4V7P | pdb_00004v7p

Recognition of the amber stop codon by release factor RF1.

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
LC [auth DD]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8093624 3001473 SCOP2B (2022-06-29)
D [auth AD]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8093624 3001473 SCOP2B (2022-06-29)
J [auth AJ]SCOP2B SuperfamilyRibosomal protein S10 8098850 3001336 SCOP2B (2022-06-29)
RC [auth DJ]SCOP2B SuperfamilyRibosomal protein S10 8098850 3001336 SCOP2B (2022-06-29)
L [auth AL]SCOP2B SuperfamilyNucleic acid-binding proteins 8098824 3000135 SCOP2B (2022-06-29)
TC [auth DL]SCOP2B SuperfamilyNucleic acid-binding proteins 8098824 3000135 SCOP2B (2022-06-29)
MB [auth CJ]SCOP2B SuperfamilyRibosomal protein L13 8099906 3001134 SCOP2B (2022-06-29)
HA [auth BJ]SCOP2B SuperfamilyRibosomal protein L13 8099906 3001134 SCOP2B (2022-06-29)
RB [auth CO]SCOP2B SuperfamilyTranslational machinery components 8074014 3000571 SCOP2B (2022-06-29)
MA [auth BO]SCOP2B SuperfamilyTranslational machinery components 8074014 3000571 SCOP2B (2022-06-29)
UB [auth CR]SCOP2B Superfamilyl21p-like 8093656 3002005 SCOP2B (2022-06-29)
PA [auth BR]SCOP2B Superfamilyl21p-like 8093656 3002005 SCOP2B (2022-06-29)
I [auth AI]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8093728 3000100 SCOP2B (2022-06-29)
QC [auth DI]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8093728 3000100 SCOP2B (2022-06-29)
PC [auth DH]SCOP2B SuperfamilyRibosomal protein S8 8098860 3000709 SCOP2B (2022-06-29)
H [auth AH]SCOP2B SuperfamilyRibosomal protein S8 8098860 3000709 SCOP2B (2022-06-29)
OC [auth DG]SCOP2B SuperfamilyRibosomal protein S7 8093626 3000799 SCOP2B (2022-06-29)
G [auth AG]SCOP2B SuperfamilyRibosomal protein S7 8093626 3000799 SCOP2B (2022-06-29)
F [auth AF]SCOP2B SuperfamilyRibosomal protein S6 8098858 3001323 SCOP2B (2022-06-29)
NC [auth DF]SCOP2B SuperfamilyRibosomal protein S6 8098858 3001323 SCOP2B (2022-06-29)
CB [auth B5]SCOP2B SuperfamilyL35p-like 8099912 3000790 SCOP2B (2022-06-29)
HC [auth C5]SCOP2B SuperfamilyL35p-like 8099912 3000790 SCOP2B (2022-06-29)
FC [auth C3]SCOP2B SuperfamilyZn-binding ribosomal proteins 8099892 3001320 SCOP2B (2022-06-29)
AB [auth B3]SCOP2B SuperfamilyZn-binding ribosomal proteins 8099892 3001320 SCOP2B (2022-06-29)
EC [auth C2]SCOP2B SuperfamilyZn-binding ribosomal proteins 8081579 3001320 SCOP2B (2022-06-29)
ZA [auth B2]SCOP2B SuperfamilyZn-binding ribosomal proteins 8081579 3001320 SCOP2B (2022-06-29)
CC [auth CZ]SCOP2B SuperfamilyRibosomal protein L30p/L7e 8099900 3001378 SCOP2B (2022-06-29)
XA [auth BZ]SCOP2B SuperfamilyRibosomal protein L30p/L7e 8099900 3001378 SCOP2B (2022-06-29)
BC [auth CY]SCOP2B SuperfamilyRibosomal protein L29 (L29p) 8076744 3000713 SCOP2B (2022-06-29)
WA [auth BY]SCOP2B SuperfamilyRibosomal protein L29 (L29p) 8076744 3000713 SCOP2B (2022-06-29)
RA [auth BT]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8099896 3000210 SCOP2B (2022-06-29)
WB [auth CT]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8099896 3000210 SCOP2B (2022-06-29)
VB [auth CS]SCOP2B SuperfamilyRibosomal protein L22 8099898 3001078 SCOP2B (2022-06-29)
QA [auth BS]SCOP2B SuperfamilyRibosomal protein L22 8099898 3001078 SCOP2B (2022-06-29)
OA [auth BQ]SCOP2B SuperfamilyRibosomal protein L20 8093660 3000563 SCOP2B (2022-06-29)
TB [auth CQ]SCOP2B SuperfamilyRibosomal protein L20 8093660 3000563 SCOP2B (2022-06-29)
OB [auth CL]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8099902 3001045 SCOP2B (2022-06-29)
JA [auth BL]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8099902 3001045 SCOP2B (2022-06-29)
IA [auth BK]SCOP2B Superfamily50S Ribosomal protein L14-like 8093738 3000433 SCOP2B (2022-06-29)
NB [auth CK]SCOP2B Superfamily50S Ribosomal protein L14-like 8093738 3000433 SCOP2B (2022-06-29)
GB [auth CD]SCOP2B SuperfamilyTranslational proteins 8089140 3000811 SCOP2B (2022-06-29)
BA [auth BD]SCOP2B SuperfamilyTranslational proteins 8089140 3000811 SCOP2B (2022-06-29)
T [auth AT]SCOP2 FamilyRibosomal protein S20 8101558 4000787 SCOP2 (2022-06-29)
T [auth AT]SCOP2 SuperfamilyRibosomal protein S20 8101559 3001362 SCOP2 (2022-06-29)
BD [auth DT]SCOP2B SuperfamilyRibosomal protein S20 8101559 3001362 SCOP2B (2022-06-29)
JC [auth DB]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8063836 3001397 SCOP2B (2022-06-29)
B [auth AB]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8063836 3001397 SCOP2B (2022-06-29)
AD [auth DS]SCOP2B SuperfamilyRibosomal protein S19 8098856 3000686 SCOP2B (2022-06-29)
S [auth AS]SCOP2B SuperfamilyRibosomal protein S19 8098856 3000686 SCOP2B (2022-06-29)
VC [auth DN]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052583 3000068 SCOP2B (2022-06-29)
N [auth AN]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052583 3000068 SCOP2B (2022-06-29)
UC [auth DM]SCOP2B SuperfamilyS13-like H2TH domain 8098854 3000053 SCOP2B (2022-06-29)
M [auth AM]SCOP2B SuperfamilyS13-like H2TH domain 8098854 3000053 SCOP2B (2022-06-29)
K [auth AK]SCOP2B SuperfamilyTranslational machinery components 8098852 3000571 SCOP2B (2022-06-29)
SC [auth DK]SCOP2B SuperfamilyTranslational machinery components 8098852 3000571 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
LC [auth DD]S4e4v7pDD1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
D [auth AD]S4e4v7pAD1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
