4ZXA
Crystal Structure of hydroquinone 1,2-dioxygenase PnpCD in complex with Cd2+ and 4-hydroxybenzonitrile
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | F_UNCLASSIFIED | e4zxaA1 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: F_UNCLASSIFIED | ECOD (1.6) |
B | F_UNCLASSIFIED | e4zxaB1 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: F_UNCLASSIFIED | ECOD (1.6) |
C | F_UNCLASSIFIED | e4zxaC1 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: F_UNCLASSIFIED | ECOD (1.6) |
D | F_UNCLASSIFIED | e4zxaD1 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: F_UNCLASSIFIED | ECOD (1.6) |
E [auth W] | F_UNCLASSIFIED | e4zxaW2 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: F_UNCLASSIFIED | ECOD (1.6) |
E [auth W] | PF18191 | e4zxaW1 | A: a+b two layers | X: ssDNA-binding transcriptional regulator domain-like | H: ssDNA-binding transcriptional regulator domain (From Topology) | T: ssDNA-binding transcriptional regulator domain | F: PF18191 | ECOD (1.6) |
F [auth X] | F_UNCLASSIFIED | e4zxaX1 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: F_UNCLASSIFIED | ECOD (1.6) |
F [auth X] | PF18191 | e4zxaX2 | A: a+b two layers | X: ssDNA-binding transcriptional regulator domain-like | H: ssDNA-binding transcriptional regulator domain (From Topology) | T: ssDNA-binding transcriptional regulator domain | F: PF18191 | ECOD (1.6) |
G [auth Y] | F_UNCLASSIFIED | e4zxaY2 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: F_UNCLASSIFIED | ECOD (1.6) |
G [auth Y] | PF18191 | e4zxaY1 | A: a+b two layers | X: ssDNA-binding transcriptional regulator domain-like | H: ssDNA-binding transcriptional regulator domain (From Topology) | T: ssDNA-binding transcriptional regulator domain | F: PF18191 | ECOD (1.6) |
H [auth Z] | F_UNCLASSIFIED | e4zxaZ2 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: F_UNCLASSIFIED | ECOD (1.6) |
H [auth Z] | PF18191 | e4zxaZ1 | A: a+b two layers | X: ssDNA-binding transcriptional regulator domain-like | H: ssDNA-binding transcriptional regulator domain (From Topology) | T: ssDNA-binding transcriptional regulator domain | F: PF18191 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
E [auth W], F [auth X], G [auth Y], H [auth Z] | PF18191 | Hydroquinone 1,2-dioxygenase large subunit N-terminal (PnpCD_PnpD_N) | Hydroquinone 1,2-dioxygenase large subunit N-terminal | This is the N-terminal domain of the alpha subunit, known as PnpD, of Hydroquinone 1,2-dioxygenase (PnpCD) present in Pseudomonas sp. strain WBC-3. PnpCD is the key enzyme in the degradation pathway of pollutant para-nitrophenol (PNP). The N-terminal ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Hydroquinone dioxygenase small subunit | - | - | ||
E [auth W], F [auth X], G [auth Y], H [auth Z] | Hydroquinone dioxygenase large subunit | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR011051 | RmlC-like cupin domain superfamily | Homologous Superfamily | |
IPR014710 | RmlC-like jelly roll fold | Homologous Superfamily | |
E [auth W], F [auth X], G [auth Y], H [auth Z] | IPR011051 | RmlC-like cupin domain superfamily | Homologous Superfamily |
E [auth W], F [auth X], G [auth Y], H [auth Z] | IPR040908 | Hydroquinone 1,2-dioxygenase large subunit, N-terminal | Domain |
E [auth W], F [auth X], G [auth Y], H [auth Z] | IPR014710 | RmlC-like jelly roll fold | Homologous Superfamily |