5AWS | pdb_00005aws

Crystal structure of the SGIP1 mu homology domain in the P1 space group

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	mu adaptin domain-like	8051823	3000810	SCOP2B (2022-06-29)
A	SCOP2 Family	Muniscin C-terminal domain-like	8044649	4004061	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	mu adaptin domain-like	8051823	3000810	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B		e5awsB1	A: MocoBD/DmpA-related	X: MocoBD/DmpA-related	H: Retrovirus capsid protein-C	T: DEAD	F:	ECOD (20:10:01)
A		e5awsA1	A: MocoBD/DmpA-related	X: MocoBD/DmpA-related	H: Retrovirus capsid protein-C	T: DEAD	F:	ECOD (20:10:01)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF10291	Muniscin C-terminal mu homology domain (muHD)	Muniscin C-terminal mu homology domain	The muniscins are a family of endocytic adaptors that is conserved from yeast to humans.This C-terminal domain is structurally similar to mu homology domains, and is the region of the muniscin proteins involved in the interactions with the endocytic ...	The muniscins are a family of endocytic adaptors that is conserved from yeast to humans.This C-terminal domain is structurally similar to mu homology domains, and is the region of the muniscin proteins involved in the interactions with the endocytic adaptor-scaffold proteins Ede1-eps15. This interaction influences muniscin localisation. The muniscins provide a combined adaptor-membrane-tubulation activity that is important for regulating endocytosis.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	SH3-containing GRB2-like protein 3-interacting protein 1	SH3 domain binding protein binding binding protein domain specific binding cytoskeletal protein binding microtubule binding tubulin binding phospholipid binding lipid binding	synaptic vesicle endocytosis import into cell cellular localization transport synaptic vesicle cycle establishment of localization vesicle-mediated transport presynaptic endocytosis vesicle-mediated transport in synapse synaptic vesicle recycling localization establishment of localization in cell cellular process endocytosis synaptic vesicle endocytosis import into cell cellular localization transport synaptic vesicle cycle establishment of localization vesicle-mediated transport presynaptic endocytosis vesicle-mediated transport in synapse synaptic vesicle recycling localization establishment of localization in cell cellular process endocytosis regulation of localization positive regulation of cellular component organization regulation of cellular process regulation of cellular component organization positive regulation of biological process cellular component organization positive regulation of endocytosis cellular component organization or biogenesis positive regulation of receptor-mediated endocytosis positive regulation of cellular process regulation of endocytosis regulation of biological process regulation of transport biological regulation regulation of receptor-mediated endocytosis regulation of vesicle-mediated transport positive regulation of transport receptor-mediated endocytosis positive regulation of feeding behavior multicellular organismal process feeding behavior regulation of behavior behavior positive regulation of behavior positive regulation of multicellular organismal process regulation of multicellular organismal process regulation of feeding behavior multicellular organismal-level homeostasis homeostatic process energy homeostasis clathrin-dependent endocytosis response to nutrient levels response to stimulus response to dietary excess	cellular anatomical structure clathrin-coated pit membrane endomembrane system membrane-bounded organelle intracellular anatomical structure intracellular vesicle intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle organelle clathrin-coated vesicle coated vesicle cytoplasm cellular anatomical structure clathrin-coated pit membrane endomembrane system membrane-bounded organelle intracellular anatomical structure intracellular vesicle intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle organelle clathrin-coated vesicle coated vesicle cytoplasm vesicle cytosol cell periphery plasma membrane presynapse synapse cell junction protein-containing complex vesicle coat membrane protein complex membrane coat bounding membrane of organelle AP-type membrane coat adaptor complex AP-2 adaptor complex vesicle membrane endocytic vesicle membrane clathrin vesicle coat endocytic vesicle clathrin-coated vesicle membrane clathrin coat of coated pit clathrin coat of endocytic vesicle clathrin-coated endocytic vesicle membrane plasma membrane protein complex coated membrane clathrin-coated endocytic vesicle clathrin coat cytoplasmic vesicle membrane coated vesicle membrane organelle membrane clathrin adaptor complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR037984	SGIP1, mu-homology domain	Domain
A, B	IPR018808	Muniscin, C-terminal	Domain
A, B	IPR036168	AP-2 complex subunit mu, C-terminal superfamily	Homologous Superfamily
A, B	IPR028565	Mu homology domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B	Pharos: Q9BQI5	Alcoholic Intoxication, Chronic attention deficit hyperactivity disorder, inattentive type glioblastoma malignant ependymoma non-small cell lung carcinoma pilocytic astrocytoma subependymal giant cell astrocytoma Alzheimer disease atypical teratoid rhabdoid tumor interstitial cystitis malignant glioma oligodendroglioma pituitary cancer astrocytic tumor endogenous depression Alcoholic Intoxication, Chronic attention deficit hyperactivity disorder, inattentive type glioblastoma malignant ependymoma non-small cell lung carcinoma pilocytic astrocytoma subependymal giant cell astrocytoma Alzheimer disease atypical teratoid rhabdoid tumor interstitial cystitis malignant glioma oligodendroglioma pituitary cancer astrocytic tumor endogenous depression large cell medulloblastoma medulloblastoma Pick disease primitive neuroectodermal tumor

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.