtlf_	Alpha and beta proteins (a+b)	GFP-like	GFP-like	automated matches	automated matches	Lobed brain coral (Lobophyllia hemprichii ) [TaxId: 46758 ],	SCOPe (2.08)
G	d5dtlg_	Alpha and beta proteins (a+b)	GFP-like	GFP-like	automated matches	automated matches	Lobed brain coral (Lobophyllia hemprichii ) [TaxId: 46758 ],	SCOPe (2.08)
I	d5dtli_	Alpha and beta proteins (a+b)	GFP-like	GFP-like	automated matches	automated matches	Lobed brain coral (Lobophyllia hemprichii ) [TaxId: 46758 ],	SCOPe (2.08)
J	d5dtlj_	Alpha and beta proteins (a+b)	GFP-like	GFP-like	automated matches	automated matches	Lobed brain coral (Lobophyllia hemprichii ) [TaxId: 46758 ],	SCOPe (2.08)
L	d5dtll_	Alpha and beta proteins (a+b)	GFP-like	GFP-like	automated matches	automated matches	Lobed brain coral (Lobophyllia hemprichii ) [TaxId: 46758 ],	SCOPe (2.08)
K	d5dtlk_	Alpha and beta proteins (a+b)	GFP-like	GFP-like	automated matches	automated matches	Lobed brain coral (Lobophyllia hemprichii ) [TaxId: 46758 ],	SCOPe (2.08)
H	d5dtlh_	Alpha and beta proteins (a+b)	GFP-like	GFP-like	automated matches	automated matches	Lobed brain coral (Lobophyllia hemprichii ) [TaxId: 46758 ],	SCOPe (2.08)
B	d5dtlb_	Alpha and beta proteins (a+b)	GFP-like	GFP-like	automated matches	automated matches	Lobed brain coral (Lobophyllia hemprichii ) [TaxId: 46758 ],	SCOPe (2.08)
A	d5dtla_	Alpha and beta proteins (a+b)	GFP-like	GFP-like	automated matches	automated matches	Lobed brain coral (Lobophyllia hemprichii ) [TaxId: 46758 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
C	SCOP2B Superfamily	GFP-like	8083484	3000576	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	GFP-like	8083484	3000576	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	GFP-like	8083484	3000576	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	GFP-like	8083484	3000576	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	GFP-like	8083484	3000576	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	GFP-like	8083484	3000576	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	GFP-like	8083484	3000576	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	GFP-like	8083484	3000576	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	GFP-like	8083484	3000576	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	GFP-like	8083484	3000576	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	GFP-like	8083484	3000576	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	GFP-like	8083484	3000576	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C	SH3_9	e5dtlC1	A: alpha bundles	X: ADP-ribosylation	H: ADP-ribosylation	T: ADP-ribosylation	F: SH3_9	ECOD (develop294)
D	SH3_9	e5dtlD1	A: alpha bundles	X: ADP-ribosylation	H: ADP-ribosylation	T: ADP-ribosylation	F: SH3_9	ECOD (develop294)
E	SH3_9	e5dtlE1	A: alpha bundles	X: ADP-ribosylation	H: ADP-ribosylation	T: ADP-ribosylation	F: SH3_9	ECOD (develop294)
F	SH3_9	e5dtlF1	A: alpha bundles	X: ADP-ribosylation	H: ADP-ribosylation	T: ADP-ribosylation	F: SH3_9	ECOD (develop294)
G	SH3_9	e5dtlG1	A: alpha bundles	X: ADP-ribosylation	H: ADP-ribosylation	T: ADP-ribosylation	F: SH3_9	ECOD (develop294)
I	SH3_9	e5dtlI1	A: alpha bundles	X: ADP-ribosylation	H: ADP-ribosylation	T: ADP-ribosylation	F: SH3_9	ECOD (develop294)
J	SH3_9	e5dtlJ1	A: alpha bundles	X: ADP-ribosylation	H: ADP-ribosylation	T: ADP-ribosylation	F: SH3_9	ECOD (develop294)
L	SH3_9	e5dtlL1	A: alpha bundles	X: ADP-ribosylation	H: ADP-ribosylation	T: ADP-ribosylation	F: SH3_9	ECOD (develop294)
K	SH3_9	e5dtlK1	A: alpha bundles	X: ADP-ribosylation	H: ADP-ribosylation	T: ADP-ribosylation	F: SH3_9	ECOD (develop294)
H	SH3_9	e5dtlH1	A: alpha bundles	X: ADP-ribosylation	H: ADP-ribosylation	T: ADP-ribosylation	F: SH3_9	ECOD (develop294)
B	SH3_9	e5dtlB1	A: alpha bundles	X: ADP-ribosylation	H: ADP-ribosylation	T: ADP-ribosylation	F: SH3_9	ECOD (develop294)
A	SH3_9	e5dtlA1	A: alpha bundles	X: ADP-ribosylation	H: ADP-ribosylation	T: ADP-ribosylation	F: SH3_9	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
C	2.40.155.10	Mainly Beta	Beta Barrel	Green Fluorescent Protein	Green fluorescent protein	CATH (4.3.0)
D	2.40.155.10	Mainly Beta	Beta Barrel	Green Fluorescent Protein	Green fluorescent protein	CATH (4.3.0)
E	2.40.155.10	Mainly Beta	Beta Barrel	Green Fluorescent Protein	Green fluorescent protein	CATH (4.3.0)
F	2.40.155.10	Mainly Beta	Beta Barrel	Green Fluorescent Protein	Green fluorescent protein	CATH (4.3.0)
G	2.40.155.10	Mainly Beta	Beta Barrel	Green Fluorescent Protein	Green fluorescent protein	CATH (4.3.0)
I	2.40.155.10	Mainly Beta	Beta Barrel	Green Fluorescent Protein	Green fluorescent protein	CATH (4.3.0)
J	2.40.155.10	Mainly Beta	Beta Barrel	Green Fluorescent Protein	Green fluorescent protein	CATH (4.3.0)
L	2.40.155.10	Mainly Beta	Beta Barrel	Green Fluorescent Protein	Green fluorescent protein	CATH (4.3.0)
K	2.40.155.10	Mainly Beta	Beta Barrel	Green Fluorescent Protein	Green fluorescent protein	CATH (4.3.0)
H	2.40.155.10	Mainly Beta	Beta Barrel	Green Fluorescent Protein	Green fluorescent protein	CATH (4.3.0)
B	2.40.155.10	Mainly Beta	Beta Barrel	Green Fluorescent Protein	Green fluorescent protein	CATH (4.3.0)
A	2.40.155.10	Mainly Beta	Beta Barrel	Green Fluorescent Protein	Green fluorescent protein	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	Green to red photoconvertible GFP-like protein EosFP	-	bioluminescence metabolic process cellular process generation of precursor metabolites and energy	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR000786	Green fluorescent protein, GFP	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR011584	Green fluorescent protein-related	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR009017	Green fluorescent protein	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.