4V7H | pdb_00004v7h

Structure of the 80S rRNA and proteins and P/E tRNA for eukaryotic ribosome based on cryo-EM map of Thermomyces lanuginosus ribosome at 8.9A resolution

External Resource: Annotation

Domain Annotation: ECOD Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
I [auth AJ]	e4v7hAJ1	A: Type III secretion system domain-like	X: Antibiotic binding domain of TipA-like multidrug resistance regulators	H: Antibiotic binding domain of TipA-like multidrug resistance regulators	T: TTL, ATPgrasp_YheCD	F:	ECOD (20:10:01)
H [auth AI]	e4v7hAI1	A: beta-propeller-like	X: beta-propeller	H: Nucleic acid-binding protein	T: Cellulase	F:	ECOD (20:10:01)
G [auth AH]	e4v7hAH1	A: Type III secretion system domain-like	X: Antibiotic binding domain of TipA-like multidrug resistance regulators	H: Antibiotic binding domain of TipA-like multidrug resistance regulators	T: TTL, ATPgrasp_YheCD	F:	ECOD (20:10:01)
F [auth AG]	e4v7hAG1	A: Type III secretion system domain-like	X: Antibiotic binding domain of TipA-like multidrug resistance regulators	H: Antibiotic binding domain of TipA-like multidrug resistance regulators	T: TTL, ATPgrasp_YheCD	F:	ECOD (20:10:01)
XA [auth BZ]	e4v7hBZ1	A: Type III secretion system domain-like	X: Antibiotic binding domain of TipA-like multidrug resistance regulators	H: Antibiotic binding domain of TipA-like multidrug resistance regulators	T: TTL, ATPgrasp_YheCD	F:	ECOD (20:10:01)
E [auth AE]	e4v7hAE1	A: amino-terminal domain of OmpATb	X: amino-terminal domain of OmpATb	H: amino-terminal domain of OmpATb	T: ANF_receptor	F:	ECOD (20:10:01)
WA [auth BY]	e4v7hBY1	A: Type III secretion system domain-like	X: Antibiotic binding domain of TipA-like multidrug resistance regulators	H: Antibiotic binding domain of TipA-like multidrug resistance regulators	T: TTL, ATPgrasp_YheCD	F:	ECOD (20:10:01)
VA [auth BX]	e4v7hBX1	A: Type III secretion system domain-like	X: Antibiotic binding domain of TipA-like multidrug resistance regulators	H: Antibiotic binding domain of TipA-like multidrug resistance regulators	T: TTL, ATPgrasp_YheCD	F:	ECOD (20:10:01)
UA [auth BW]	e4v7hBW1	A: Type III secretion system domain-like	X: Antibiotic binding domain of TipA-like multidrug resistance regulators	H: Antibiotic binding domain of TipA-like multidrug resistance regulators	T: TTL, ATPgrasp_YheCD	F:	ECOD (20:10:01)
TA [auth BV]	e4v7hBV1	A: P-loop domains-like	X: Cas7-related	H: CRISPR-associated protein Cas7f/Csy3	T: CE2_N	F:	ECOD (20:10:01)
SA [auth BU]	e4v7hBU1	A: Type III secretion system domain-like	X: Antibiotic binding domain of TipA-like multidrug resistance regulators	H: Antibiotic binding domain of TipA-like multidrug resistance regulators	T: TTL, ATPgrasp_YheCD	F:	ECOD (20:10:01)
RA [auth BT]	e4v7hBT1	A: Type III secretion system domain-like	X: Antibiotic binding domain of TipA-like multidrug resistance regulators	H: Antibiotic binding domain of TipA-like multidrug resistance regulators	T: TTL, ATPgrasp_YheCD	F:	ECOD (20:10:01)
QA [auth BS]	e4v7hBS1	A: Type III secretion system domain-like	X: Antibiotic binding domain of TipA-like multidrug resistance regulators	H: Antibiotic binding domain of TipA-like multidrug resistance regulators	T: TTL, ATPgrasp_YheCD	F:	ECOD (20:10:01)
PA [auth BR]	e4v7hBR1	A: Type III secretion system domain-like	X: Antibiotic binding domain of TipA-like multidrug resistance regulators	H: Antibiotic binding domain of TipA-like multidrug resistance regulators	T: TTL, ATPgrasp_YheCD	F:	ECOD (20:10:01)
OA [auth BQ]	e4v7hBQ1	A: Type III secretion system domain-like	X: Antibiotic binding domain of TipA-like multidrug resistance regulators	H: Antibiotic binding domain of TipA-like multidrug resistance regulators	T: TTL, ATPgrasp_YheCD	F:	ECOD (20:10:01)
NA [auth BP]	e4v7hBP1	A: Type III secretion system domain-like	X: Antibiotic binding domain of TipA-like multidrug resistance regulators	H: Antibiotic binding domain of TipA-like multidrug resistance regulators	T: TTL, ATPgrasp_YheCD	F:	ECOD (20:10:01)
