5B3V | pdb_00005b3v

Crystal structure of biliverdin reductase in complex with biliverdin and NADP+ from Synechocystis sp. PCC 6803

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
De5b3vD1 A: Reverse ferredoxinX: beta-propellerH: 5-bladedT: PentapeptideF:ECOD (20:10:01)
Ce5b3vC1 A: Reverse ferredoxinX: beta-propellerH: 5-bladedT: PentapeptideF:ECOD (20:10:01)
B [auth A]e5b3vA1 A: Reverse ferredoxinX: beta-propellerH: 5-bladedT: PentapeptideF:ECOD (20:10:01)
A [auth B]e5b3vB1 A: Reverse ferredoxinX: beta-propellerH: 5-bladedT: PentapeptideF:ECOD (20:10:01)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth B],
B [auth A],
C,
D		PF01408Oxidoreductase family, NAD-binding Rossmann fold (GFO_IDH_MocA)Oxidoreductase family, NAD-binding Rossmann foldThis entry represents the N-terminal domain of a group of enzymes that utilise NADP or NAD, known as the GFO/IDH/MOCA family, which includes enzymes that catalyse different chemical reactions such as oxidation and reduction of carbohydrates, oxidatio ...This entry represents the N-terminal domain of a group of enzymes that utilise NADP or NAD, known as the GFO/IDH/MOCA family, which includes enzymes that catalyse different chemical reactions such as oxidation and reduction of carbohydrates, oxidation of trans-dihydrodiols, reduction of biliverdin and hydrolysation of glycosidic bonds. This domain adopts a a typical Rossmann fold.
Domain
A [auth B],
B [auth A],
C,
D		PF02894Oxidoreductase family, C-terminal alpha/beta domain (GFO_IDH_MocA_C)Oxidoreductase family, C-terminal alpha/beta domainThis family of enzymes utilise NADP or NAD. This family is called the GFO/IDH/MOCA family in swiss-prot. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth B],
B [auth A],
C,
D		Biliverdin reductase - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth B],
B [auth A],
C,
D		IPR036291NAD(P)-binding domain superfamilyHomologous Superfamily
A [auth B],
B [auth A],
C,
D		IPR004104Gfo/Idh/MocA-like oxidoreductase, C-terminalDomain
A [auth B],
B [auth A],
C,
D		IPR051450Gfo/Idh/MocA OxidoreductasesFamily
A [auth B],
B [auth A],
C,
D		IPR000683Gfo/Idh/MocA-like oxidoreductase, N-terminalDomain