4V4Y

Crystal structure of the 70S Thermus thermophilus ribosome with translocated and rotated Shine-Dalgarno Duplex.


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
M [auth AL]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like8037678 3000100 SCOP2B (2022-06-29)
N [auth AM]SCOP2B SuperfamilyRibosomal protein S108044019 3001336 SCOP2B (2022-06-29)
O [auth AN]SCOP2B SuperfamilyTranslational machinery components8044020 3000571 SCOP2B (2022-06-29)
P [auth AO]SCOP2B SuperfamilyNucleic acid-binding proteins8044021 3000135 SCOP2B (2022-06-29)
Q [auth AP]SCOP2B SuperfamilyS13-like H2TH domain8003708 3000053 SCOP2B (2022-06-29)
R [auth AQ]SCOP2 FamilyRibosomal protein S14p/S29e8047579 4003647 SCOP2 (2022-06-29)
R [auth AQ]SCOP2 SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8052585 3000068 SCOP2 (2022-06-29)
T [auth AS]SCOP2B SuperfamilyRibosomal protein S168044025 3000680 SCOP2B (2022-06-29)
U [auth AT]SCOP2B SuperfamilyNucleic acid-binding proteins8101533 3000135 SCOP2B (2022-06-29)
V [auth AU]SCOP2B SuperfamilyRibosomal protein S188101581 3001191 SCOP2B (2022-06-29)
W [auth AV]SCOP2B SuperfamilyRibosomal protein S198044027 3000686 SCOP2B (2022-06-29)
X [auth AW]SCOP2B SuperfamilyRibosomal protein S208044029 3001362 SCOP2B (2022-06-29)
BA [auth BC]SCOP2B SuperfamilyRibosomal protein L1p/L10e-like8037625 3001911 SCOP2B (2022-06-29)
CA [auth BD]SCOP2B SuperfamilyNucleic acid-binding proteins8033195 3000135 SCOP2B (2022-06-29)
CA [auth BD]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8033194 3000334 SCOP2B (2022-06-29)
DA [auth BE]SCOP2B SuperfamilyTranslational proteins8033197 3000811 SCOP2B (2022-06-29)
EA [auth BF]SCOP2B SuperfamilyRibosomal protein L48033198 3001146 SCOP2B (2022-06-29)
GA [auth BH]SCOP2B SuperfamilyRibosomal protein L68033203 3000724 SCOP2B (2022-06-29)
GA [auth BH]SCOP2B SuperfamilyRibosomal protein L68033202 3000724 SCOP2B (2022-06-29)
JA [auth BM]SCOP2B SuperfamilyRibosomal protein L138033205 3001134 SCOP2B (2022-06-29)
LA [auth BO]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8033207 3001045 SCOP2B (2022-06-29)
MA [auth BP]SCOP2B SuperfamilyRibosomal protein L16p/L10e8043627 3000884 SCOP2B (2022-06-29)
NA [auth BQ]SCOP2B SuperfamilyProkaryotic ribosomal protein L178032744 3000995 SCOP2B (2022-06-29)
OA [auth BR]SCOP2B SuperfamilyTranslational machinery components8033211 3000571 SCOP2B (2022-06-29)
F [auth AE]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like8044010 3001397 SCOP2B (2022-06-29)
PA [auth BS]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8033214 3000334 SCOP2B (2022-06-29)
QA [auth BT]SCOP2B SuperfamilyRibosomal protein L208033216 3000563 SCOP2B (2022-06-29)
RA [auth BU]SCOP2B Superfamilyl21p-like8033218 3002005 SCOP2B (2022-06-29)
SA [auth BV]SCOP2B SuperfamilyRibosomal protein L228033220 3001078 SCOP2B (2022-06-29)
TA [auth BW]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8033219 3000210 SCOP2B (2022-06-29)
UA [auth BX]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8033223 3000334 SCOP2B (2022-06-29)
WA [auth BZ]SCOP2B SuperfamilyRibosomal L27 protein-like8041210 3000539 SCOP2B (2022-06-29)
XA [auth B1]SCOP2B SuperfamilyRibosomal protein L29 (L29p)8076742 3000713 SCOP2B (2022-06-29)
G [auth AF]SCOP2B SuperfamilyRibosomal protein S3 C-terminal domain8044012 3001053 SCOP2B (2022-06-29)
G [auth AF]SCOP2B SuperfamilyProkaryotic type KH domain (KH-domain type II)8044011 3001043 SCOP2B (2022-06-29)
ZA [auth B3]SCOP2B SuperfamilyL28p-like8033189 3001966 SCOP2B (2022-06-29)
AB [auth B4]SCOP2B SuperfamilyZn-binding ribosomal proteins8033190 3001320 SCOP2B (2022-06-29)
BB [auth B5]SCOP2B SuperfamilyZn-binding ribosomal proteins8033191 3001320 SCOP2B (2022-06-29)
DB [auth B7]SCOP2B SuperfamilyL35p-like8033192 3000790 SCOP2B (2022-06-29)
H [auth AG]SCOP2B SuperfamilyAlpha-L RNA-binding motif8044014 3001473 SCOP2B (2022-06-29)
I [auth AH]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like8044015 3000100 SCOP2B (2022-06-29)