MC [auth DE]Ribosomal_S5_Ce4v7pDE2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
MC [auth DE]Ribosomal_S5e4v7pDE1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5ECOD (1.6)
E [auth AE]Ribosomal_S5_Ce4v7pAE2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
E [auth AE]Ribosomal_S5e4v7pAE1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5ECOD (1.6)
J [auth AJ]Ribosomal_S10e4v7pAJ1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10ECOD (1.6)
RC [auth DJ]Ribosomal_S10e4v7pDJ1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10ECOD (1.6)
L [auth AL]Ribosom_S12_S23e4v7pAL1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
TC [auth DL]Ribosom_S12_S23e4v7pDL1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
O [auth AO]Ribosomal_S15_1e4v7pAO1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
WC [auth DO]Ribosomal_S15_1e4v7pDO1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
ZC [auth DR]Ribosomal_S18e4v7pDR1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
R [auth AR]Ribosomal_S18e4v7pAR1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
DD [auth DV]PCRF_Ne4v7pDV3 A: alpha bundlesX: Release factor (Pfam 00472) N-terminal alpha helical domain (From Topology)H: Release factor (Pfam 00472) N-terminal alpha helical domain (From Topology)T: Release factor (Pfam 00472) N-terminal alpha helical domainF: PCRF_NECOD (1.6)
DD [auth DV]PCRF_Ce4v7pDV2 A: a+b two layersX: Alpha-beta plaitsH: Ferredoxin-like domain in release factor (From Topology)T: Ferredoxin-like domain in release factorF: PCRF_CECOD (1.6)
DD [auth DV]RF-1_Ne4v7pDV1 A: a+b two layersX: dsRBD-likeH: Peptidyl-tRNA hydrolase domain-like (From Topology)T: Peptidyl-tRNA hydrolase domain-likeF: RF-1_NECOD (1.6)
DD [auth DV]RF-1_Ce4v7pDV4 A: a+b two layersX: dsRBD-likeH: Peptidyl-tRNA hydrolase domain-like (From Topology)T: Peptidyl-tRNA hydrolase domain-likeF: RF-1_CECOD (1.6)
V [auth AV]PCRF_Ne4v7pAV3 A: alpha bundlesX: Release factor (Pfam 00472) N-terminal alpha helical domain (From Topology)H: Release factor (Pfam 00472) N-terminal alpha helical domain (From Topology)T: Release factor (Pfam 00472) N-terminal alpha helical domainF: PCRF_NECOD (1.6)
V [auth AV]PCRF_Ce4v7pAV2 A: a+b two layersX: Alpha-beta plaitsH: Ferredoxin-like domain in release factor (From Topology)T: Ferredoxin-like domain in release factorF: PCRF_CECOD (1.6)
V [auth AV]RF-1_Ne4v7pAV1 A: a+b two layersX: dsRBD-likeH: Peptidyl-tRNA hydrolase domain-like (From Topology)T: Peptidyl-tRNA hydrolase domain-likeF: RF-1_NECOD (1.6)
V [auth AV]RF-1_Ce4v7pAV4 A: a+b two layersX: dsRBD-likeH: Peptidyl-tRNA hydrolase domain-like (From Topology)T: Peptidyl-tRNA hydrolase domain-likeF: RF-1_CECOD (1.6)
IB [auth CF]Ribosomal_L5_Ce4v7pCF1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
DA [auth BF]Ribosomal_L5_Ce4v7pBF1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
MB [auth CJ]Ribosomal_L13e4v7pCJ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
HA [auth BJ]Ribosomal_L13e4v7pBJ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
RB [auth CO]Ribosomal_L18pe4v7pCO1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
MA [auth BO]Ribosomal_L18pe4v7pBO1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
UB [auth CR]Ribosomal_L21pe4v7pCR1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
PA [auth BR]Ribosomal_L21pe4v7pBR1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
UA [auth BW]Ribosomal_L27e4v7pBW1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
ZB [auth CW]Ribosomal_L27e4v7pCW1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
BB [auth B4]Ribosomal_L34e4v7pB41 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34ECOD (1.6)
GC [auth C4]Ribosomal_L34e4v7pC41 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34ECOD (1.6)
I [auth AI]Ribosomal_S9e4v7pAI1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
QC [auth DI]Ribosomal_S9e4v7pDI1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
PC [auth DH]Ribosomal_S8_Ne4v7pDH1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_NECOD (1.6)
PC [auth DH]Ribosomal_S8_Ce4v7pDH2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_CECOD (1.6)
H [auth AH]Ribosomal_S8_Ne4v7pAH1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_NECOD (1.6)
H [auth AH]Ribosomal_S8_Ce4v7pAH2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_CECOD (1.6)
OC [auth DG]Ribosomal_S7_1e4v7pDG1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
G [auth AG]Ribosomal_S7_1e4v7pAG1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
F [auth AF]Ribosomal_S6e4v7pAF1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6ECOD (1.6)
NC [auth DF]Ribosomal_S6e4v7pDF1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6ECOD (1.6)
CB [auth B5]Ribosomal_L35pe4v7pB51 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
HC [auth C5]Ribosomal_L35pe4v7pC51 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
FC [auth C3]Ribosomal_L33e4v7pC31 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
AB [auth B3]Ribosomal_L33e4v7pB31 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
EC [auth C2]Ribosomal_L32pe4v7pC21 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L32pECOD (1.6)
ZA [auth B2]Ribosomal_L32pe4v7pB21 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L32pECOD (1.6)
