Annotations: 4YN0

Crystal structure of APP E2 domain in complex with DR6 CRD domain

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d4yn0b_	All alpha proteins	STAT-like	CAPPD, an extracellular domain of amyloid beta A4 protein	automated matches	automated matches	Mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	PDCD9	e4yn0B1	A: alpha arrays	X: Alpha-lytic protease prodomain-like	H: KH-domains	T: Prokaryotic type KH domain (KH-domain type II)	F: PDCD9	ECOD (v295)
A	HypA	e4yn0A1	A: alpha arrays	X: Lipocalins/Streptavidin	H: Fibronectin type I module-like	T: Fibronectin type I module	F: HypA	ECOD (v295)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	1.20.120.770	Mainly Alpha	Up-down Bundle	Four Helix Bundle (Hemerythrin (Met), subunit A)	Amyloid precursor protein, E2 domain	CATH (4.3.0)
A	2.10.50.10	Mainly Beta	Ribbon	Tumor Necrosis Factor Receptor, subunit A	domain 2	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00020	TNFR/NGFR cysteine-rich region (TNFR_c6)	TNFR/NGFR cysteine-rich region		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B	Amyloid beta A4 protein	protein binding binding protein-folding chaperone binding enzyme regulator activity enzyme activator activity peptidase regulator activity molecular function activator activity molecular function regulator activity peptidase activator activity protein domain specific binding signaling receptor binding kinase binding enzyme binding protein kinase binding protein binding binding protein-folding chaperone binding enzyme regulator activity enzyme activator activity peptidase regulator activity molecular function activator activity molecular function regulator activity peptidase activator activity protein domain specific binding signaling receptor binding kinase binding enzyme binding protein kinase binding G protein-coupled receptor binding identical protein binding apolipoprotein binding cell adhesion molecule binding protein-containing complex binding integrin binding RAGE receptor binding cation binding transition metal ion binding zinc ion binding ion binding metal ion binding small molecule binding frizzled binding ephrin receptor binding growth factor receptor binding protein homodimerization activity protein dimerization activity PTB domain binding insulin receptor binding heparan sulfate proteoglycan binding proteoglycan binding carbohydrate derivative binding signaling receptor regulator activity receptor ligand activity signaling receptor activator activity DNA binding sequence-specific DNA binding double-stranded DNA binding nucleic acid binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding transcription regulatory region nucleic acid binding RNA polymerase II cis-regulatory region sequence-specific DNA binding chromatin binding protein heterodimerization activity molecular function inhibitor activity serine-type endopeptidase inhibitor activity enzyme inhibitor activity peptidase inhibitor activity endopeptidase regulator activity endopeptidase inhibitor activity acetylcholine receptor binding protein serine/threonine kinase binding chemoattractant activity heparin binding glycosaminoglycan binding sulfur compound binding	negative regulation of long-term synaptic potentiation positive regulation of cell communication regulation of cellular process modulation of chemical synaptic transmission signaling positive regulation of biological process negative regulation of biological process cell communication long-term synaptic potentiation synaptic signaling regulation of biological quality positive regulation of cellular process regulation of synaptic plasticity trans-synaptic signaling negative regulation of long-term synaptic potentiation positive regulation of cell communication regulation of cellular process modulation of chemical synaptic transmission signaling positive regulation of biological process negative regulation of biological process cell communication long-term synaptic potentiation synaptic signaling regulation of biological quality positive regulation of cellular process regulation of synaptic plasticity trans-synaptic signaling regulation of biological process regulation of signaling biological regulation cell-cell signaling positive regulation of synaptic transmission chemical synaptic transmission regulation of trans-synaptic signaling anterograde trans-synaptic signaling regulation of long-term synaptic potentiation regulation of cell communication cellular process positive regulation of signaling regulation of biosynthetic process regulation of nitric oxide biosynthetic process reactive nitrogen species metabolic process nitric oxide metabolic process positive regulation of metabolic process nitric oxide biosynthetic process biosynthetic process positive regulation of biosynthetic process metabolic process regulation of nitric oxide metabolic process positive regulation of nitric oxide biosynthetic process regulation of metabolic process regulation of synapse structure or activity cellular response to stimulus multicellular organismal process regulation of postsynaptic membrane potential system process response to stimulus regulation of system process regulation of signal transduction chemical synaptic transmission, postsynaptic modulation of excitatory postsynaptic potential regulation of multicellular organismal process signal transduction cell surface receptor signaling pathway nervous system process regulation of nervous system process regulation of response to stimulus excitatory postsynaptic potential regulation of membrane potential