5AZE | pdb_00005aze

Fab fragment of calcium-dependent antigen binding antibody, 6RL#9


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth L]CDP-OH_P_transfe5azeL1 A: a/b three-layered sandwichesX: P-loop domains-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: CDP-OH_P_transfECOD (v294.1)
B [auth H]CDP-OH_P_transfe5azeH1 A: a/b three-layered sandwichesX: P-loop domains-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: CDP-OH_P_transfECOD (v294.1)
B [auth H]EF-hand_1, EF-hand_6, EF-hand_7e5azeH2 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: SAM/DNA-glycosylaseT: SAM domain-likeF: EF-hand_1, EF-hand_6, EF-hand_7ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A [auth L]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
B [auth H]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
A [auth L]6RL#9 Fab L-LAMBDA Homo sapiens (human) IGLV1-40*01, IGLV1-40*03, IGLJ2*01, IGLJ3*01, IGLC2*01, IGLC2*02, IGLC3*04 V-DOMAIN V-LAMBDA, C-DOMAIN C-LAMBDA IG FAB-GAMMA-1_LAMBDA IMGT (202614-0)
B [auth H]6RL#9 Fab VH-CH1 Homo sapiens (human) IGHV1-46*01, IGHV1-46*03, IGHJ4*01, IGHJ4*02, IGHJ4*03, IGHG1*01, IGHG1*02, IGHG1*04, IGHG1*05 V-DOMAIN VH, C-DOMAIN CH1 IG FAB-GAMMA-1_LAMBDA IMGT (202614-0)

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
B [auth H]PCA Parent Component: GLN

RESIDAA0031

PSI-MOD :  2-pyrrolidone-5-carboxylic acid (Gln) MOD:00040 , 2-pyrrolidone-5-carboxylic acid (Glu) MOD:00420