D [auth AD]	e4v7hAD1	A: Type II ABC importer transmembrane domain fold	X: Type II ABC importer transmembrane domain fold	H: Type II ABC importer transmembrane domain fold	T: KAsynt_C_assoc	F:	ECOD (20:10:01)
MA [auth BO]	e4v7hBO1	A: Type III secretion system domain-like	X: Antibiotic binding domain of TipA-like multidrug resistance regulators	H: Antibiotic binding domain of TipA-like multidrug resistance regulators	T: TTL, ATPgrasp_YheCD	F:	ECOD (20:10:01)
LA [auth BN]	e4v7hBN1	A: Type III secretion system domain-like	X: Antibiotic binding domain of TipA-like multidrug resistance regulators	H: Antibiotic binding domain of TipA-like multidrug resistance regulators	T: TTL, ATPgrasp_YheCD	F:	ECOD (20:10:01)
KA [auth BM]	e4v7hBM1	A: Type III secretion system domain-like	X: Antibiotic binding domain of TipA-like multidrug resistance regulators	H: Antibiotic binding domain of TipA-like multidrug resistance regulators	T: TTL, ATPgrasp_YheCD	F:	ECOD (20:10:01)
JA [auth BL]	e4v7hBL1	A: Type III secretion system domain-like	X: Antibiotic binding domain of TipA-like multidrug resistance regulators	H: Antibiotic binding domain of TipA-like multidrug resistance regulators	T: TTL, ATPgrasp_YheCD	F:	ECOD (20:10:01)
IA [auth BK]	e4v7hBK1	A: Type III secretion system domain-like	X: Antibiotic binding domain of TipA-like multidrug resistance regulators	H: Antibiotic binding domain of TipA-like multidrug resistance regulators	T: TTL, ATPgrasp_YheCD	F:	ECOD (20:10:01)
HA [auth BJ]	e4v7hBJ1	A: Type III secretion system domain-like	X: Antibiotic binding domain of TipA-like multidrug resistance regulators	H: Antibiotic binding domain of TipA-like multidrug resistance regulators	T: TTL, ATPgrasp_YheCD	F:	ECOD (20:10:01)
GA [auth BI]	e4v7hBI1	A: Type III secretion system domain-like	X: Antibiotic binding domain of TipA-like multidrug resistance regulators	H: Antibiotic binding domain of TipA-like multidrug resistance regulators	T: TTL, ATPgrasp_YheCD	F:	ECOD (20:10:01)
FA [auth BH]	e4v7hBH1	A: Type III secretion system domain-like	X: Antibiotic binding domain of TipA-like multidrug resistance regulators	H: Antibiotic binding domain of TipA-like multidrug resistance regulators	T: TTL, ATPgrasp_YheCD	F:	ECOD (20:10:01)
EA [auth BG]	e4v7hBG1	A: Type III secretion system domain-like	X: Antibiotic binding domain of TipA-like multidrug resistance regulators	H: Antibiotic binding domain of TipA-like multidrug resistance regulators	T: TTL, ATPgrasp_YheCD	F:	ECOD (20:10:01)
DA [auth BF]	e4v7hBF1	A: Type III secretion system domain-like	X: Antibiotic binding domain of TipA-like multidrug resistance regulators	H: Antibiotic binding domain of TipA-like multidrug resistance regulators	T: TTL, ATPgrasp_YheCD	F:	ECOD (20:10:01)
C [auth AC]	e4v7hAC1	A: Type III secretion system domain-like	X: Antibiotic binding domain of TipA-like multidrug resistance regulators	H: Antibiotic binding domain of TipA-like multidrug resistance regulators	T: TTL, ATPgrasp_YheCD	F:	ECOD (20:10:01)
CA [auth BE]	e4v7hBE1	A: Type III secretion system domain-like	X: Antibiotic binding domain of TipA-like multidrug resistance regulators	H: Antibiotic binding domain of TipA-like multidrug resistance regulators	T: TTL, ATPgrasp_YheCD	F:	ECOD (20:10:01)
BA [auth BD]	e4v7hBD1	A: Type III secretion system domain-like	X: Antibiotic binding domain of TipA-like multidrug resistance regulators	H: Antibiotic binding domain of TipA-like multidrug resistance regulators	T: TTL, ATPgrasp_YheCD	F:	ECOD (20:10:01)
AA [auth BC]	e4v7hBC1	A: Type III secretion system domain-like	X: Antibiotic binding domain of TipA-like multidrug resistance regulators	H: Antibiotic binding domain of TipA-like multidrug resistance regulators	T: TTL, ATPgrasp_YheCD	F:	ECOD (20:10:01)
Z [auth BB]	e4v7hBB1	A: TIM beta/alpha-barrel	X: TIM barrels	H: TIM barrels	T: AAA_16	F:	ECOD (20:10:01)
