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 4WH5 | pdb_00004wh5

Crystal structure of lincosamide antibiotic adenylyltransferase LnuA, lincomycin-bound

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyNucleotidyltransferase-like 8090673 3000129 SCOP2B (2022-06-29)
ASCOP2 Family2''-aminoglycoside nucleotidyltransferase-like 8045435 4004470 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyNucleotidyltransferase-like 8090673 3000129 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Be4wh5B1 A: alpha arraysX: omega toxin-likeH: omega toxin-relatedT: omega toxin-relatedF:ECOD (v295.2)
Ae4wh5A1 A: alpha arraysX: omega toxin-likeH: omega toxin-relatedT: omega toxin-relatedF:ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.30.460.40 Alpha Beta 2-Layer Sandwich Beta Polymerase domain 2CATH (4.3.0)
A3.30.460.40 Alpha Beta 2-Layer Sandwich Beta Polymerase domain 2CATH (4.3.0)

AMR Gene: CARD Annotation CARD Database Homepage

ChainsAccessionShort NameDescriptionProvenance Source (Version)
A, B
ARO:3002835lnuAlnuA is a plasmid-mediated nucleotidyltransferase found in Staphylococcus chromogenes.CARD (4.0.2)

AMR Gene Family: CARD Annotation CARD Database Homepage

ChainsAccessionGene FamilyDrug Class Resistance MachanismProvenance Source (Version)
A, B
ARO:3000221lincosamide nucleotidyltransferase (LNU)lincosamide antibioticantibiotic inactivationCARD (4.0.2)

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR043519Nucleotidyltransferase superfamilyHomologous Superfamily
A, B
IPR019646Aminoglycoside-2''-adenylyltransferaseFamily