YA [auth B1]Ribosomal_L31e4v7pB11 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: Ribosomal_L31ECOD (1.6)
DC [auth C1]Ribosomal_L31e4v7pC11 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: Ribosomal_L31ECOD (1.6)
CC [auth CZ]Ribosomal_L30e4v7pCZ1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
XA [auth BZ]Ribosomal_L30e4v7pBZ1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
BC [auth CY]Ribosomal_L29e4v7pCY1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29ECOD (1.6)
WA [auth BY]Ribosomal_L29e4v7pBY1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29ECOD (1.6)
AC [auth CX]Ribosomal_L28e4v7pCX1 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: Ribosomal_L28ECOD (1.6)
VA [auth BX]Ribosomal_L28e4v7pBX1 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: Ribosomal_L28ECOD (1.6)
TA [auth BV]Ribosomal_L25pe4v7pBV1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_L25pECOD (1.6)
TA [auth BV]Ribosomal_TL5_Ce4v7pBV2 A: a+b complex topologyX: Ribosomal protein TL5/L25 C-terminal domain-likeH: Ribosomal protein TL5/L25 C-terminal domain-related (From Topology)T: Ribosomal protein TL5/L25 C-terminal domain-relatedF: Ribosomal_TL5_CECOD (1.6)
YB [auth CV]Ribosomal_L25pe4v7pCV1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_L25pECOD (1.6)
YB [auth CV]Ribosomal_TL5_Ce4v7pCV2 A: a+b complex topologyX: Ribosomal protein TL5/L25 C-terminal domain-likeH: Ribosomal protein TL5/L25 C-terminal domain-related (From Topology)T: Ribosomal protein TL5/L25 C-terminal domain-relatedF: Ribosomal_TL5_CECOD (1.6)
SA [auth BU]ribosomal_L24e4v7pBU1 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24ECOD (1.6)
XB [auth CU]ribosomal_L24e4v7pCU1 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24ECOD (1.6)
RA [auth BT]Ribosomal_L23_2e4v7pBT1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
WB [auth CT]Ribosomal_L23_2e4v7pCT1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
VB [auth CS]Ribosomal_L22e4v7pCS1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
QA [auth BS]Ribosomal_L22e4v7pBS1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
OA [auth BQ]Ribosomal_L20e4v7pBQ1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
TB [auth CQ]Ribosomal_L20e4v7pCQ1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
SB [auth CP]Ribosomal_L19e4v7pCP1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
NA [auth BP]Ribosomal_L19e4v7pBP1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
QB [auth CN]Ribosomal_L17_1e4v7pCN1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17_1ECOD (1.6)
LA [auth BN]Ribosomal_L17_1e4v7pBN1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17_1ECOD (1.6)
KA [auth BM]Ribosomal_L16e4v7pBM1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
PB [auth CM]Ribosomal_L16e4v7pCM1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
OB [auth CL]Ribosomal_L27Ae4v7pCL1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
JA [auth BL]Ribosomal_L27Ae4v7pBL1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
IA [auth BK]Ribosomal_L14e4v7pBK1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
NB [auth CK]Ribosomal_L14e4v7pCK1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
KB [auth CH]Ribosomal_L9_Ne4v7pCH2 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: Ribosomal_L9_NECOD (1.6)
KB [auth CH]Ribosomal_L9_Ce4v7pCH1 A: a+b two layersX: Ribosomal protein L9 C-domain (From Topology)H: Ribosomal protein L9 C-domain (From Topology)T: Ribosomal protein L9 C-domainF: Ribosomal_L9_CECOD (1.6)
FA [auth BH]Ribosomal_L9_Ne4v7pBH2 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: Ribosomal_L9_NECOD (1.6)
FA [auth BH]Ribosomal_L9_Ce4v7pBH1 A: a+b two layersX: Ribosomal protein L9 C-domain (From Topology)H: Ribosomal protein L9 C-domain (From Topology)T: Ribosomal protein L9 C-domainF: Ribosomal_L9_CECOD (1.6)
EA [auth BG]Ribosomal_L6e4v7pBG2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
EA [auth BG]Ribosomal_L6_1e4v7pBG1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_1ECOD (1.6)
JB [auth CG]Ribosomal_L6e4v7pCG2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
JB [auth CG]Ribosomal_L6_1e4v7pCG1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_1ECOD (1.6)
C [auth AC]Ribosomal_S3_Ce4v7pAC1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
C [auth AC]KH_2_1e4v7pAC2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_1ECOD (1.6)
KC [auth DC]Ribosomal_S3_Ce4v7pDC1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
KC [auth DC]KH_2_1e4v7pDC2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_1ECOD (1.6)
HB [auth CE]Ribosomal_L4e4v7pCE1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
CA [auth BE]Ribosomal_L4e4v7pBE1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
GB [auth CD]Ribosomal_L3e4v7pCD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
BA [auth BD]Ribosomal_L3e4v7pBD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
AA [auth BC]Ribosomal_L2_1e4v7pBC2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
AA [auth BC]Ribosomal_L2_Ce4v7pBC1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
FB [auth CC]Ribosomal_L2_1e4v7pCC2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
FB [auth CC]Ribosomal_L2_Ce4v7pCC1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
T [auth AT]Ribosomal_S20pe4v7pAT1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: Ribosomal_S20pECOD (1.6)
