5AHV | pdb_00005ahv

Cryo-EM structure of helical ANTH and ENTH tubules on PI(4,5)P2-containing membranes

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: OPM

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A [auth E]	SCOP2 Family	ENTH domain	8067887	4001355	SCOP2 (2022-06-29)
A [auth E]	SCOP2 Superfamily	ENTH/VHS domain-like	8067888	3000164	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B [auth F]	Ribosomal_S19	e5ahvF1	A: alpha bundles	X: HAD domain-like	H: HAD domain-related	T: PIN domain-like	F: Ribosomal_S19	ECOD (develop294)
A [auth E]	Ribosomal_S19	e5ahvE1	A: alpha bundles	X: HAD domain-like	H: HAD domain-related	T: PIN domain-like	F: Ribosomal_S19	ECOD (develop294)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B [auth F]	PF07651	ANTH domain (ANTH)	ANTH domain	-	Repeat
A [auth E]	PF01417	ENTH domain (ENTH)	ENTH domain	-	Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B [auth F]	ANTH DOMAIN OF ENDOCYTIC ADAPTOR SLA2	phosphatidylinositol-3,5-bisphosphate binding ion binding binding anion binding phosphatidylinositol bisphosphate binding phospholipid binding lipid binding phosphatidylinositol phosphate binding phosphatidylinositol binding small molecule binding clathrin binding protein binding clathrin light chain binding cytoskeletal protein binding phosphatidylinositol-3,5-bisphosphate binding ion binding binding anion binding phosphatidylinositol bisphosphate binding phospholipid binding lipid binding phosphatidylinositol phosphate binding phosphatidylinositol binding small molecule binding clathrin binding protein binding clathrin light chain binding cytoskeletal protein binding actin binding protein-containing complex binding actin filament binding phosphatidylinositol-3,4-bisphosphate binding cargo adaptor activity protein-macromolecule adaptor activity molecular adaptor activity clathrin-cargo adaptor activity	actin cortical patch organization actin cytoskeleton organization cortical cytoskeleton organization actin cortical patch assembly cellular component organization cellular component biogenesis organelle organization cellular component assembly cortical actin cytoskeleton organization actin filament-based process cellular process cellular component organization or biogenesis cytoskeleton organization regulation of Arp2/3 complex-mediated actin nucleation actin cortical patch organization actin cytoskeleton organization cortical cytoskeleton organization actin cortical patch assembly cellular component organization cellular component biogenesis organelle organization cellular component assembly cortical actin cytoskeleton organization actin filament-based process cellular process cellular component organization or biogenesis cytoskeleton organization regulation of Arp2/3 complex-mediated actin nucleation regulation of cytoskeleton organization regulation of cellular component organization regulation of cellular process regulation of actin filament-based process negative regulation of biological process regulation of actin nucleation negative regulation of cellular process negative regulation of supramolecular fiber organization negative regulation of actin nucleation negative regulation of Arp2/3 complex-mediated actin nucleation regulation of biological process regulation of actin filament organization negative regulation of cellular component organization negative regulation of cytoskeleton organization actin filament organization biological regulation Arp2/3 complex-mediated actin nucleation regulation of organelle organization negative regulation of organelle organization regulation of actin cytoskeleton organization regulation of supramolecular fiber organization actin nucleation supramolecular fiber organization clathrin coat assembly protein-containing complex organization protein-containing complex assembly localization import into cell transport endocytosis establishment of localization vesicle-mediated transport	cell cortex intracellular anatomical structure cortical cytoskeleton intracellular membraneless organelle actin cytoskeleton cell periphery intracellular organelle endocytic patch cellular anatomical structure cytoskeleton organelle membraneless organelle cortical actin cytoskeleton actin cortical patch cell cortex intracellular anatomical structure cortical cytoskeleton intracellular membraneless organelle actin cytoskeleton cell periphery intracellular organelle endocytic patch cellular anatomical structure cytoskeleton organelle membraneless organelle cortical actin cytoskeleton actin cortical patch cytoplasm incipient cellular bud site site of polarized growth cellular bud cellular bud tip membrane-bounded organelle intracellular vesicle intracellular membrane-bounded organelle cytoplasmic vesicle clathrin-coated vesicle coated vesicle vesicle cell projection mating projection cell tip mating projection tip cell pole plasma membrane bounded cell projection plasma membrane membrane cellular bud neck
A [auth E]	ENTH DOMAIN OF EPSIN ENT1	clathrin binding protein binding binding ubiquitin binding ubiquitin-like protein binding polyubiquitin modification-dependent protein binding modification-dependent protein binding K63-linked polyubiquitin modification-dependent protein binding phospholipid binding lipid binding	actin cortical patch organization actin cytoskeleton organization cortical cytoskeleton organization actin cortical patch assembly cellular component organization cellular component biogenesis organelle organization cellular component assembly cortical actin cytoskeleton organization actin filament-based process cellular process cellular component organization or biogenesis cytoskeleton organization localization actin cortical patch organization actin cytoskeleton organization cortical cytoskeleton organization actin cortical patch assembly cellular component organization cellular component biogenesis organelle organization cellular component assembly cortical actin cytoskeleton organization actin filament-based process cellular process cellular component organization or biogenesis cytoskeleton organization localization import into cell transport endocytosis establishment of localization vesicle-mediated transport actin filament organization supramolecular fiber organization	membrane-bounded organelle intracellular anatomical structure early endosome endosome intracellular vesicle intracellular membrane-bounded organelle endomembrane system intracellular organelle cellular anatomical structure cytoplasmic vesicle organelle cytoplasm vesicle cellular bud membrane-bounded organelle intracellular anatomical structure early endosome endosome intracellular vesicle intracellular membrane-bounded organelle endomembrane system intracellular organelle cellular anatomical structure cytoplasmic vesicle organelle cytoplasm vesicle cellular bud cellular bud tip site of polarized growth cell projection mating projection cell tip mating projection tip cell pole plasma membrane bounded cell projection cell periphery plasma membrane membrane cellular bud neck protein-containing complex vesicle coat membrane protein complex membrane coat bounding membrane of organelle vesicle membrane clathrin-coated vesicle clathrin vesicle coat coated vesicle clathrin-coated vesicle membrane coated membrane clathrin coat coated vesicle membrane cytoplasmic vesicle membrane organelle membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B [auth F]	IPR008942	ENTH/VHS	Homologous Superfamily
B [auth F]	IPR011417	AP180 N-terminal homology (ANTH) domain	Domain
B [auth F]	IPR002558	I/LWEQ domain	Domain
B [auth F]	IPR030224	Sla2 family	Family
B [auth F]	IPR013809	ENTH domain	Domain
B [auth F]	IPR035964	I/LWEQ domain superfamily	Homologous Superfamily
A [auth E]	IPR008942	ENTH/VHS	Homologous Superfamily
A [auth E]	IPR013809	ENTH domain	Domain
A [auth E]	IPR003903	Ubiquitin interacting motif	Conserved Site

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A [auth E], B [auth F]	OPM	Monotopic/peripheral	All alpha monotopic/peripheral	ENTH/VHS domain	ENTH domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

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