reactive oxygen species metabolic process regulation of superoxide metabolic process positive regulation of reactive oxygen species metabolic process superoxide metabolic process superoxide anion generation positive regulation of superoxide anion generation regulation of superoxide anion generation regulation of reactive oxygen species metabolic process positive regulation of signal transduction intracellular signal transduction positive regulation of response to stimulus regulation of intracellular signal transduction intracellular signaling cassette regulation of calcium-mediated signaling positive regulation of calcium-mediated signaling positive regulation of intracellular signal transduction calcium-mediated signaling cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein trimerization protein complex oligomerization protein-containing complex assembly cellular component organization or biogenesis biological process involved in interspecies interaction between organisms response to other organism response to yeast response to external stimulus response to fungus response to external biotic stimulus response to biotic stimulus positive regulation of macromolecule biosynthetic process regulation of cytokine production cytokine production positive regulation of macromolecule metabolic process regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process regulation of chemokine production regulation of gene expression positive regulation of gene expression chemokine production positive regulation of chemokine production positive regulation of multicellular organismal process regulation of macromolecule biosynthetic process macromolecule metabolic process positive regulation of cytokine production behavior suckling behavior feeding behavior cellular developmental process astrocyte differentiation cell development astrocyte activation glial cell development multicellular organism development neurogenesis astrocyte development gliogenesis cell differentiation response to stress anatomical structure development system development developmental process defense response cell activation nervous system development central nervous system development glial cell differentiation glial cell activation inflammatory response animal gross anatomical part developmental process neuroinflammatory response defense response to Gram-negative bacterium defense response to bacterium response to bacterium Notch signaling pathway negative regulation of signaling negative regulation of synaptic transmission negative regulation of cell communication positive regulation of long-term synaptic depression negative regulation of cellular process long-term synaptic depression regulation of long-term synaptic depression regulation of endothelin production positive regulation of endothelin production endothelin production neuron recognition axonogenesis cell projection organization plasma membrane bounded cell projection morphogenesis neuron projection development axon choice point recognition cell morphogenesis cell projection morphogenesis neuron differentiation neuron projection morphogenesis cell recognition plasma membrane bounded cell projection organization axon midline choice point recognition axon guidance axon development cell morphogenesis involved in neuron differentiation generation of neurons anatomical structure morphogenesis neuron projection guidance neuron development regulation of cellular component organization positive regulation of cellular component organization positive regulation of amyloid fibril formation positive regulation of protein metabolic process regulation of amyloid fibril formation amyloid fibril formation regulation of primary metabolic process protein metabolic process regulation of protein metabolic process primary metabolic process positive regulation of supramolecular fiber organization regulation of supramolecular fiber organization supramolecular fiber organization lipoprotein particle mediated signaling response to endogenous stimulus response to lipoprotein particle cellular response to low-density lipoprotein particle stimulus response to chemical low-density lipoprotein particle mediated signaling cellular response to lipoprotein particle stimulus cellular localization transport intracellular transport establishment of localization localization axo-dendritic transport establishment of localization in cell microtubule-based transport transport along microtubule cytoskeleton-dependent intracellular transport microtubule-based movement microtubule-based process regulation of programmed cell death extrinsic apoptotic signaling pathway positive regulation of apoptotic signaling pathway positive regulation of programmed cell death regulation of apoptotic process positive regulation of extrinsic apoptotic signaling pathway cell death positive regulation of apoptotic process regulation of extrinsic apoptotic signaling pathway apoptotic signaling pathway apoptotic process programmed cell death regulation of apoptotic signaling pathway neuromuscular process neuromuscular process controlling balance cell junction organization synapse organization adenylate cyclase-activating G protein-coupled receptor signaling pathway adenylate cyclase-modulating G protein-coupled receptor signaling pathway G protein-coupled receptor signaling pathway negative regulation of miRNA transcription RNA metabolic process negative regulation of RNA biosynthetic process nucleobase-containing compound metabolic process RNA biosynthetic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process