BD [auth DT]Ribosomal_S20pe4v7pDT1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: Ribosomal_S20pECOD (1.6)
JC [auth DB]Ribosomal_S2e4v7pDB1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2ECOD (1.6)
B [auth AB]Ribosomal_S2e4v7pAB1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2ECOD (1.6)
AD [auth DS]Ribosomal_S19e4v7pDS1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
S [auth AS]Ribosomal_S19e4v7pAS1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
YC [auth DQ]Ribosomal_S17_1e4v7pDQ1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
Q [auth AQ]Ribosomal_S17_1e4v7pAQ1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
XC [auth DP]Ribosomal_S16_1e4v7pDP1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16_1ECOD (1.6)
P [auth AP]Ribosomal_S16_1e4v7pAP1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16_1ECOD (1.6)
VC [auth DN]Ribosomal_S14e4v7pDN1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14ECOD (1.6)
N [auth AN]Ribosomal_S14e4v7pAN1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14ECOD (1.6)
UC [auth DM]Ribosomal_S13_1e4v7pDM1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13_1ECOD (1.6)
M [auth AM]Ribosomal_S13_1e4v7pAM1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13_1ECOD (1.6)
K [auth AK]Ribosomal_S11e4v7pAK1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
SC [auth DK]Ribosomal_S11e4v7pDK1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
D [auth AD],
LC [auth DD]		PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
D [auth AD],
LC [auth DD]		PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
E [auth AE],
MC [auth DE]		PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domainDomain
E [auth AE],
MC [auth DE]		PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domainDomain
J [auth AJ],
RC [auth DJ]		PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain
L [auth AL],
TC [auth DL]		PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. Domain
O [auth AO],
WC [auth DO]		PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15Domain
R [auth AR],
ZC [auth DR]		PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
DD [auth DV],
V [auth AV]		PF03462PCRF domain (PCRF)PCRF domainThis domain is found in peptide chain release factors. Domain
DD [auth DV],
V [auth AV]		PF00472RF-1 domain (RF-1)RF-1 domainThis domain is found in peptide chain release factors such as RF-1 (Swiss:P07011) and RF-2 (Swiss:P07012), and a number of smaller proteins of unknown function such as Swiss:P40711. This domain contains the peptidyl-tRNA hydrolase activity. The domai ...This domain is found in peptide chain release factors such as RF-1 (Swiss:P07011) and RF-2 (Swiss:P07012), and a number of smaller proteins of unknown function such as Swiss:P40711. This domain contains the peptidyl-tRNA hydrolase activity. The domain contains a highly conserved motif GGQ, where the glutamine is thought to coordinate the water that mediates the hydrolysis.
Domain
DA [auth BF],
IB [auth CF]		PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
DA [auth BF],
IB [auth CF]		PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
HA [auth BJ],
MB [auth CJ]		PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
PA [auth BR],
UB [auth CR]		PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
BB [auth B4],
GC [auth C4]		PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
I [auth AI],
QC [auth DI]		PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
H [auth AH],
PC [auth DH]		PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8Domain
G [auth AG],
OC [auth DG]		PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. Domain
F [auth AF],
NC [auth DF]		PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6Domain
CB [auth B5],
HC [auth C5]		PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
EC [auth C2],
ZA [auth B2]		PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
CC [auth CZ],
XA [auth BZ]		PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
BC [auth CY],
WA [auth BY]		PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
TA [auth BV],
YB [auth CV]		PF14693Ribosomal protein TL5, C-terminal domain (Ribosomal_TL5_C)Ribosomal protein TL5, C-terminal domainThis family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC pr ...This family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC proteins. TL5 or CTC are not found in Eukarya or Archaea. In some Bacteria, including E. coli, this ribosomal subunit occurs as a single domain protein (named Ribosomal subunit L25), where the only domain is homologous to TL5 N-terminal domain (hence included in family Pfam:PF01386). The function of the C-terminal domain of TLC is at present unknown.
Domain
TA [auth BV],
YB [auth CV]		PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress. Domain
SA [auth BU],
XB [auth CU]		PF17136Large ribosomal subunit protein uL24, C-terminal domain (ribosomal_L24)Large ribosomal subunit protein uL24, C-terminal domainThis entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 m ...This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 makes very minor contributions to the biogenesis structure, and function of 60s ribosomal subunits [1]. However, RPL24 is essential to generate the first intermediate during 50s ribosomal subunits assembly [2]. RPL26 have an extra-ribosomal function to enhances p53 translation after DNA damage [3].
