4WXY
PLPS (inactive glutaminase mutant) co-crystallized with glutamine and R5P.
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
E [auth I] | SCOP2B Superfamily | Ribulose-phoshate binding barrel | 8036029 | 3000216 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Ribulose-phoshate binding barrel | 8036029 | 3000216 | SCOP2B (2022-06-29) |
B [auth C] | SCOP2B Superfamily | Ribulose-phoshate binding barrel | 8036029 | 3000216 | SCOP2B (2022-06-29) |
C [auth E] | SCOP2B Superfamily | Ribulose-phoshate binding barrel | 8036029 | 3000216 | SCOP2B (2022-06-29) |
D [auth G] | SCOP2B Superfamily | Ribulose-phoshate binding barrel | 8036029 | 3000216 | SCOP2B (2022-06-29) |
F [auth K] | SCOP2B Superfamily | Ribulose-phoshate binding barrel | 8036029 | 3000216 | SCOP2B (2022-06-29) |
J [auth H] | SCOP2B Superfamily | Class I glutamine amidotransferase-like | 8080556 | 3001405 | SCOP2B (2022-06-29) |
G [auth B] | SCOP2B Superfamily | Class I glutamine amidotransferase-like | 8080556 | 3001405 | SCOP2B (2022-06-29) |
H [auth D] | SCOP2B Superfamily | Class I glutamine amidotransferase-like | 8080556 | 3001405 | SCOP2B (2022-06-29) |
I [auth F] | SCOP2 Family | Class I glutamine amidotransferases (GAT) | 8080555 | 4003747 | SCOP2 (2022-06-29) |
I [auth F] | SCOP2 Superfamily | Class I glutamine amidotransferase-like | 8080556 | 3001405 | SCOP2 (2022-06-29) |
K [auth J] | SCOP2B Superfamily | Class I glutamine amidotransferase-like | 8080556 | 3001405 | SCOP2B (2022-06-29) |
L | SCOP2B Superfamily | Class I glutamine amidotransferase-like | 8080556 | 3001405 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
E [auth I] | PF01680 | e4wxyI1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01680 | ECOD (1.6) |
A | PF01680 | e4wxyA1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01680 | ECOD (1.6) |
B [auth C] | PF01680 | e4wxyC1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01680 | ECOD (1.6) |
C [auth E] | PF01680 | e4wxyE1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01680 | ECOD (1.6) |
D [auth G] | PF01680 | e4wxyG1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01680 | ECOD (1.6) |
F [auth K] | PF01680 | e4wxyK1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01680 | ECOD (1.6) |
J [auth H] | PF01174 | e4wxyH1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Class I glutamine amidotransferase-like | F: PF01174 | ECOD (1.6) |
G [auth B] | PF01174 | e4wxyB1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Class I glutamine amidotransferase-like | F: PF01174 | ECOD (1.6) |
H [auth D] | PF01174 | e4wxyD1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Class I glutamine amidotransferase-like | F: PF01174 | ECOD (1.6) |
I [auth F] | PF01174 | e4wxyF1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Class I glutamine amidotransferase-like | F: PF01174 | ECOD (1.6) |
K [auth J] | PF01174 | e4wxyJ1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Class I glutamine amidotransferase-like | F: PF01174 | ECOD (1.6) |
L | PF01174 | e4wxyL1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Class I glutamine amidotransferase-like | F: PF01174 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01680 | SOR/SNZ family (SOR_SNZ) | SOR/SNZ family | Members of this family are enzymes involved in a new pathway of pyridoxine/pyridoxal 5-phosphate biosynthesis [1]. This family was formerly known as UPF0019. | Domain | |
PF00117 | Glutamine amidotransferase class-I (GATase) | Glutamine amidotransferase class-I | - | Domain | |
PF01174 | SNO glutamine amidotransferase family (SNO) | SNO glutamine amidotransferase family | This family and its amidotransferase domain was first described in [1]. It is predicted that members of this family are involved in the pyridoxine biosynthetic pathway, based on the proximity and co-regulation of the corresponding genes and physical ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR011060 | Ribulose-phosphate binding barrel | Homologous Superfamily | |
IPR001852 | Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ | Family | |
IPR013785 | Aldolase-type TIM barrel | Homologous Superfamily | |
IPR033755 | PdxS/SNZ N-terminal domain | Domain | |
IPR029062 | Class I glutamine amidotransferase-like | Homologous Superfamily | |
IPR002161 | Pyridoxal 5'-phosphate synthase subunit PdxT/SNO | Family | |
IPR021196 | PdxT/SNO family, conserved site | Conserved Site |