4Z7L | pdb_00004z7l

Crystal structure of Cas6b

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
F [auth H]	SCOP2B Superfamily	CRISPR-associated proteins	8103618	3001554	SCOP2B (2022-06-29)
E	SCOP2 Family	Cas6b C-terminal domain-like	8046733	4005269	SCOP2 (2022-06-29)
E	SCOP2 Superfamily	CRISPR-associated proteins	8103618	3001554	SCOP2 (2022-06-29)
D [auth G]	SCOP2B Superfamily	CRISPR-associated proteins	8103618	3001554	SCOP2B (2022-06-29)
C [auth D]	SCOP2B Superfamily	CRISPR-associated proteins	8103618	3001554	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	CRISPR-associated proteins	8103618	3001554	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	CRISPR-associated proteins	8103618	3001554	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
F [auth H]	DUF5328	e4z7lH2	A: a+b two layers	X: Alpha-beta plaits	H: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology)	T: CRISPR transcript (pre-crRNA) processing endoribonuclease-related	F: DUF5328	ECOD (1.6)
F [auth H]	cysG_Nterm_like	e4z7lH1	A: a+b two layers	X: Alpha-beta plaits	H: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology)	T: CRISPR transcript (pre-crRNA) processing endoribonuclease-related	F: cysG_Nterm_like	ECOD (1.6)
E	DUF5328	e4z7lE1	A: a+b two layers	X: Alpha-beta plaits	H: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology)	T: CRISPR transcript (pre-crRNA) processing endoribonuclease-related	F: DUF5328	ECOD (1.6)
E	cysG_Nterm_like	e4z7lE2	A: a+b two layers	X: Alpha-beta plaits	H: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology)	T: CRISPR transcript (pre-crRNA) processing endoribonuclease-related	F: cysG_Nterm_like	ECOD (1.6)
D [auth G]	DUF5328	e4z7lG2	A: a+b two layers	X: Alpha-beta plaits	H: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology)	T: CRISPR transcript (pre-crRNA) processing endoribonuclease-related	F: DUF5328	ECOD (1.6)
D [auth G]	EUF08363	e4z7lG1	A: a+b two layers	X: Alpha-beta plaits	H: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology)	T: CRISPR transcript (pre-crRNA) processing endoribonuclease-related	F: EUF08363	ECOD (1.6)
C [auth D]	DUF5328	e4z7lD1	A: a+b two layers	X: Alpha-beta plaits	H: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology)	T: CRISPR transcript (pre-crRNA) processing endoribonuclease-related	F: DUF5328	ECOD (1.6)
C [auth D]	EUF08363	e4z7lD2	A: a+b two layers	X: Alpha-beta plaits	H: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology)	T: CRISPR transcript (pre-crRNA) processing endoribonuclease-related	F: EUF08363	ECOD (1.6)
B	DUF5328	e4z7lB1	A: a+b two layers	X: Alpha-beta plaits	H: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology)	T: CRISPR transcript (pre-crRNA) processing endoribonuclease-related	F: DUF5328	ECOD (1.6)
B	EUF08363	e4z7lB2	A: a+b two layers	X: Alpha-beta plaits	H: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology)	T: CRISPR transcript (pre-crRNA) processing endoribonuclease-related	F: EUF08363	ECOD (1.6)
A	DUF5328	e4z7lA1	A: a+b two layers	X: Alpha-beta plaits	H: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology)	T: CRISPR transcript (pre-crRNA) processing endoribonuclease-related	F: DUF5328	ECOD (1.6)
A	EUF08363	e4z7lA2	A: a+b two layers	X: Alpha-beta plaits	H: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology)	T: CRISPR transcript (pre-crRNA) processing endoribonuclease-related	F: EUF08363	ECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
G [auth C], H [auth F], I	RNA (5'-R(GPCPAPAPAPAPUPAPAPCPAPAPGPC)-3')	-	-	-
A, B, C [auth D], D [auth G], E, A, B, C [auth D], D [auth G], E, F [auth H]	Cas6b	identical protein binding protein binding binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C [auth D], D [auth G], E, A, B, C [auth D], D [auth G], E, F [auth H]	IPR020209	Cas6b, C-terminal domain	Domain
A, B, C [auth D], D [auth G], E, A, B, C [auth D], D [auth G], E, F [auth H]	IPR041528	Cas6b N-terminal	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.