Domain
SA [auth BU],
XB [auth CU]		PF00467KOW motif (KOW)KOW motif- Family
RA [auth BT],
WB [auth CT]		PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
QA [auth BS],
VB [auth CS]		PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
OA [auth BQ],
TB [auth CQ]		PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
NA [auth BP],
SB [auth CP]		PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
LA [auth BN],
QB [auth CN]		PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
JA [auth BL],
OB [auth CL]		PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
IA [auth BK],
NB [auth CK]		PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
FA [auth BH],
KB [auth CH]		PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domainDomain
FA [auth BH],
KB [auth CH]		PF03948Ribosomal protein L9, C-terminal domain (Ribosomal_L9_C)Ribosomal protein L9, C-terminal domainDomain
EA [auth BG],
JB [auth CG]		PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6Domain
C [auth AC],
KC [auth DC]		PF07650KH domain (KH_2)KH domainDomain
C [auth AC],
KC [auth DC]		PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. Domain
CA [auth BE],
HB [auth CE]		PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
BA [auth BD],
GB [auth CD]		PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
AA [auth BC],
FB [auth CC]		PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
AA [auth BC],
FB [auth CC]		PF00181Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)Ribosomal Proteins L2, RNA binding N-terminal domainDomain
CD [auth DU],
U [auth AU]		PF1707030S ribosomal protein Thx (Thx)30S ribosomal protein Thx- Family
BD [auth DT],
T [auth AT]		PF01649Ribosomal protein S20 (Ribosomal_S20p)Ribosomal protein S20- Family
B [auth AB],
JC [auth DB]		PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
AD [auth DS],
S [auth AS]		PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19Domain
Q [auth AQ],
YC [auth DQ]		PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17Domain
P [auth AP],
XC [auth DP]		PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
N [auth AN],
VC [auth DN]		PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
M [auth AM],
UC [auth DM]		PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
K [auth AK],
SC [auth DK]		PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
D [auth AD],
LC [auth DD]		30S ribosomal protein S4
E [auth AE],
MC [auth DE]		30S ribosomal protein S5
J [auth AJ],
RC [auth DJ]		30S ribosomal protein S10
L [auth AL],
TC [auth DL]		30S ribosomal protein S12
O [auth AO],
WC [auth DO]		30S ribosomal protein S15
R [auth AR],
ZC [auth DR]		30S ribosomal protein S18
DD [auth DV],
V [auth AV]		Peptide chain release factor 1 -
ED [auth DW],
W [auth AW]		P-site tRNA-fMet---
DA [auth BF],
IB [auth CF]		50S ribosomal protein L5
HA [auth BJ],
MB [auth CJ]		50S ribosomal protein L13
MA [auth BO],
RB [auth CO]		50S ribosomal protein L18
PA [auth BR],
UB [auth CR]		50S ribosomal protein L21
UA [auth BW],
ZB [auth CW]		50S ribosomal protein L27
BB [auth B4],
GC [auth C4]		50S ribosomal protein L34
I [auth AI],
QC [auth DI]		30S ribosomal protein S9
H [auth AH],
PC [auth DH]		30S ribosomal protein S8
G [auth AG],
OC [auth DG]		30S ribosomal protein S7
F [auth AF],
NC [auth DF]		30S ribosomal protein S6
FD [auth DX]messenger RNA (5'-R(*AP*AP*UP*GP*UP*AP*G)-3')---
CB [auth B5],
HC [auth C5]		50S ribosomal protein L35
AB [auth B3],
FC [auth C3]		50S ribosomal protein L33
EC [auth C2],
ZA [auth B2]		50S ribosomal protein L32
DC [auth C1],
YA [auth B1]		50S ribosomal protein L31
CC [auth CZ],
XA [auth BZ]		50S ribosomal protein L30
BC [auth CY],
WA [auth BY]		50S ribosomal protein L29
AC [auth CX],
VA [auth BX]		50S ribosomal protein L28
TA [auth BV],
YB [auth CV]		50S ribosomal protein L25
SA [auth BU],
XB [auth CU]		50S ribosomal protein L24
RA [auth BT],
WB [auth CT]		50S ribosomal protein L23
QA [auth BS],
VB [auth CS]		50S ribosomal protein L22
OA [auth BQ],
TB [auth CQ]		50S ribosomal protein L20
NA [auth BP],
SB [auth CP]		50S ribosomal protein L19
LA [auth BN],
QB [auth CN]		50S ribosomal protein L17
KA [auth BM],
PB [auth CM]		50S ribosomal protein L16
JA [auth BL],
OB [auth CL]		50S ribosomal protein L15
IA [auth BK],
NB [auth CK]		50S ribosomal protein L14
GA [auth BI],
LB [auth CI]		50S ribosomal protein L10
FA [auth BH],
KB [auth CH]		50S ribosomal protein L9
EA [auth BG],
JB [auth CG]		50S ribosomal protein L6
C [auth AC],
KC [auth DC]		30S ribosomal protein S3
CA [auth BE],
HB [auth CE]		50S ribosomal protein L4
BA [auth BD],
GB [auth CD]		50S ribosomal protein L3
AA [auth BC],
FB [auth CC]		50S ribosomal protein L2
EB [auth CB],
Z [auth BB]		5S ribosomal RNA---
DB [auth CA],
Y [auth BA]		23S ribosomal RNA---
X [auth AX]messenger RNA (5'-R(*AP*AP*UP*GP*UP*AP*G)-3')---
CD [auth DU],
U [auth AU]		30S ribosomal protein Thx -
BD [auth DT],
T [auth AT]		30S ribosomal protein S20
B [auth AB],
JC [auth DB]		30S ribosomal protein S2
AD [auth DS],
S [auth AS]		30S ribosomal protein S19
Q [auth AQ],
YC [auth DQ]		30S ribosomal protein S17
P [auth AP],
XC [auth DP]		30S ribosomal protein S16
N [auth AN],
VC [auth DN]		30S ribosomal protein S14
M [auth AM],
UC [auth DM]		30S ribosomal protein S13
K [auth AK],
SC [auth DK]		30S ribosomal protein S11
A [auth AA],
IC [auth DA]		16S rRNA (1504-MER)---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
D [auth AD],
LC [auth DD]		IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
D [auth AD],
LC [auth DD]		IPR002942RNA-binding S4 domainDomain
D [auth AD],
LC [auth DD]		IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
D [auth AD],
LC [auth DD]		IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