miRNA transcription regulation of miRNA metabolic process negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process miRNA metabolic process negative regulation of macromolecule metabolic process regulation of RNA biosynthetic process negative regulation of DNA-templated transcription negative regulation of metabolic process nucleobase-containing compound biosynthetic process nucleic acid metabolic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process negative regulation of miRNA metabolic process regulation of DNA-templated transcription negative regulation of RNA metabolic process regulation of miRNA transcription head development forebrain development animal organ development brain development humoral immune response immune response defense response to symbiont antimicrobial humoral response antimicrobial humoral immune response mediated by antimicrobial peptide defense response to other organism immune system process ligand-gated ion channel signaling pathway ionotropic glutamate receptor signaling pathway glutamate receptor signaling pathway regulation of non-canonical NF-kappaB signal transduction non-canonical NF-kappaB signal transduction positive regulation of non-canonical NF-kappaB signal transduction regulation of developmental process regulation of presynapse assembly regulation of nervous system development regulation of presynapse organization negative regulation of cell junction assembly cell junction assembly negative regulation of nervous system development regulation of synapse assembly regulation of multicellular organismal development negative regulation of cellular component organization negative regulation of developmental process presynapse organization negative regulation of synapse organization regulation of cellular component biogenesis regulation of cell junction assembly regulation of synapse organization negative regulation of presynapse assembly synapse assembly negative regulation of multicellular organismal process negative regulation of synapse assembly presynapse assembly learning learning or memory cognition associative learning cell activation involved in immune response astrocyte activation involved in immune response immune effector process regulation of localization regulation of protein localization regulation of protein localization to nucleus protein localization to nucleus negative regulation of protein localization to nucleus macromolecule localization protein localization to organelle intracellular protein localization negative regulation of protein localization positive regulation of cAMP/PKA signal transduction cAMP/PKA signal transduction regulation of cAMP/PKA signal transduction regulation of tumor necrosis factor production positive regulation of tumor necrosis factor superfamily cytokine production tumor necrosis factor superfamily cytokine production positive regulation of tumor necrosis factor production tumor necrosis factor production regulation of tumor necrosis factor superfamily cytokine production response to oxidative stress protein homooligomerization positive regulation of synaptic transmission, cholinergic synaptic transmission, cholinergic regulation of synaptic transmission, cholinergic cellular response to nitrogen compound response to oxygen-containing compound response to nitrogen compound cellular response to amyloid-beta cellular response to oxygen-containing compound cellular response to chemical stimulus response to amyloid-beta regulation of type II interferon production type II interferon production positive regulation of type II interferon production regulation of cell differentiation negative regulation of cell differentiation negative regulation of neuron differentiation regulation of neuron differentiation neuron apoptotic process regulation of cellular response to stress regulation of response to endoplasmic reticulum stress intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress regulation of intrinsic apoptotic signaling pathway regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway cellular response to stress regulation of response to stress regulation of endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway intrinsic apoptotic signaling pathway response to endoplasmic reticulum stress neuron intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress regulation of neuron apoptotic process positive regulation of G protein-coupled receptor signaling pathway regulation of G protein-coupled receptor signaling pathway inorganic ion homeostasis homeostatic process intracellular copper ion homeostasis copper ion homeostasis cellular homeostasis chemical homeostasis intracellular monoatomic cation homeostasis monoatomic ion homeostasis intracellular chemical homeostasis monoatomic cation homeostasis intracellular monoatomic ion homeostasis protein tetramerization interleukin-1 production regulation of interleukin-1 beta production positive regulation of interleukin-1 beta production positive regulation of interleukin-1 production regulation of interleukin-1 production interleukin-1 beta production regulation of Toll signaling pathway positive regulation of Toll signaling pathway Toll signaling pathway regulation of neuronal synaptic plasticity regulation of long-term neuronal synaptic plasticity positive regulation of JNK cascade JNK cascade positive regulation of MAPK cascade regulation of JNK cascade regulation of MAPK cascade MAPK cascade positive regulation of response to endoplasmic reticulum stress positive regulation