Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
C [auth B]d4wrlb_ All alpha proteins 4-helical cytokines 4-helical cytokines Short-chain cytokines automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Dd4wrld_ All alpha proteins 4-helical cytokines 4-helical cytokines Short-chain cytokines automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
C [auth B]SCOP2B Superfamily4-helical cytokines8037095 3001717 SCOP2B (2022-06-29)
DSCOP2B Superfamily4-helical cytokines8037095 3001717 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AI-set_4e4wrlA2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: I-set_4ECOD (1.6)
AI-set_5e4wrlA1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: I-set_5ECOD (1.6)
B [auth C]I-set_4e4wrlC2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: I-set_4ECOD (1.6)
B [auth C]I-set_5e4wrlC1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: I-set_5ECOD (1.6)
C [auth B]CSF-1e4wrlB1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: 4-helical cytokines (From Topology)T: 4-helical cytokinesF: CSF-1ECOD (1.6)
DCSF-1e4wrlD1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: 4-helical cytokines (From Topology)T: 4-helical cytokinesF: CSF-1ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
B [auth C]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
C [auth B]1.20.1250.10 Mainly Alpha Up-down Bundle Growth Hormone Chain: ACATH (4.3.0)
D1.20.1250.10 Mainly Alpha Up-down Bundle Growth Hormone Chain: ACATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
B [auth C]
PF00047Immunoglobulin domain (ig)Immunoglobulin domainMembers of the immunoglobulin superfamily are found in hundreds of proteins of different functions. Examples include antibodies, the giant muscle kinase titin and receptor tyrosine kinases. Immunoglobulin-like domains may be involved in protein-prot ...Members of the immunoglobulin superfamily are found in hundreds of proteins of different functions. Examples include antibodies, the giant muscle kinase titin and receptor tyrosine kinases. Immunoglobulin-like domains may be involved in protein-protein and protein-ligand interactions.
Domain
C [auth B],
D
PF05337Macrophage colony stimulating factor-1 (CSF-1) (CSF-1)Macrophage colony stimulating factor-1 (CSF-1)Colony stimulating factor 1 (CSF-1) is a homodimeric polypeptide growth factor whose primary function is to regulate the survival, proliferation, differentiation, and function of cells of the mononuclear phagocytic lineage. This lineage includes mono ...Colony stimulating factor 1 (CSF-1) is a homodimeric polypeptide growth factor whose primary function is to regulate the survival, proliferation, differentiation, and function of cells of the mononuclear phagocytic lineage. This lineage includes mononuclear phagocytic precursors, blood monocytes, tissue macrophages, osteoclasts, and microglia of the brain, all of which possess cell surface receptors for CSF-1. The protein has also been linked with male fertility [1] and mutations in the Csf-1 gene have been found to cause osteopetrosis and failure of tooth eruption [2]. Structurally these are short-chain 4-helical cytokines.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
B [auth C]
Macrophage colony-stimulating factor 1 receptor
C [auth B],
D
Macrophage colony-stimulating factor 1

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A,
B [auth C]
PharosP07333
C [auth B],
D
PharosP09603