D [auth AD],
LC [auth DD]		IPR022801Small ribosomal subunit protein uS4Family
D [auth AD],
LC [auth DD]		IPR005709Small ribosomal subunit protein uS4, bacteriaFamily
E [auth AE],
MC [auth DE]		IPR005712Small ribosomal subunit protein uS5, bacteriaFamily
E [auth AE],
MC [auth DE]		IPR000851Small ribosomal subunit protein uS5Family
E [auth AE],
MC [auth DE]		IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
E [auth AE],
MC [auth DE]		IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
E [auth AE],
MC [auth DE]		IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
E [auth AE],
MC [auth DE]		IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
E [auth AE],
MC [auth DE]		IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
J [auth AJ],
RC [auth DJ]		IPR001848Small ribosomal subunit protein uS10Family
J [auth AJ],
RC [auth DJ]		IPR027486Small ribosomal subunit protein uS10 domainDomain
J [auth AJ],
RC [auth DJ]		IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
J [auth AJ],
RC [auth DJ]		IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
L [auth AL],
TC [auth DL]		IPR006032Small ribosomal subunit protein uS12Family
L [auth AL],
TC [auth DL]		IPR005679Ribosomal protein uS12, bacteriaFamily
L [auth AL],
TC [auth DL]		IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
O [auth AO],
WC [auth DO]		IPR005290Small ribosomal subunit protein uS15, bacteriaFamily
O [auth AO],
WC [auth DO]		IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
O [auth AO],
WC [auth DO]		IPR000589Small ribosomal subunit protein uS15Family
R [auth AR],
ZC [auth DR]		IPR001648Small ribosomal subunit protein bS18Family
R [auth AR],
ZC [auth DR]		IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
R [auth AR],
ZC [auth DR]		IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
DD [auth DV],
V [auth AV]		IPR050057Prokaryotic/Mitochondrial Release FactorFamily
DD [auth DV],
V [auth AV]		IPR004373Peptide chain release factor 1Family
DD [auth DV],
V [auth AV]		IPR000352Peptide chain release factor class IDomain
DD [auth DV],
V [auth AV]		IPR045853Peptide chain release factor class I superfamilyHomologous Superfamily
DD [auth DV],
V [auth AV]		IPR005139Peptide chain release factorDomain
DA [auth BF],
IB [auth CF]		IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
DA [auth BF],
IB [auth CF]		IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
DA [auth BF],
IB [auth CF]		IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
DA [auth BF],
IB [auth CF]		IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
DA [auth BF],
IB [auth CF]		IPR002132Large ribosomal subunit protein uL5Family
DA [auth BF],
IB [auth CF]		IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
HA [auth BJ],
MB [auth CJ]		IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
HA [auth BJ],
MB [auth CJ]		IPR005822Large ribosomal subunit protein uL13Family
HA [auth BJ],
MB [auth CJ]		IPR005823Large ribosomal subunit protein uL13, bacteriaFamily
HA [auth BJ],
MB [auth CJ]		IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
MA [auth BO],
RB [auth CO]		IPR005484Large ribosomal subunit protein uL18, bacterial/plantae/animaliaFamily
MA [auth BO],
RB [auth CO]		IPR004389Large ribosomal subunit protein uL18, bacteriaFamily
PA [auth BR],
UB [auth CR]		IPR028909Large ribosomal subunit protein bL21-likeFamily
PA [auth BR],
UB [auth CR]		IPR001787Large ribosomal subunit protein bL21Family
PA [auth BR],
UB [auth CR]		IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
UA [auth BW],
ZB [auth CW]		IPR001684Large ribosomal subunit protein bL27Family
UA [auth BW],
ZB [auth CW]		IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
BB [auth B4],
GC [auth C4]		IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
BB [auth B4],
GC [auth C4]		IPR000271Large ribosomal subunit protein bL34Family
I [auth AI],
QC [auth DI]		IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
I [auth AI],
QC [auth DI]		IPR023035Small ribosomal subunit protein uS9, bacteria/plastidFamily
I [auth AI],
QC [auth DI]		IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
I [auth AI],
QC [auth DI]		IPR000754Small ribosomal subunit protein uS9Family
I [auth AI],
QC [auth DI]		IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
H [auth AH],
PC [auth DH]		IPR000630Small ribosomal subunit protein uS8Family
H [auth AH],
PC [auth DH]		IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
H [auth AH],
PC [auth DH]		IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
G [auth AG],
OC [auth DG]		IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
G [auth AG],
OC [auth DG]		IPR000235Small ribosomal subunit protein uS7Family
G [auth AG],
OC [auth DG]		IPR005717Small ribosomal subunit protein uS7, bacteria/organellaFamily
G [auth AG],
OC [auth DG]		IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
G [auth AG],
OC [auth DG]		IPR023798Small ribosomal subunit protein uS7 domainDomain
F [auth AF],
NC [auth DF]		IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
F [auth AF],
NC [auth DF]		IPR000529Small ribosomal subunit protein bS6Family
F [auth AF],
NC [auth DF]		IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
F [auth AF],
NC [auth DF]		IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
F [auth AF],
NC [auth DF]		IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
CB [auth B5],
HC [auth C5]		IPR021137Large ribosomal subunit protein bL35-likeFamily
CB [auth B5],
HC [auth C5]		IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
CB [auth B5],
HC [auth C5]		IPR001706Large ribosomal subunit protein bL35Family
CB [auth B5],
HC [auth C5]		IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
AB [auth B3],
