5AKO | pdb_00005ako

The complex of Tse2 and Tsi2 from Pseudomonas aeruginosa


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BPI3_PI4_kinasee5akoB1 A: a/b three-layered sandwichesX: Restriction endonuclease-likeH: Restriction endonuclease-likeT: Restriction endonuclease-likeF: PI3_PI4_kinaseECOD (v294.1)
API3_PI4_kinasee5akoA1 A: a/b three-layered sandwichesX: Restriction endonuclease-likeH: Restriction endonuclease-likeT: Restriction endonuclease-likeF: PI3_PI4_kinaseECOD (v294.1)
DADPRTs_Tse2e5akoD1 A: a/b three-layered sandwichesX: ADP-ribosylationH: ADP-ribosylationT: ADP-ribosylationF: ADPRTs_Tse2ECOD (v294.1)
CSec63e5akoC1 A: a/b three-layered sandwichesX: ADP-ribosylationH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Sec63ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B1.10.287.2500 Mainly Alpha Orthogonal Bundle Helix Hairpins CATH (4.3.0)
A1.10.287.2500 Mainly Alpha Orthogonal Bundle Helix Hairpins CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF21643T6SS, Immune protein Tsi2-like (T6SS_Tsi2-like)T6SS, Immune protein Tsi2-like- Family
C, D
PF18648Tse2 ADP-ribosyltransferase toxin (ADPRTs_Tse2)Tse2 ADP-ribosyltransferase toxinTse2 from P. aeruginosa has structural features similar to ADP-ribosylating toxins. It is a cytoactive toxin secreted by a type six secretion apparatus of Pseudomonas aeruginosa and found mostly in gamma proteobacteria. It naturally attacks a target ...Tse2 from P. aeruginosa has structural features similar to ADP-ribosylating toxins. It is a cytoactive toxin secreted by a type six secretion apparatus of Pseudomonas aeruginosa and found mostly in gamma proteobacteria. It naturally attacks a target in the cytoplasm of bacterial cells. Structural analysis shows similarity between Tse2 and nicotinamide adenine dinucleotide (NAD)-dependent enzymes from bacteria, notably the mono-ADP-ribosyltransferase toxins (ADPRTs). Furthermore, it revealed that the Tse2 active site is occluded upon binding the cognate immunity protein Tsi2. The abrogation of toxicity for the R14A, S80A, and H122A mutant Tse2 proteins indicates the importance of these amino acids in the mechanism of Tse2 toxicity and, given their conservation with NAD-reactive enzymes, also supports their assignment as being involved in a catalytic reaction [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
TSI2- - -
C, D
TSE2- -