4ZJH

Crystal structure of native alpha-2-macroglobulin from Escherichia coli spanning domains NIE-MG1.


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF11974e4zjhA2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF11974ECOD (1.6)
APF21142e4zjhA1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF21142ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF17970Bacterial Alpha-2-macroglobulin MG1 domain (bMG1)Bacterial Alpha-2-macroglobulin MG1 domainAlpha-2-macroglobulins (A2Ms) are plasma proteins that trap and inhibit a broad range of proteases and are major components of the eukaryotic innate immune system. However, A2M-like proteins were identified in pathogenically invasive bacteria and spe ...Alpha-2-macroglobulins (A2Ms) are plasma proteins that trap and inhibit a broad range of proteases and are major components of the eukaryotic innate immune system. However, A2M-like proteins were identified in pathogenically invasive bacteria and species that colonize higher eukaryotes. Bacterial A2Ms are located in the periplasm where they are believed to provide protection to the cell by trapping external proteases through a covalent interaction with an activated thioester. This domain is found on the N-terminal region in A2Ms in bacteria. Structure analysis of Salmonella enterica ser A2Ms (SA-A2Ms) show that they are composed of 13 domains, all of which fold as variants of beta sandwiches with the exception of the TED, which consists of 14 alpha helices. Most of the beta sandwich domains appear to serve a structural role and are referred to as the macroglobulin-like (MG) domains. This is the MG1 domain which is the farthest from the body of the structure. It is normally anchored to the inner membrane in vivo and connected to MG2 by a flexible linker [1].
Domain
PF21142Bacterial alpha-2 macroglobulin MG2 domain (A2M_bMG2)Bacterial alpha-2 macroglobulin MG2 domainBacterial alpha-2 macroglobulin (A2M) are located in the periplasm and may protect the cell by trapping external proteases through a covalent interaction with an activated thioester [1,2]. Macroglobulin (MG) beta sandwich domains appear to play a str ...Bacterial alpha-2 macroglobulin (A2M) are located in the periplasm and may protect the cell by trapping external proteases through a covalent interaction with an activated thioester [1,2]. Macroglobulin (MG) beta sandwich domains appear to play a structural role. This entry represents bacterial MG2 (bMG2) domain which, with MG1, plays the role of a linker associating the main body of A2M to the bilayer [1-3].
Domain
PF11974Bacterial alpha-2-macroglobulin MG3 domain (bMG3)Bacterial alpha-2-macroglobulin MG3 domainThis is the MG3 domain from bacterial alpha2-macroglobulins [1].Domain