FC [auth C3]		IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
AB [auth B3],
FC [auth C3]		IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
AB [auth B3],
FC [auth C3]		IPR001705Large ribosomal subunit protein bL33Family
AB [auth B3],
FC [auth C3]		IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
EC [auth C2],
ZA [auth B2]		IPR002677Large ribosomal subunit protein bL32Family
EC [auth C2],
ZA [auth B2]		IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
EC [auth C2],
ZA [auth B2]		IPR044957Large ribosomal subunit protein bL32, bacteriaFamily
DC [auth C1],
YA [auth B1]		IPR002150Large ribosomal subunit protein bL31 type A/BFamily
DC [auth C1],
YA [auth B1]		IPR027491Large ribosomal subunit protein bL31 type AFamily
DC [auth C1],
YA [auth B1]		IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
DC [auth C1],
YA [auth B1]		IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
CC [auth CZ],
XA [auth BZ]		IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
CC [auth CZ],
XA [auth BZ]		IPR005996Large ribosomal subunit protein uL30, bacteriaFamily
CC [auth CZ],
XA [auth BZ]		IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
CC [auth CZ],
XA [auth BZ]		IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
BC [auth CY],
WA [auth BY]		IPR050063Universal ribosomal protein uL29Family
BC [auth CY],
WA [auth BY]		IPR001854Large ribosomal subunit protein uL29Family
BC [auth CY],
WA [auth BY]		IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
BC [auth CY],
WA [auth BY]		IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
AC [auth CX],
VA [auth BX]		IPR050096Bacterial ribosomal protein bL28Family
AC [auth CX],
VA [auth BX]		IPR001383Large ribosomal subunit protein bL28, bacteriaFamily
AC [auth CX],
VA [auth BX]		IPR026569Large ribosomal subunit protein bL28Family
AC [auth CX],
VA [auth BX]		IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
TA [auth BV],
YB [auth CV]		IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
TA [auth BV],
YB [auth CV]		IPR001021Ribosomal protein bL25, long-formFamily
TA [auth BV],
YB [auth CV]		IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
TA [auth BV],
YB [auth CV]		IPR037121Large ribosomal subunit protein bL25, C-terminalHomologous Superfamily
TA [auth BV],
YB [auth CV]		IPR020057Large ribosomal subunit protein bL25, beta domainDomain
TA [auth BV],
YB [auth CV]		IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
TA [auth BV],
YB [auth CV]		IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
SA [auth BU],
XB [auth CU]		IPR003256Large ribosomal subunit protein uL24Family
SA [auth BU],
XB [auth CU]		IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
SA [auth BU],
XB [auth CU]		IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
SA [auth BU],
XB [auth CU]		IPR005824KOWDomain
SA [auth BU],
XB [auth CU]		IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
SA [auth BU],
XB [auth CU]		IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
RA [auth BT],
WB [auth CT]		IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
RA [auth BT],
WB [auth CT]		IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
RA [auth BT],
WB [auth CT]		IPR013025Large ribosomal subunit protein uL23-likeFamily
QA [auth BS],
VB [auth CS]		IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
QA [auth BS],
VB [auth CS]		IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
QA [auth BS],
VB [auth CS]		IPR001063Large ribosomal subunit protein uL22Family
QA [auth BS],
VB [auth CS]		IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
QA [auth BS],
VB [auth CS]		IPR047867Large ribosomal subunit protein uL22, bacteria/organellaFamily
OA [auth BQ],
TB [auth CQ]		IPR049946Large ribosomal subunit protein bL20, conserved siteConserved Site
OA [auth BQ],
TB [auth CQ]		IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
OA [auth BQ],
TB [auth CQ]		IPR005813Large ribosomal subunit protein bL20Family
NA [auth BP],
SB [auth CP]		IPR001857Large ribosomal subunit protein bL19Family
NA [auth BP],
SB [auth CP]		IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
NA [auth BP],
SB [auth CP]		IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
NA [auth BP],
SB [auth CP]		IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
LA [auth BN],
QB [auth CN]		IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
LA [auth BN],
QB [auth CN]		IPR000456Large ribosomal subunit protein bL17Family
KA [auth BM],
PB [auth CM]		IPR000114Large ribosomal subunit protein uL16, bacteriaFamily
KA [auth BM],
PB [auth CM]		IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
KA [auth BM],
PB [auth CM]		IPR016180Large ribosomal subunit protein uL16 domainDomain
KA [auth BM],
PB [auth CM]		IPR047873Large ribosomal subunit protein uL16Family
JA [auth BL],
OB [auth CL]		IPR021131Large ribosomal subunit protein uL15/eL18Domain
JA [auth BL],
OB [auth CL]		IPR030878Large ribosomal subunit protein uL15Family
JA [auth BL],
OB [auth CL]		IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
JA [auth BL],
OB [auth CL]		IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
JA [auth BL],
OB [auth CL]		IPR005749Large ribosomal subunit protein uL15, bacteriaFamily
IA [auth BK],
NB [auth CK]		IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
IA [auth BK],
NB [auth CK]		IPR000218Large ribosomal subunit protein uL14Family
IA [auth BK],
NB [auth CK]		IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
IA [auth BK],
NB [auth CK]		IPR005745Large ribosomal subunit protein uL14, bacteriaFamily
GA [auth BI],
LB [auth CI]		IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
GA [auth BI],
LB [auth CI]		IPR001790Large ribosomal subunit protein uL10Family
