4Z80 | pdb_00004z80

Crystal structure of Toxoplasma gondii AMA4 DI-DII-EGF1 in complex with a 33 aa TgRON2L1 peptide

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C [auth B]	AMA-1_1st	e4z80B1	A: few secondary structure elements	X: Hairpin loop containing domain-like (From Topology)	H: Hairpin loop containing domain-like (From Topology)	T: Hairpin loop containing domain-like	F: AMA-1_1st	ECOD (1.6)
C [auth B]	AMA-1_2nd	e4z80B2	A: few secondary structure elements	X: Hairpin loop containing domain-like (From Topology)	H: Hairpin loop containing domain-like (From Topology)	T: Hairpin loop containing domain-like	F: AMA-1_2nd	ECOD (1.6)
A	AMA-1_1st	e4z80A1	A: few secondary structure elements	X: Hairpin loop containing domain-like (From Topology)	H: Hairpin loop containing domain-like (From Topology)	T: Hairpin loop containing domain-like	F: AMA-1_1st	ECOD (1.6)
A	AMA-1_2nd	e4z80A2	A: few secondary structure elements	X: Hairpin loop containing domain-like (From Topology)	H: Hairpin loop containing domain-like (From Topology)	T: Hairpin loop containing domain-like	F: AMA-1_2nd	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
C [auth B]	3.50.4.10	Alpha Beta	3-Layer(bba) Sandwich	Hepatocyte Growth Factor	Hepatocyte Growth Factor	CATH (utative)
A	3.50.4.10	Alpha Beta	3-Layer(bba) Sandwich	Hepatocyte Growth Factor	Hepatocyte Growth Factor	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, C [auth B]	PF02430	Apical membrane antigen 1 (AMA-1)	Apical membrane antigen 1	-	Family
A, C [auth B]	PF07974	EGF-like domain (EGF_2)	EGF-like domain	This family contains EGF domains found in a variety of extracellular proteins.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B [auth C], D	Cytoadherence-linked asexual protein	-	biological process involved in interspecies interaction between organisms adhesion of symbiont to host cell adhesion of symbiont to host adhesion of symbiont to microvasculature biological process involved in interaction with host biological process involved in symbiotic interaction	-
A, C [auth B]	EGF family domain-containing protein	-	-	cellular anatomical structure membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B [auth C], D	IPR018378	C-type lectin, conserved site	Conserved Site
B [auth C], D	IPR005553	Cytoadherence-linked asexual protein	Family
A, C [auth B]	IPR003298	Apical membrane antigen 1	Family
A, C [auth B]	IPR051830	Neurogenic locus notch homolog	Family
A, C [auth B]	IPR013032	EGF-like, conserved site	Conserved Site
A, C [auth B]	IPR000742	EGF-like domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.