4ZTP | pdb_00004ztp

Fab structure of rabbit monoclonal antibody R53 targeting an epitope in HIV-1 gp120 C4 region


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
B [auth H]SSL_OBe4ztpH2 A: a/b three-layered sandwichesX: Sigma2 domain-likeH: Bacterial enterotoxinsT: Bacterial enterotoxinsF: SSL_OBECOD (v294.1)
B [auth H]EF-hand_1, EF-hand_6, EF-hand_7e4ztpH3 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: SAM/DNA-glycosylaseT: SAM domain-likeF: EF-hand_1, EF-hand_6, EF-hand_7ECOD (v294.1)
A [auth L]SSL_OBe4ztpL1 A: a/b three-layered sandwichesX: Sigma2 domain-likeH: Bacterial enterotoxinsT: Bacterial enterotoxinsF: SSL_OBECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B [auth H]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
A [auth L]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
B [auth H]R53 Fab VH-CH1 Oryctolagus cuniculus (rabbit) IGHV1S40*01, IGHJ6*01, IGHG*01, IGHG*05, IGHG*02 V-DOMAIN VH, C-DOMAIN CH1 IG FAB-GAMMA-KAPPA IMGT (202611-0)
A [auth L]R53 Fab L-KAPPA Oryctolagus cuniculus (rabbit) IGKV1S3*01, IGKJ1-2*02, IGKJ1-2*01, IGKC1*01 V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA IG FAB-GAMMA-KAPPA IMGT (202611-0)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
B [auth H]Heavy ChainIGHV1 --SAbDab (2026-03-27)
A [auth L]Light ChainIGKV1 Kappa-SAbDab (2026-03-27)