Crystal structure of apo-form of aldehyde deformylating oxygenase from Synechocystis sp.PCC 6803


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad4z5sa_ All alpha proteins Ferritin-like Ferritin-like PMT1231-like automated matches (Synechocystis sp. PCC 6803 substr. Kazusa ) [TaxId: 1111708 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyPMT1231-like 8086807 4001284 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyFerritin-like 8086808 3001658 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ABAHe4z5sA1 A: a/b three-layered sandwichesX: Alpha-beta plaitsH: SH3T: SH3F: BAHECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF11266Long-chain fatty aldehyde decarbonylase (Ald_deCOase)Long-chain fatty aldehyde decarbonylaseThis cyanobacterial family of fatty aldehyde decarbonylases acts on mainly C16 and C18 substrates to form hydrocarbons and carbon monoxide [1]. Note that the corresponding EC number (EC:4.1.99.5) dating from 1989 refers to a nonorthologous Pisum sati ...This cyanobacterial family of fatty aldehyde decarbonylases acts on mainly C16 and C18 substrates to form hydrocarbons and carbon monoxide [1]. Note that the corresponding EC number (EC:4.1.99.5) dating from 1989 refers to a nonorthologous Pisum sativum enzyme that acts on C18 and longer chains and attaches the overly narrow narrow name octadecanal decarbonylase.
Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR022612Long-chain fatty aldehyde decarbonylaseFamily
IPR012347Ferritin-likeHomologous Superfamily
IPR009078Ferritin-like superfamilyHomologous Superfamily