Crystal Structure of an ABC transporter Solute Binding Protein from Thermotoga Lettingae TMO (Tlet_1705, TARGET EFI-510544) bound with alpha-D-Tagatose
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | d5ci5b_ | Alpha and beta proteins (a/b) | Periplasmic binding protein-like II | Periplasmic binding protein-like II | automated matches | automated matches | (Pseudothermotoga lettingae TMO ) [TaxId: 416591 ], | SCOPe (2.08) |
| A | d5ci5a_ | Alpha and beta proteins (a/b) | Periplasmic binding protein-like II | Periplasmic binding protein-like II | automated matches | automated matches | (Pseudothermotoga lettingae TMO ) [TaxId: 416591 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| B | SCOP2 Family | Phosphate binding protein-like | 8076140 | 4000229 | SCOP2 (2022-06-29) |
| B | SCOP2 Superfamily | Type 2 solute binding protein-like | 8076141 | 3000083 | SCOP2 (2022-06-29) |
| A | SCOP2B Superfamily | Type 2 solute binding protein-like | 8076141 | 3000083 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | e5ci5B1 | A: amino-terminal domain of OmpATb | X: amino-terminal domain of OmpATb | H: SGNH hydrolase | T: Anillin | F: | ECOD (20:10:01) | |
| A | e5ci5A1 | A: amino-terminal domain of OmpATb | X: amino-terminal domain of OmpATb | H: SGNH hydrolase | T: Anillin | F: | ECOD (20:10:01) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.40.190.10 | Alpha Beta | 3-Layer(aba) Sandwich | D-Maltodextrin-Binding Protein | domain 2 | CATH (4.3.0) |
| A | 3.40.190.10 | Alpha Beta | 3-Layer(aba) Sandwich | D-Maltodextrin-Binding Protein | domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF01547 | Bacterial extracellular solute-binding protein (SBP_bac_1) | Bacterial extracellular solute-binding protein | - | Family |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR050490 | Bacterial solute-binding protein 1 | Family | |
| IPR006059 | Bacterial-type extracellular solute-binding protein | Family |