of monocyte chemotaxis positive regulation of locomotion regulation of cell motility regulation of response to external stimulus positive regulation of chemotaxis positive regulation of cell migration regulation of monocyte chemotaxis positive regulation of response to external stimulus taxis positive regulation of cell motility regulation of cell migration myeloid leukocyte migration positive regulation of mononuclear cell migration cell migration regulation of immune system process cell motility regulation of mononuclear cell migration positive regulation of immune system process locomotion cell chemotaxis chemotaxis regulation of leukocyte chemotaxis regulation of leukocyte migration positive regulation of leukocyte migration positive regulation of leukocyte chemotaxis regulation of chemotaxis monocyte chemotaxis leukocyte migration regulation of locomotion mononuclear cell migration leukocyte chemotaxis regulation of lymphocyte migration positive regulation of lymphocyte migration positive regulation of T cell migration lymphocyte migration regulation of T cell migration T cell migration catabolic process positive regulation of membrane protein ectodomain proteolysis macromolecule catabolic process regulation of proteolysis proteolysis membrane protein proteolysis membrane protein ectodomain proteolysis regulation of membrane protein ectodomain proteolysis protein catabolic process regulation of catabolic process positive regulation of protein catabolic process positive regulation of catabolic process positive regulation of proteolysis regulation of protein catabolic process locomotory behavior response to norepinephrine response to monoamine cellular response to norepinephrine stimulus cellular response to monoamine stimulus response to catecholamine cellular response to catecholamine stimulus adult locomotory behavior adult behavior cytosolic mRNA polyadenylation mRNA metabolic process developmental growth growth neuromuscular junction development synaptic assembly at neuromuscular junction negative regulation of blood circulation circulatory system process regulation of blood circulation blood circulation amyloid precursor protein catabolic process regulation of amyloid precursor protein catabolic process positive regulation of amyloid precursor protein catabolic process amyloid precursor protein metabolic process positive regulation of excitatory postsynaptic potential import into cell regulation of transport regulation of neurotransmitter transport neurotransmitter transport neurotransmitter uptake regulation of neurotransmitter uptake extracellular matrix organization extracellular structure organization external encapsulating structure organization antibacterial humoral response memory positive regulation of response to biotic stimulus pattern recognition receptor signaling pathway toll-like receptor signaling pathway immune response-activating signaling pathway positive regulation of immune response innate immune response-activating signaling pathway regulation of innate immune response regulation of pattern recognition receptor signaling pathway positive regulation of defense response activation of innate immune response regulation of immune response regulation of toll-like receptor signaling pathway activation of immune response regulation of defense response regulation of response to biotic stimulus immune response-regulating signaling pathway innate immune response positive regulation of innate immune response regulation of multicellular organism growth regulation of growth regulation of developmental growth multicellular organism growth cell growth collateral sprouting in absence of injury collateral sprouting developmental cell growth developmental growth involved in morphogenesis negative adaptation of signaling pathway regulation of G protein-coupled receptor internalization receptor internalization regulation of receptor internalization vesicle-mediated transport negative regulation of G protein-coupled receptor signaling pathway positive regulation of endocytosis positive regulation of receptor-mediated endocytosis positive regulation of G protein-coupled receptor internalization positive regulation of receptor internalization adaptation of signaling pathway receptor-mediated endocytosis desensitization of G protein-coupled receptor signaling pathway regulation of endocytosis G protein-coupled receptor internalization negative regulation of response to stimulus regulation of receptor-mediated endocytosis regulation of vesicle-mediated transport negative regulation of signal transduction positive regulation of transport endocytosis protein import establishment of protein localization regulation of establishment of protein localization positive regulation of establishment of protein localization regulation of protein transport positive regulation of protein import positive regulation of protein transport regulation of protein import protein transport positive regulation of protein localization protein phosphorylation phosphorylation macromolecule modification phosphate-containing compound metabolic process protein modification process regulation of amyloid-beta clearance amyloid-beta clearance transcription by RNA polymerase II regulation of transcription by RNA polymerase II negative regulation of transcription by RNA polymerase II myeloid leukocyte activation leukocyte activation macrophage activation leukocyte activation involved in inflammatory response microglial cell activation defense response to fungus antifungal humoral response