Structure of Thermus thermophilus ribosome
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| PB [auth CI] | FlaF_Ig-like | e4v8xCI1 | A: alpha arrays | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: FlaF_Ig-like | ECOD (v295.2) |
| I [auth AI] | Cellulase | e4v8xAI1 | A: alpha arrays | X: beta-propeller-like | H: beta-propeller | T: Nucleic acid-binding protein | F: Cellulase | ECOD (v295.2) |
| H [auth AH] | CENP-M | e4v8xAH1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| OB [auth CH] | CENP-M | e4v8xCH1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| G [auth AG] | CENP-M | e4v8xAG1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| NB [auth CG] | CENP-M | e4v8xCG1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| F [auth AF] | CENP-M | e4v8xAF1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| MB [auth CF] | CENP-M | e4v8xCF1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| ND [auth DZ] | CENP-M | e4v8xDZ1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| GB [auth BZ] | CENP-M | e4v8xBZ1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| FB [auth BY] | CENP-M | e4v8xBY1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| MD [auth DY] | CENP-M | e4v8xDY1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| EB [auth BX] | CENP-M | e4v8xBX1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| LD [auth DX] | CENP-M | e4v8xDX1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| KD [auth DW] | CENP-M | e4v8xDW1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| DB [auth BW] | CENP-M | e4v8xBW1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| JD [auth DV] | CENP-M | e4v8xDV1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| CB [auth BV] | CENP-M | e4v8xBV1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| BB [auth BU] | CENP-M | e4v8xBU1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| ID [auth DU] | CENP-M | e4v8xDU1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| AB [auth BT] | Peptidase_C78 | e4v8xBT1 | A: alpha arrays | X: Alpha-crystallin B chain N-terminal domain | H: Alpha-crystallin B chain N-terminal domain | T: Alpha-crystallin B chain N-terminal domain | F: Peptidase_C78 | ECOD (v295.2) |
| HD [auth DT] | Peptidase_C78 | e4v8xDT1 | A: alpha arrays | X: Alpha-crystallin B chain N-terminal domain | H: Alpha-crystallin B chain N-terminal domain | T: Alpha-crystallin B chain N-terminal domain | F: Peptidase_C78 | ECOD (v295.2) |
| GD [auth DS] | PemK_toxin | e4v8xDS1 | A: alpha arrays | X: Alpha-crystallin B chain N-terminal domain | H: profilin-like | T: C-terminal domain in DHH phosphoesterases | F: PemK_toxin | ECOD (v295.2) |
| ZA [auth BS] | PemK_toxin | e4v8xBS1 | A: alpha arrays | X: Alpha-crystallin B chain N-terminal domain | H: profilin-like | T: C-terminal domain in DHH phosphoesterases | F: PemK_toxin | ECOD (v295.2) |
| FD [auth DR] | CENP-M | e4v8xDR1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| YA [auth BR] | CENP-M | e4v8xBR1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| E [auth AE] | CENP-M | e4v8xAE1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| LB [auth CE] | CENP-M | e4v8xCE1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| ED [auth DQ] | PemK_toxin | e4v8xDQ1 | A: alpha arrays | X: Alpha-crystallin B chain N-terminal domain | H: profilin-like | T: C-terminal domain in DHH phosphoesterases | F: PemK_toxin | ECOD (v295.2) |
| XA [auth BQ] | PemK_toxin | e4v8xBQ1 | A: alpha arrays | X: Alpha-crystallin B chain N-terminal domain | H: profilin-like | T: C-terminal domain in DHH phosphoesterases | F: PemK_toxin | ECOD (v295.2) |
