4YF5

Crystal structure of Rv1284 in the presence of polycarpine at acidic pH

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d4yf5a1	Alpha and beta proteins (a/b)	Resolvase-like	beta-carbonic anhydrase, cab	automated matches	automated matches	(Mycobacterium tuberculosis CDC1551 ) [TaxId: 83331 ],	SCOPe (2.08)
A	d4yf5a2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Mycobacterium tuberculosis CDC1551 ) [TaxId: 83331 ],	SCOPe (2.08)
B	d4yf5b1	Alpha and beta proteins (a/b)	Resolvase-like	beta-carbonic anhydrase, cab	automated matches	automated matches	(Mycobacterium tuberculosis CDC1551 ) [TaxId: 83331 ],	SCOPe (2.08)
B	d4yf5b2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Mycobacterium tuberculosis CDC1551 ) [TaxId: 83331 ],	SCOPe (2.08)
C	d4yf5c1	Alpha and beta proteins (a/b)	Resolvase-like	beta-carbonic anhydrase, cab	automated matches	automated matches	(Mycobacterium tuberculosis CDC1551 ) [TaxId: 83331 ],	SCOPe (2.08)
C	d4yf5c2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Mycobacterium tuberculosis CDC1551 ) [TaxId: 83331 ],	SCOPe (2.08)
D	d4yf5d1	Alpha and beta proteins (a/b)	Resolvase-like	beta-carbonic anhydrase, cab	automated matches	automated matches	(Mycobacterium tuberculosis CDC1551 ) [TaxId: 83331 ],	SCOPe (2.08)
D	d4yf5d2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Mycobacterium tuberculosis CDC1551 ) [TaxId: 83331 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	beta-carbonic anhydrase cab	8085532	3000468	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	beta-carbonic anhydrase cab	8085532	3000468	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	beta-carbonic anhydrase cab	8085532	3000468	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	beta-carbonic anhydrase cab	8085532	3000468	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Pro_CA	e4yf5A1	A: a/b three-layered sandwiches	X: beta-carbonic anhydrase-like	H: beta-carbonic anhydrase (From Topology)	T: beta-carbonic anhydrase	F: Pro_CA	ECOD (1.6)
B	Pro_CA	e4yf5B1	A: a/b three-layered sandwiches	X: beta-carbonic anhydrase-like	H: beta-carbonic anhydrase (From Topology)	T: beta-carbonic anhydrase	F: Pro_CA	ECOD (1.6)
C	Pro_CA	e4yf5C1	A: a/b three-layered sandwiches	X: beta-carbonic anhydrase-like	H: beta-carbonic anhydrase (From Topology)	T: beta-carbonic anhydrase	F: Pro_CA	ECOD (1.6)
D	Pro_CA	e4yf5D1	A: a/b three-layered sandwiches	X: beta-carbonic anhydrase-like	H: beta-carbonic anhydrase (From Topology)	T: beta-carbonic anhydrase	F: Pro_CA	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.40.1050.10	Alpha Beta	3-Layer(aba) Sandwich	Beta-carbonic Anhydrase	Chain A	CATH (4.3.0)
B	3.40.1050.10	Alpha Beta	3-Layer(aba) Sandwich	Beta-carbonic Anhydrase	Chain A	CATH (4.3.0)
C	3.40.1050.10	Alpha Beta	3-Layer(aba) Sandwich	Beta-carbonic Anhydrase	Chain A	CATH (4.3.0)
D	3.40.1050.10	Alpha Beta	3-Layer(aba) Sandwich	Beta-carbonic Anhydrase	Chain A	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF00484	Carbonic anhydrase (Pro_CA)	Carbonic anhydrase	This family includes carbonic anhydrases as well as a family of non-functional homologues related to YbcF.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Beta-carbonic anhydrase 1	cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding carbonate dehydratase activity hydro-lyase activity lyase activity catalytic activity carbon-oxygen lyase activity	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR001765	Carbonic anhydrase	Family
A, B, C, D	IPR036874	Carbonic anhydrase superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.