negative regulation of Wnt signaling pathway Wnt signaling pathway regulation of Wnt signaling pathway ribonucleotide catabolic process pyridine nucleotide catabolic process aerobic respiration oxoacid metabolic process carbohydrate catabolic process carbohydrate derivative metabolic process organophosphate catabolic process regulation of generation of precursor metabolites and energy nucleoside phosphate catabolic process regulation of ATP metabolic process regulation of purine nucleotide catabolic process positive regulation of nucleotide catabolic process regulation of small molecule metabolic process glycolytic process regulation of nucleotide metabolic process pyridine-containing compound metabolic process small molecule metabolic process purine ribonucleotide catabolic process phosphorus metabolic process nucleoside phosphate metabolic process nicotinamide nucleotide metabolic process pyruvate metabolic process regulation of carbohydrate catabolic process positive regulation of phosphorus metabolic process purine nucleoside diphosphate metabolic process purine-containing compound catabolic process nucleotide metabolic process regulation of purine nucleotide metabolic process nucleobase-containing compound catabolic process positive regulation of ATP metabolic process nucleoside diphosphate metabolic process purine nucleoside diphosphate catabolic process nucleoside diphosphate catabolic process regulation of phosphorus metabolic process regulation of nucleotide catabolic process positive regulation of carbohydrate metabolic process nucleoside triphosphate metabolic process monocarboxylic acid metabolic process purine ribonucleotide metabolic process pyridine-containing compound catabolic process ribose phosphate metabolic process cellular respiration ATP metabolic process energy derivation by oxidation of organic compounds positive regulation of nucleotide metabolic process positive regulation of purine nucleotide catabolic process purine nucleotide metabolic process ribonucleotide metabolic process nucleobase-containing small molecule metabolic process purine ribonucleoside triphosphate metabolic process ribonucleoside diphosphate metabolic process ribonucleoside diphosphate catabolic process regulation of carbohydrate metabolic process nucleotide catabolic process purine nucleoside triphosphate metabolic process carbohydrate metabolic process purine nucleotide catabolic process carbohydrate derivative catabolic process positive regulation of glycolytic process ADP catabolic process carboxylic acid metabolic process generation of precursor metabolites and energy regulation of glycolytic process purine-containing compound metabolic process positive regulation of purine nucleotide metabolic process ADP metabolic process organophosphate metabolic process purine ribonucleoside diphosphate metabolic process positive regulation of small molecule metabolic process purine ribonucleoside diphosphate catabolic process myeloid leukocyte differentiation mononuclear cell differentiation microglia differentiation hemopoiesis macrophage differentiation microglia development myeloid cell differentiation myeloid cell development leukocyte differentiation hippocampal neuron apoptotic process positive regulation of ERK1 and ERK2 cascade ERK1 and ERK2 cascade regulation of ERK1 and ERK2 cascade positive regulation of long-term synaptic potentiation dendritic spine maintenance cellular component maintenance regulation of dendritic spine maintenance dendritic spine organization postsynapse organization regulation of cell projection organization regulation of postsynapse organization neuron projection organization regulation of plasma membrane bounded cell projection organization secondary alcohol metabolic process sterol metabolic process steroid metabolic process cholesterol metabolic process alcohol metabolic process lipid metabolic process adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway monoatomic ion transport monoatomic cation transport calcium ion transport metal ion transport positive regulation of gene expression, epigenetic chromatin organization chromatin remodeling epigenetic regulation of gene expression negative regulation of gene expression positive regulation of cell cycle mitotic cell cycle regulation of mitotic cell cycle positive regulation of mitotic cell cycle cell cycle regulation of cell cycle neuron projection maintenance regulation of cell cycle phase transition G2/M transition of mitotic cell cycle cell cycle phase transition positive regulation of mitotic cell cycle phase transition positive regulation of cell cycle process cell cycle process cell cycle G2/M phase transition positive regulation of G2/M transition of mitotic cell cycle regulation of G2/M transition of mitotic cell cycle regulation of cell cycle process regulation of cell cycle G2/M phase transition positive regulation of cell cycle G2/M phase transition regulation of mitotic cell cycle phase transition mitotic cell cycle process positive regulation of cell cycle phase transition mitotic cell cycle phase transition phospholipase D-activating G protein-coupled receptor signaling pathway regulation of inflammatory response positive regulation of inflammatory response developmental maturation neuron remodeling anatomical structure maturation neuron maturation cell maturation reproductive process multicellular organismal reproductive process reproductive behavior mating behavior regulation of canonical Wnt signaling pathway canonical Wnt signaling pathway negative