| WA [auth BP] | PemK_toxin | e4v8xBP1 | A: alpha arrays | X: Alpha-crystallin B chain N-terminal domain | H: profilin-like | T: C-terminal domain in DHH phosphoesterases | F: PemK_toxin | ECOD (v295.2) |
| DD [auth DP] | PemK_toxin | e4v8xDP1 | A: alpha arrays | X: Alpha-crystallin B chain N-terminal domain | H: profilin-like | T: C-terminal domain in DHH phosphoesterases | F: PemK_toxin | ECOD (v295.2) |
| CD [auth DO] | CENP-M | e4v8xDO1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| VA [auth BO] | CENP-M | e4v8xBO1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| UA [auth BN] | CENP-M | e4v8xBN1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| BD [auth DN] | CENP-M | e4v8xDN1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| ZC [auth DI] | CENP-M | e4v8xDI1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| SA [auth BI] | CENP-M | e4v8xBI1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| YC [auth DH] | CENP-M | e4v8xDH1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| RA [auth BH] | CENP-M | e4v8xBH1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| XC [auth DG] | CENP-M | e4v8xDG1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| QA [auth BG] | CENP-M | e4v8xBG1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| PA [auth BF] | CENP-M | e4v8xBF1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| WC [auth DF] | CENP-M | e4v8xDF1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| OA [auth BE] | PemK_toxin | e4v8xBE1 | A: alpha arrays | X: Alpha-crystallin B chain N-terminal domain | H: profilin-like | T: C-terminal domain in DHH phosphoesterases | F: PemK_toxin | ECOD (v295.2) |
| VC [auth DE] | PemK_toxin | e4v8xDE1 | A: alpha arrays | X: Alpha-crystallin B chain N-terminal domain | H: profilin-like | T: C-terminal domain in DHH phosphoesterases | F: PemK_toxin | ECOD (v295.2) |
| KB [auth CD] | FlaF_Ig-like | e4v8xCD1 | A: alpha arrays | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: FlaF_Ig-like | ECOD (v295.2) |
| D [auth AD] | FlaF_Ig-like | e4v8xAD1 | A: alpha arrays | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: FlaF_Ig-like | ECOD (v295.2) |
| UC [auth DD] | CENP-M | e4v8xDD1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| NA [auth BD] | CENP-M | e4v8xBD1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| TC [auth DC] | CENP-M | e4v8xDC1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| MA [auth BC] | CENP-M | e4v8xBC1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| QC [auth D9] | CENP-M | e4v8xD91 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| JA [auth B9] | CENP-M | e4v8xB91 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| IA [auth B8] | CENP-M | e4v8xB81 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| PC [auth D8] | CENP-M | e4v8xD81 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| OC [auth D7] | CENP-M | e4v8xD71 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| HA [auth B7] | CENP-M | e4v8xB71 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| GA [auth B6] | PemK_toxin | e4v8xB61 | A: alpha arrays | X: Alpha-crystallin B chain N-terminal domain | H: profilin-like | T: C-terminal domain in DHH phosphoesterases | F: PemK_toxin | ECOD (v295.2) |
| NC [auth D6] | PemK_toxin | e4v8xD61 | A: alpha arrays | X: Alpha-crystallin B chain N-terminal domain | H: profilin-like | T: C-terminal domain in DHH phosphoesterases | F: PemK_toxin | ECOD (v295.2) |