GA [auth BI],
LB [auth CI]		IPR022973Large ribosomal subunit protein uL10, bacteriaFamily
GA [auth BI],
LB [auth CI]		IPR047865Large ribosomal subunit protein uL10, bacteria/organellaFamily
FA [auth BH],
KB [auth CH]		IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
FA [auth BH],
KB [auth CH]		IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
FA [auth BH],
KB [auth CH]		IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
FA [auth BH],
KB [auth CH]		IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
FA [auth BH],
KB [auth CH]		IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
FA [auth BH],
KB [auth CH]		IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
FA [auth BH],
KB [auth CH]		IPR000244Large ribosomal subunit protein bL9Family
EA [auth BG],
JB [auth CG]		IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
EA [auth BG],
JB [auth CG]		IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
EA [auth BG],
JB [auth CG]		IPR000702Large ribosomal subunit protein uL6-likeFamily
EA [auth BG],
JB [auth CG]		IPR019906Large ribosomal subunit protein uL6, bacteriaFamily
C [auth AC],
KC [auth DC]		IPR005704Small ribosomal subunit protein uS3, bacteriaFamily
C [auth AC],
KC [auth DC]		IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
C [auth AC],
KC [auth DC]		IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
C [auth AC],
KC [auth DC]		IPR004087K Homology domainDomain
C [auth AC],
KC [auth DC]		IPR004044K Homology domain, type 2Domain
C [auth AC],
KC [auth DC]		IPR015946K homology domain-like, alpha/betaHomologous Superfamily
C [auth AC],
KC [auth DC]		IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
C [auth AC],
KC [auth DC]		IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
CA [auth BE],
HB [auth CE]		IPR013005Large ribosomal subunit protein uL4-likeFamily
CA [auth BE],
HB [auth CE]		IPR002136Large ribosomal subunit protein uL4Family
CA [auth BE],
HB [auth CE]		IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
BA [auth BD],
GB [auth CD]		IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
BA [auth BD],
GB [auth CD]		IPR019927Large ribosomal subunit protein uL3, bacteria/organellaFamily
BA [auth BD],
GB [auth CD]		IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
BA [auth BD],
GB [auth CD]		IPR000597Large ribosomal subunit protein uL3Family
AA [auth BC],
FB [auth CC]		IPR005880Large ribosomal subunit protein uL2, bacteria/organellaFamily
AA [auth BC],
FB [auth CC]		IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
AA [auth BC],
FB [auth CC]		IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
AA [auth BC],
FB [auth CC]		IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
AA [auth BC],
FB [auth CC]		IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
AA [auth BC],
FB [auth CC]		IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
AA [auth BC],
FB [auth CC]		IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
AA [auth BC],
FB [auth CC]		IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
AA [auth BC],
FB [auth CC]		IPR002171Large ribosomal subunit protein uL2Family
CD [auth DU],
U [auth AU]		IPR030826Small ribosomal subunit protein bTHX/bTHXc/bTHXmFamily
CD [auth DU],
U [auth AU]		IPR031414Small ribosomal subunit protein bTHXFamily
BD [auth DT],
T [auth AT]		IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
BD [auth DT],
T [auth AT]		IPR002583Small ribosomal subunit protein bS20Family
B [auth AB],
JC [auth DB]		IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
B [auth AB],
JC [auth DB]		IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
B [auth AB],
JC [auth DB]		IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
B [auth AB],
JC [auth DB]		IPR001865Small ribosomal subunit protein uS2Family
AD [auth DS],
S [auth AS]		IPR005732Small ribosomal subunit protein uS19, bacteriaFamily
AD [auth DS],
S [auth AS]		IPR002222Small ribosomal subunit protein uS19Family
AD [auth DS],
S [auth AS]		IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
AD [auth DS],
S [auth AS]		IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
Q [auth AQ],
YC [auth DQ]		IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
Q [auth AQ],
YC [auth DQ]		IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
Q [auth AQ],
YC [auth DQ]		IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
Q [auth AQ],
YC [auth DQ]		IPR000266Small ribosomal subunit protein uS17Family
P [auth AP],
XC [auth DP]		IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
P [auth AP],
XC [auth DP]		IPR000307Small ribosomal subunit protein bS16Family
N [auth AN],
VC [auth DN]		IPR023053Small ribosomal subunit protein uS14, bacteriaFamily
N [auth AN],
VC [auth DN]		IPR001209Small ribosomal subunit protein uS14Family
N [auth AN],
VC [auth DN]		IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
N [auth AN],
VC [auth DN]		IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
M [auth AM],
UC [auth DM]		IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
M [auth AM],
UC [auth DM]		IPR001892Small ribosomal subunit protein uS13Family
M [auth AM],
UC [auth DM]		IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
M [auth AM],
UC [auth DM]		IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
M [auth AM],
UC [auth DM]		IPR019980Small ribosomal subunit protein uS13, bacteriaFamily
K [auth AK],
SC [auth DK]		IPR001971Small ribosomal subunit protein uS11Family
K [auth AK],
SC [auth DK]		IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
K [auth AK],
SC [auth DK]		IPR019981Small ribosomal subunit protein uS11, bacteriaFamily
K [auth AK],
SC [auth DK]		IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site