regulation of canonical Wnt signaling pathway positive regulation of neuron apoptotic process translation protein biosynthetic process post-transcriptional regulation of gene expression regulation of translation cell adhesion negative regulation of cell projection organization negative regulation of dendritic spine maintenance positive regulation of DNA-templated transcription positive regulation of transcription by RNA polymerase II positive regulation of RNA metabolic process positive regulation of RNA biosynthetic process interleukin-6 production positive regulation of interleukin-6 production regulation of interleukin-6 production spontaneous synaptic transmission regulation of spontaneous synaptic transmission response to peptide response to cytokine response to interleukin-1 response to light stimulus visual learning visual behavior response to radiation response to abiotic stimulus dendrite development positive regulation of neuron differentiation positive regulation of developmental process positive regulation of cell differentiation response to metal ion response to calcium ion regulation of response to calcium ion negative regulation of cell population proliferation cell population proliferation regulation of cell population proliferation intracellular calcium ion homeostasis smooth endoplasmic reticulum calcium ion homeostasis calcium ion homeostasis endoplasmic reticulum calcium ion homeostasis defense response to Gram-positive bacterium	membrane-bounded organelle intracellular anatomical structure transport vesicle intracellular vesicle intracellular membrane-bounded organelle endomembrane system endosome to plasma membrane transport vesicle intracellular organelle cellular anatomical structure cytoplasmic vesicle organelle secretory vesicle cytoplasm vesicle membrane-bounded organelle intracellular anatomical structure transport vesicle intracellular vesicle intracellular membrane-bounded organelle endomembrane system endosome to plasma membrane transport vesicle intracellular organelle cellular anatomical structure cytoplasmic vesicle organelle secretory vesicle cytoplasm vesicle exocytic vesicle presynapse synapse cell junction presynaptic active zone axon cell leading edge neuron projection growth cone lamellipodium plasma membrane bounded cell projection growth cone cell projection distal axon site of polarized growth lamellipodium protein-containing complex signaling receptor complex neuromuscular junction synaptic vesicle glial cell projection astrocyte projection cell periphery plasma membrane membrane main axon endosome intermediate-density lipoprotein particle extracellular region plasma lipoprotein particle triglyceride-rich plasma lipoprotein particle extracellular protein-containing complex lipoprotein particle protein-lipid complex apical part of cell COPII-coated ER to Golgi transport vesicle coated vesicle somatodendritic compartment dendrite dendritic tree Golgi apparatus mitochondrion very-low-density lipoprotein particle endoplasmic reticulum cell body perikaryon neuronal cell body cell-cell junction anchoring junction high-density lipoprotein particle smooth endoplasmic reticulum recycling endosome ciliary rootlet intracellular membraneless organelle cilium cytoskeleton membraneless organelle cell surface membrane microdomain membrane raft actin cytoskeleton growth cone filopodium actin-based cell projection filopodium low-density lipoprotein particle clathrin-coated pit dense core granule secretory granule neuronal dense core vesicle spindle spindle midzone microtubule cytoskeleton amyloid-beta complex nucleus membrane-enclosed lumen intracellular organelle lumen organelle envelope lumen organelle envelope organelle lumen nuclear envelope lumen nuclear envelope perinuclear region of cytoplasm Golgi-associated vesicle early endosome endosome membrane early endosome membrane cytoplasmic vesicle membrane bounding membrane of organelle vesicle membrane organelle membrane
A	Tumor necrosis factor receptor superfamily member 21	-	response to peptide cellular response to tumor necrosis factor response to stimulus response to chemical response to cytokine cellular response to cytokine stimulus response to tumor necrosis factor negative regulation of lymphocyte proliferation multicellular organismal process regulation of cellular process regulation of leukocyte activation negative regulation of biological process regulation of cell activation lymphocyte activation response to peptide cellular response to tumor necrosis factor response to stimulus response to chemical response to cytokine cellular response to cytokine stimulus response to tumor necrosis factor negative regulation of lymphocyte proliferation multicellular organismal process regulation of cellular process regulation of leukocyte activation negative regulation of biological process regulation of cell activation lymphocyte activation negative regulation of lymphocyte activation leukocyte proliferation leukocyte activation negative regulation of mononuclear cell proliferation negative regulation of leukocyte proliferation regulation of B cell proliferation lymphocyte proliferation regulation of B cell activation negative regulation of cellular process regulation of immune system process regulation of multicellular organismal process negative regulation of B cell activation regulation of lymphocyte proliferation regulation of leukocyte proliferation regulation of biological process negative regulation of cell population proliferation cell population proliferation B cell