| MC [auth D5] | CENP-M | e4v8xD51 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| FA [auth B5] | CENP-M | e4v8xB51 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| EA [auth B4] | CENP-M | e4v8xB41 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| LC [auth D4] | CENP-M | e4v8xD41 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| C [auth AC] | CENP-M | e4v8xAC1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| JB [auth CC] | CENP-M | e4v8xCC1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| KC [auth D3] | CENP-M | e4v8xD31 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| DA [auth B3] | CENP-M | e4v8xB31 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| CA [auth B2] | CENP-M | e4v8xB21 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| JC [auth D2] | CENP-M | e4v8xD21 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| IC [auth D1] | CENP-M | e4v8xD11 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| BA [auth B1] | CENP-M | e4v8xB11 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| AA [auth B0] | CENP-M | e4v8xB01 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| HC [auth D0] | CENP-M | e4v8xD01 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| FC [auth CY] | CENP-M | e4v8xCY1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| GC [auth CZ] | CENP-M | e4v8xCZ1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| Z [auth AZ] | CENP-M | e4v8xAZ1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| Y [auth AY] | CENP-M | e4v8xAY1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| T [auth AT] | CENP-M | e4v8xAT1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| AC [auth CT] | CENP-M | e4v8xCT1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| B [auth AB] | FlaF_Ig-like | e4v8xAB1 | A: alpha arrays | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: FlaF_Ig-like | ECOD (v295.2) |
| IB [auth CB] | FlaF_Ig-like | e4v8xCB1 | A: alpha arrays | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: FlaF_Ig-like | ECOD (v295.2) |
| S [auth AS] | Cellulase | e4v8xAS1 | A: alpha arrays | X: beta-propeller-like | H: beta-propeller | T: Nucleic acid-binding protein | F: Cellulase | ECOD (v295.2) |
| ZB [auth CS] | Cellulase | e4v8xCS1 | A: alpha arrays | X: beta-propeller-like | H: beta-propeller | T: Nucleic acid-binding protein | F: Cellulase | ECOD (v295.2) |
| R [auth AR] | CENP-M | e4v8xAR1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| YB [auth CR] | CENP-M | e4v8xCR1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| Q [auth AQ] | Cellulase | e4v8xAQ1 | A: alpha arrays | X: beta-propeller-like | H: beta-propeller | T: Nucleic acid-binding protein | F: Cellulase | ECOD (v295.2) |
| XB [auth CQ] | Cellulase | e4v8xCQ1 | A: alpha arrays | X: beta-propeller-like | H: beta-propeller | T: Nucleic acid-binding protein | F: Cellulase | ECOD (v295.2) |
| WB [auth CP] | CENP-M | e4v8xCP1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| P [auth AP] | CENP-M | e4v8xAP1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| VB [auth CO] | CENP-M | e4v8xCO1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| O [auth AO] | CENP-M | e4v8xAO1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| UB [auth CN] | CENP-M | e4v8xCN1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| N [auth AN] | CENP-M | e4v8xAN1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| M [auth AM] | Cellulase | e4v8xAM1 | A: alpha arrays | X: beta-propeller-like | H: beta-propeller | T: Nucleic acid-binding protein | F: Cellulase | ECOD (v295.2) |
| TB [auth CM] | Cellulase | e4v8xCM1 | A: alpha arrays | X: beta-propeller-like | H: beta-propeller | T: Nucleic acid-binding protein | F: Cellulase | ECOD (v295.2) |
| L [auth AL] | CENP-M | e4v8xAL1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| SB [auth CL] | CENP-M | e4v8xCL1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| RB [auth CK] | CENP-M | e4v8xCK1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| K [auth AK] | CENP-M | e4v8xAK1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| QB [auth CJ] | CENP-M | e4v8xCJ1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