Y [auth BA]	e4v7hBA1	A: Type III secretion system domain-like	X: Antibiotic binding domain of TipA-like multidrug resistance regulators	H: Antibiotic binding domain of TipA-like multidrug resistance regulators	T: TTL, ATPgrasp_YheCD	F:	ECOD (20:10:01)
X [auth B9]	e4v7hB91	A: Type III secretion system domain-like	X: Antibiotic binding domain of TipA-like multidrug resistance regulators	H: Antibiotic binding domain of TipA-like multidrug resistance regulators	T: TTL, ATPgrasp_YheCD	F:	ECOD (20:10:01)
W [auth B8]	e4v7hB81	A: Type II ABC importer transmembrane domain fold	X: Type II ABC importer transmembrane domain fold	H: Type II ABC importer transmembrane domain fold	T: KAsynt_C_assoc	F:	ECOD (20:10:01)
V [auth B2]	e4v7hB21	A: Type III secretion system domain-like	X: Antibiotic binding domain of TipA-like multidrug resistance regulators	H: Antibiotic binding domain of TipA-like multidrug resistance regulators	T: TTL, ATPgrasp_YheCD	F:	ECOD (20:10:01)
U [auth B1]	e4v7hB11	A: Type III secretion system domain-like	X: Antibiotic binding domain of TipA-like multidrug resistance regulators	H: Antibiotic binding domain of TipA-like multidrug resistance regulators	T: TTL, ATPgrasp_YheCD	F:	ECOD (20:10:01)
T [auth B0]	e4v7hB01	A: Type III secretion system domain-like	X: Antibiotic binding domain of TipA-like multidrug resistance regulators	H: Antibiotic binding domain of TipA-like multidrug resistance regulators	T: TTL, ATPgrasp_YheCD	F:	ECOD (20:10:01)
B [auth AB]	e4v7hAB1	A: Immunoglobulin-like beta-sandwich	X: Immunoglobulin-related	H: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	T: FlaF_Ig-like	F:	ECOD (20:10:01)
R [auth AT]	e4v7hAT1	A: Type III secretion system domain-like	X: Antibiotic binding domain of TipA-like multidrug resistance regulators	H: Antibiotic binding domain of TipA-like multidrug resistance regulators	T: TTL, ATPgrasp_YheCD	F:	ECOD (20:10:01)
Q [auth AR]	e4v7hAR1	A: Type III secretion system domain-like	X: Antibiotic binding domain of TipA-like multidrug resistance regulators	H: Antibiotic binding domain of TipA-like multidrug resistance regulators	T: TTL, ATPgrasp_YheCD	F:	ECOD (20:10:01)
P [auth AS]	e4v7hAS1	A: beta-propeller-like	X: beta-propeller	H: PERK and Ire1 luminal domains	T:	F:	ECOD (20:10:01)
O [auth AQ]	e4v7hAQ1	A: beta-propeller-like	X: beta-propeller	H: Nucleic acid-binding protein	T: Cellulase	F:	ECOD (20:10:01)
N [auth AO]	e4v7hAO1	A: jelly-roll	X: Double-stranded beta-helix	H: Double-stranded beta-helix	T: Molybdopterin	F:	ECOD (20:10:01)
M [auth AN]	e4v7hAN1	A: Type III secretion system domain-like	X: Antibiotic binding domain of TipA-like multidrug resistance regulators	H: Antibiotic binding domain of TipA-like multidrug resistance regulators	T: TTL, ATPgrasp_YheCD	F:	ECOD (20:10:01)
L [auth AM]	e4v7hAM1	A: beta-propeller-like	X: beta-propeller	H: Nucleic acid-binding protein	T: Cellulase	F:	ECOD (20:10:01)
K [auth AL]	e4v7hAL1	A: Type III secretion system domain-like	X: Antibiotic binding domain of TipA-like multidrug resistance regulators	H: Antibiotic binding domain of TipA-like multidrug resistance regulators	T: TTL, ATPgrasp_YheCD	F:	ECOD (20:10:01)
J [auth AK]	e4v7hAK1	A: Type III secretion system domain-like	X: Antibiotic binding domain of TipA-like multidrug resistance regulators	H: Antibiotic binding domain of TipA-like multidrug resistance regulators	T: TTL, ATPgrasp_YheCD	F:	ECOD (20:10:01)

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

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.id_divider{ color: #ccc; padding: 0 10px 0 10px; } .extended_id_info{ color: #ccc; font-size: 18px; position: relative; top: -10px; left: 4px; } 4V7H | pdb_00004v7h

Structure of the 80S rRNA and proteins and P/E tRNA for eukaryotic ribosome based on cryo-EM map of Thermomyces lanuginosus ribosome at 8.9A resolution

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

4V7H | pdb_00004v7h