activation biological regulation cell activation B cell proliferation negative regulation of B cell proliferation negative regulation of cell activation negative regulation of immune system process regulation of cell population proliferation mononuclear cell proliferation immune system process regulation of mononuclear cell proliferation cellular process negative regulation of multicellular organismal process negative regulation of leukocyte activation regulation of lymphocyte activation cellular response to stimulus immune response-regulating cell surface receptor signaling pathway signaling positive regulation of biological process cell communication positive regulation of response to stimulus immune response-activating signaling pathway immune response-regulating signaling pathway positive regulation of immune response signal transduction positive regulation of immune system process cell surface receptor signaling pathway immune response-activating cell surface receptor signaling pathway immune response T cell receptor signaling pathway regulation of response to stimulus regulation of immune response antigen receptor-mediated signaling pathway activation of immune response adaptive immune response neuron apoptotic process apoptotic process cell death programmed cell death humoral immune response lymphocyte apoptotic process leukocyte apoptotic process B cell apoptotic process developmental process cellular developmental process regulation of developmental process regulation of glial cell differentiation regulation of cell differentiation nervous system development multicellular organism development neurogenesis central nervous system development gliogenesis oligodendrocyte differentiation glial cell differentiation cell differentiation anatomical structure development regulation of oligodendrocyte differentiation animal gross anatomical part developmental process system development negative regulation of interleukin-5 production regulation of interleukin-5 production regulation of cytokine production cytokine production interleukin-5 production negative regulation of macromolecule metabolic process regulation of biosynthetic process negative regulation of metabolic process negative regulation of cytokine production regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process regulation of macromolecule biosynthetic process metabolic process macromolecule metabolic process regulation of metabolic process neuron recognition cell projection organization cell development neuron projection development neuron projection fasciculation cellular component organization neuron differentiation axonal fasciculation cell recognition cellular component organization or biogenesis plasma membrane bounded cell projection organization axon development generation of neurons neuron development myelination axon ensheathment ensheathment of neurons negative regulation of T cell proliferation negative regulation of cell adhesion T cell activation negative regulation of T cell activation negative regulation of leukocyte cell-cell adhesion negative regulation of cell-cell adhesion regulation of leukocyte cell-cell adhesion leukocyte cell-cell adhesion cell adhesion cell-cell adhesion regulation of cell-cell adhesion T cell proliferation regulation of cell adhesion regulation of T cell activation regulation of T cell proliferation negative regulation of nervous system process system process regulation of myelination regulation of system process regulation of nervous system development regulation of multicellular organismal development nervous system process regulation of nervous system process negative regulation of myelination interleukin-13 production negative regulation of interleukin-13 production regulation of interleukin-13 production oligodendrocyte apoptotic process glial cell apoptotic process negative regulation of interleukin-10 production interleukin-10 production regulation of interleukin-10 production	cell periphery cellular anatomical structure plasma membrane membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B	IPR024329	Amyloidogenic glycoprotein, E2 domain	Domain
B	IPR036669	Amyloidogenic glycoprotein, copper-binding domain superfamily	Homologous Superfamily
B	IPR019745	Amyloidogenic glycoprotein, intracellular domain, conserved site	Conserved Site
B	IPR020901	Proteinase inhibitor I2, Kunitz, conserved site	Conserved Site
B	IPR002223	Pancreatic trypsin inhibitor Kunitz domain	Domain
B	IPR015849	Amyloidogenic glycoprotein, heparin-binding	Domain
B	IPR011993	PH-like domain superfamily	Homologous Superfamily
B	IPR013803	Amyloidogenic glycoprotein, amyloid-beta peptide	Domain
B	IPR008154	Amyloidogenic glycoprotein, extracellular	Domain
B	IPR036176	E2 domain superfamily	Homologous Superfamily
B	IPR011178	Amyloidogenic glycoprotein, copper-binding	Domain
B	IPR019744	Amyloidogenic glycoprotein, copper-binding domain conserved site	Conserved Site
B	IPR036454	Amyloidogenic glycoprotein, heparin-binding domain superfamily	Homologous Superfamily
B	IPR019543	Beta-amyloid precursor protein C-terminal	Domain
B	IPR036880	Pancreatic trypsin inhibitor Kunitz domain superfamily	Homologous Superfamily
B	IPR008155	Amyloidogenic glycoprotein	Family
A	IPR011029	Death-like domain superfamily	Homologous Superfamily
A	IPR022330	Tumour necrosis factor receptor 21	Family
A	IPR000488	Death domain	Domain
A	IPR001368	TNFR/NGFR cysteine-rich region	Domain
A	IPR034037	Tumor necrosis factor receptor 21, death domain	Domain
A	IPR034034	Tumor necrosis factor receptor 21, N-terminal	Domain