| J [auth AJ] | CENP-M | e4v8xAJ1 | A: alpha arrays | X: Type III secretion system domain-like | H: Antibiotic binding domain of TipA-like multidrug resistance regulators | T: Antibiotic binding domain of TipA-like multidrug resistance regulators | F: CENP-M | ECOD (v295.2) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| I [auth AI], PB [auth CI] | PF00380 | Ribosomal protein S9/S16 (Ribosomal_S9) | Ribosomal protein S9/S16 | - | Family |
| G [auth AG], NB [auth CG] | PF00177 | Ribosomal protein S7p/S5e (Ribosomal_S7) | Ribosomal protein S7p/S5e | This family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. | Domain |
| GB [auth BZ], ND [auth DZ] | PF14693 | Ribosomal protein TL5, C-terminal domain (Ribosomal_TL5_C) | Ribosomal protein TL5, C-terminal domain | This family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC pr ... | Domain |
| GB [auth BZ], ND [auth DZ] | PF01386 | Ribosomal L25p family (Ribosomal_L25p) | Ribosomal L25p family | Ribosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress. | Domain |
| FB [auth BY], MD [auth DY] | PF17136 | Large ribosomal subunit protein uL24, C-terminal domain (ribosomal_L24) | Large ribosomal subunit protein uL24, C-terminal domain | This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 m ... | Domain |
| FB [auth BY], MD [auth DY] | PF00467 | KOW motif (KOW) | KOW motif | - | Family |
| EB [auth BX], LD [auth DX] | PF00276 | Ribosomal protein L23 (Ribosomal_L23) | Ribosomal protein L23 | - | Family |
| DB [auth BW], KD [auth DW] | PF00237 | Ribosomal protein L22p/L17e (Ribosomal_L22) | Ribosomal protein L22p/L17e | This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. | Domain |
| CB [auth BV], JD [auth DV] | PF00829 | Ribosomal prokaryotic L21 protein (Ribosomal_L21p) | Ribosomal prokaryotic L21 protein | - | Family |
| BB [auth BU], ID [auth DU] | PF00453 | Ribosomal protein L20 (Ribosomal_L20) | Ribosomal protein L20 | - | Family |
| AB [auth BT], HD [auth DT] | PF01245 | Ribosomal protein L19 (Ribosomal_L19) | Ribosomal protein L19 | - | Family |
| FD [auth DR], YA [auth BR] | PF01196 | Ribosomal protein L17 (Ribosomal_L17) | Ribosomal protein L17 | - | Family |
| ED [auth DQ], XA [auth BQ] | PF00252 | Ribosomal protein L16p/L10e (Ribosomal_L16) | Ribosomal protein L16p/L10e | Domain | |
| DD [auth DP], WA [auth BP] | PF00828 | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A) | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A | This family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. | Domain |
| CD [auth DO], VA [auth BO] | PF00238 | Ribosomal protein L14p/L23e (Ribosomal_L14) | Ribosomal protein L14p/L23e | Domain | |
| BD [auth DN], UA [auth BN] | PF00572 | Ribosomal protein L13 (Ribosomal_L13) | Ribosomal protein L13 | - | Family |
| SA [auth BI], ZC [auth DI] | PF01281 | Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N) | Ribosomal protein L9, N-terminal domain | Domain | |
| SA [auth BI], ZC [auth DI] | PF03948 | Ribosomal protein L9, C-terminal domain (Ribosomal_L9_C) | Ribosomal protein L9, C-terminal domain | Domain | |
| RA [auth BH], YC [auth DH] | PF00347 | Ribosomal protein L6 (Ribosomal_L6) | Ribosomal protein L6 | Domain | |
| QA [auth BG], XC [auth DG] | PF00281 | Ribosomal protein L5 (Ribosomal_L5) | Ribosomal protein L5 | Domain | |
| QA [auth BG], XC [auth DG] | PF00673 | ribosomal L5P family C-terminus (Ribosomal_L5_C) | ribosomal L5P family C-terminus | This region is found associated with Pfam:PF00281. | Domain |
| PA [auth BF], WC [auth DF] | PF00573 | Ribosomal protein L4/L1 family (Ribosomal_L4) | Ribosomal protein L4/L1 family | - | Family |
