4XBY | pdb_00004xby

Crystal Structure of the L74F/M78V/I80V/L114F mutant of LEH complexed with cyclopentene oxide

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A [auth C]	d4xbyc_	Alpha and beta proteins (a+b)	Cystatin-like	NTF2-like	Limonene-1,2-epoxide hydrolase-like	Limonene-1,2-epoxide hydrolase	(Rhodococcus erythropolis ) [TaxId: 1833 ],	SCOPe (2.08)
B [auth D]	d4xbyd_	Alpha and beta proteins (a+b)	Cystatin-like	NTF2-like	Limonene-1,2-epoxide hydrolase-like	Limonene-1,2-epoxide hydrolase	(Rhodococcus erythropolis ) [TaxId: 1833 ],	SCOPe (2.08)
C [auth A]	d4xbya_	Alpha and beta proteins (a+b)	Cystatin-like	NTF2-like	Limonene-1,2-epoxide hydrolase-like	Limonene-1,2-epoxide hydrolase	(Rhodococcus erythropolis ) [TaxId: 1833 ],	SCOPe (2.08)
D [auth B]	d4xbyb_	Alpha and beta proteins (a+b)	Cystatin-like	NTF2-like	Limonene-1,2-epoxide hydrolase-like	Limonene-1,2-epoxide hydrolase	(Rhodococcus erythropolis ) [TaxId: 1833 ],	SCOPe (2.08)
E	d4xbye_	Alpha and beta proteins (a+b)	Cystatin-like	NTF2-like	Limonene-1,2-epoxide hydrolase-like	Limonene-1,2-epoxide hydrolase	(Rhodococcus erythropolis ) [TaxId: 1833 ],	SCOPe (2.08)
F	d4xbyf_	Alpha and beta proteins (a+b)	Cystatin-like	NTF2-like	Limonene-1,2-epoxide hydrolase-like	Limonene-1,2-epoxide hydrolase	(Rhodococcus erythropolis ) [TaxId: 1833 ],	SCOPe (2.08)
G	d4xbyg_	Alpha and beta proteins (a+b)	Cystatin-like	NTF2-like	Limonene-1,2-epoxide hydrolase-like	Limonene-1,2-epoxide hydrolase	(Rhodococcus erythropolis ) [TaxId: 1833 ],	SCOPe (2.08)
H	d4xbyh_	Alpha and beta proteins (a+b)	Cystatin-like	NTF2-like	Limonene-1,2-epoxide hydrolase-like	Limonene-1,2-epoxide hydrolase	(Rhodococcus erythropolis ) [TaxId: 1833 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A [auth C]	SCOP2B Superfamily	NTF2-like	8033663	3000472	SCOP2B (2022-06-29)
B [auth D]	SCOP2B Superfamily	NTF2-like	8033663	3000472	SCOP2B (2022-06-29)
C [auth A]	SCOP2B Superfamily	NTF2-like	8033663	3000472	SCOP2B (2022-06-29)
D [auth B]	SCOP2B Superfamily	NTF2-like	8033663	3000472	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	NTF2-like	8033663	3000472	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	NTF2-like	8033663	3000472	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	NTF2-like	8033663	3000472	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	NTF2-like	8033663	3000472	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth C]	SnoaL_1	e4xbyC1	A: a+b two layers	X: Cystatin-like	H: NTF2-like (From Topology)	T: NTF2-like	F: SnoaL_1	ECOD (1.6)
B [auth D]	SnoaL_1	e4xbyD1	A: a+b two layers	X: Cystatin-like	H: NTF2-like (From Topology)	T: NTF2-like	F: SnoaL_1	ECOD (1.6)
C [auth A]	SnoaL_1	e4xbyA1	A: a+b two layers	X: Cystatin-like	H: NTF2-like (From Topology)	T: NTF2-like	F: SnoaL_1	ECOD (1.6)
D [auth B]	SnoaL_1	e4xbyB1	A: a+b two layers	X: Cystatin-like	H: NTF2-like (From Topology)	T: NTF2-like	F: SnoaL_1	ECOD (1.6)
E	SnoaL_1	e4xbyE1	A: a+b two layers	X: Cystatin-like	H: NTF2-like (From Topology)	T: NTF2-like	F: SnoaL_1	ECOD (1.6)
F	SnoaL_1	e4xbyF1	A: a+b two layers	X: Cystatin-like	H: NTF2-like (From Topology)	T: NTF2-like	F: SnoaL_1	ECOD (1.6)
G	SnoaL_1	e4xbyG1	A: a+b two layers	X: Cystatin-like	H: NTF2-like (From Topology)	T: NTF2-like	F: SnoaL_1	ECOD (1.6)
H	SnoaL_1	e4xbyH1	A: a+b two layers	X: Cystatin-like	H: NTF2-like (From Topology)	T: NTF2-like	F: SnoaL_1	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A [auth C]	3.10.450.50	Alpha Beta	Roll	Nuclear Transport Factor 2	Chain: A,	CATH (4.3.0)
B [auth D]	3.10.450.50	Alpha Beta	Roll	Nuclear Transport Factor 2	Chain: A,	CATH (4.3.0)
C [auth A]	3.10.450.50	Alpha Beta	Roll	Nuclear Transport Factor 2	Chain: A,	CATH (4.3.0)
D [auth B]	3.10.450.50	Alpha Beta	Roll	Nuclear Transport Factor 2	Chain: A,	CATH (4.3.0)
E	3.10.450.50	Alpha Beta	Roll	Nuclear Transport Factor 2	Chain: A,	CATH (4.3.0)
F	3.10.450.50	Alpha Beta	Roll	Nuclear Transport Factor 2	Chain: A,	CATH (4.3.0)
G	3.10.450.50	Alpha Beta	Roll	Nuclear Transport Factor 2	Chain: A,	CATH (4.3.0)
H	3.10.450.50	Alpha Beta	Roll	Nuclear Transport Factor 2	Chain: A,	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth C], B [auth D], C [auth A], D [auth B], E, A [auth C], B [auth D], C [auth A], D [auth B], E, F, G, H	Limonene-1,2-epoxide hydrolase	epoxide hydrolase activity ether hydrolase activity hydrolase activity, acting on ether bonds hydrolase activity limonene-1,2-epoxide hydrolase activity catalytic activity	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth C], B [auth D], C [auth A], D [auth B], E, A [auth C], B [auth D], C [auth A], D [auth B], E, F, G, H	IPR032710	NTF2-like domain superfamily	Homologous Superfamily
A [auth C], B [auth D], C [auth A], D [auth B], E, A [auth C], B [auth D], C [auth A], D [auth B], E, F, G, H	IPR013100	Limonene-1,2-epoxide hydrolase	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.