| OA [auth BE], VC [auth DE] | PF00297 | Ribosomal protein L3 (Ribosomal_L3) | Ribosomal protein L3 | - | Family |
| D [auth AD], KB [auth CD] | PF00163 | Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4) | Ribosomal protein S4/S9 N-terminal domain | - | Family |
| D [auth AD], KB [auth CD] | PF01479 | S4 domain (S4) | S4 domain | The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ... | Domain |
| NA [auth BD], UC [auth DD] | PF03947 | Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C) | Ribosomal Proteins L2, C-terminal domain | Domain | |
| NA [auth BD], UC [auth DD] | PF00181 | Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N) | Ribosomal Proteins L2, RNA binding N-terminal domain | Domain | |
| MA [auth BC], TC [auth DC] | PF00687 | Ribosomal protein L1p/L10e family (Ribosomal_L1) | Ribosomal protein L1p/L10e family | This family includes prokaryotic L1 and eukaryotic L10. | Domain |
| JA [auth B9], QC [auth D9] | PF00444 | Ribosomal protein L36 (Ribosomal_L36) | Ribosomal protein L36 | Domain | |
| IA [auth B8], PC [auth D8] | PF01632 | Ribosomal protein L35 (Ribosomal_L35p) | Ribosomal protein L35 | - | Family |
| HA [auth B7], OC [auth D7] | PF00468 | Ribosomal protein L34 (Ribosomal_L34) | Ribosomal protein L34 | - | Family |
| GA [auth B6], NC [auth D6] | PF00471 | Ribosomal protein L33 (Ribosomal_L33) | Ribosomal protein L33 | - | Family |
| FA [auth B5], MC [auth D5] | PF01783 | Ribosomal L32p protein family (Ribosomal_L32p) | Ribosomal L32p protein family | - | Family |
| EA [auth B4], LC [auth D4] | PF01197 | Ribosomal protein L31 (Ribosomal_L31) | Ribosomal protein L31 | - | Family |
| C [auth AC], JB [auth CC] | PF07650 | KH domain (KH_2) | KH domain | Domain | |
| C [auth AC], JB [auth CC] | PF00189 | Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C) | Ribosomal protein S3, C-terminal domain | This family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. | Domain |
| DA [auth B3], KC [auth D3] | PF00327 | Ribosomal protein L30p/L7e (Ribosomal_L30) | Ribosomal protein L30p/L7e | This family includes prokaryotic L30 and eukaryotic L7. | Domain |
| CA [auth B2], JC [auth D2] | PF00831 | Ribosomal L29 protein (Ribosomal_L29) | Ribosomal L29 protein | - | Family |
| BA [auth B1], IC [auth D1] | PF00830 | Ribosomal L28 family (Ribosomal_L28) | Ribosomal L28 family | - | Family |
| AA [auth B0], HC [auth D0] | PF01016 | Ribosomal L27 protein (Ribosomal_L27) | Ribosomal L27 protein | - | Family |
| FC [auth CY], GC [auth CZ], Y [auth AY], Z [auth AZ] | PF06769 | YoeB-like toxin of bacterial type II toxin-antitoxin system (YoeB_toxin) | YoeB-like toxin of bacterial type II toxin-antitoxin system | YoeB_toxin is a family of bacterial toxins that forms one component of the type II toxin-antitoxin system in E. coli whose antitoxin is represented by YefM, found in Pfam:PF02604. The plasmid encoded Axe-Txe proteins in Enterococcus faecium act as a ... | Domain |
| B [auth AB], IB [auth CB] | PF00318 | Ribosomal protein S2 (Ribosomal_S2) | Ribosomal protein S2 | - | Family |
| R [auth AR], YB [auth CR] | PF01084 | Ribosomal protein S18 (Ribosomal_S18) | Ribosomal protein S18 | - | Family |
| Q [auth AQ], XB [auth CQ] | PF00366 | Ribosomal protein S17 (Ribosomal_S17) | Ribosomal protein S17 | Domain | |
| P [auth AP], WB [auth CP] | PF00886 | Ribosomal protein S16 (Ribosomal_S16) | Ribosomal protein S16 | - | Family |
| M [auth AM], TB [auth CM] | PF00416 | Ribosomal protein S13/S18 (Ribosomal_S13) | Ribosomal protein S13/S18 | - | Family |
| K [auth AK], RB [auth CK] | PF00411 | Ribosomal protein S11 (Ribosomal_S11) | Ribosomal protein S11 | - | Family |