I [auth AH]SCOP2B SuperfamilydsRNA-binding domain-like8044017 3000985 SCOP2B (2022-06-29)
K [auth AJ]SCOP2B SuperfamilyRibosomal protein S78033523 3000799 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
L [auth AK]Ribosomal_S8_Ne4v4yAK1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_NECOD (1.6)
L [auth AK]Ribosomal_S8_Ce4v4yAK2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_CECOD (1.6)
M [auth AL]Ribosomal_S9e4v4yAL1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
N [auth AM]Ribosomal_S10e4v4yAM1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10ECOD (1.6)
O [auth AN]Ribosomal_S11e4v4yAN1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
P [auth AO]Ribosom_S12_S23e4v4yAO1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
Q [auth AP]Ribosomal_S13_1e4v4yAP1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13_1ECOD (1.6)
R [auth AQ]Ribosomal_S14e4v4yAQ1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14ECOD (1.6)
S [auth AR]Ribosomal_S15_1e4v4yAR1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
T [auth AS]Ribosomal_S16_1e4v4yAS1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16_1ECOD (1.6)
U [auth AT]Ribosomal_S17_1e4v4yAT1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
V [auth AU]Ribosomal_S18e4v4yAU1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
W [auth AV]Ribosomal_S19e4v4yAV1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
X [auth AW]Ribosomal_S20pe4v4yAW1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: Ribosomal_S20pECOD (1.6)
BA [auth BC]Ribosomal_L1_2nd_1e4v4yBC1 A: a+b two layersX: a+b domain in Ribosomal protein L1 (From Topology)H: a+b domain in Ribosomal protein L1 (From Topology)T: a+b domain in Ribosomal protein L1F: Ribosomal_L1_2nd_1ECOD (1.6)
BA [auth BC]Ribosomal_L1_1ste4v4yBC2 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Rossmann-like domain in Ribosomal protein L1 (From Topology)T: Rossmann-like domain in Ribosomal protein L1F: Ribosomal_L1_1stECOD (1.6)
CA [auth BD]Ribosomal_L2_1e4v4yBD2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
CA [auth BD]Ribosomal_L2_Ce4v4yBD1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
DA [auth BE]Ribosomal_L3e4v4yBE1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
EA [auth BF]Ribosomal_L4e4v4yBF1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
FA [auth BG]Ribosomal_L5_Ce4v4yBG1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
GA [auth BH]Ribosomal_L6e4v4yBH1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
GA [auth BH]Ribosomal_L6_1e4v4yBH2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_1ECOD (1.6)
HA [auth BK]Ribosomal_L9_Ne4v4yBK2 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: Ribosomal_L9_NECOD (1.6)
HA [auth BK]Ribosomal_L9_Ce4v4yBK1 A: a+b two layersX: Ribosomal protein L9 C-domain (From Topology)H: Ribosomal protein L9 C-domain (From Topology)T: Ribosomal protein L9 C-domainF: Ribosomal_L9_CECOD (1.6)
IA [auth BL]Ribosomal_L11e4v4yBL2 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: Ribosomal_L11ECOD (1.6)
IA [auth BL]Ribosomal_L11_Ne4v4yBL1 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: Ribosomal_L11_NECOD (1.6)
JA [auth BM]Ribosomal_L13e4v4yBM1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
KA [auth BN]Ribosomal_L14e4v4yBN1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
LA [auth BO]Ribosomal_L27Ae4v4yBO1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
MA [auth BP]Ribosomal_L16e4v4yBP1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
NA [auth BQ]Ribosomal_L17_1e4v4yBQ1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17_1ECOD (1.6)
OA [auth BR]Ribosomal_L18pe4v4yBR1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
F [auth AE]Ribosomal_S2e4v4yAE1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2ECOD (1.6)
PA [auth BS]Ribosomal_L19e4v4yBS1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
QA [auth BT]Ribosomal_L20e4v4yBT1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
RA [auth BU]Ribosomal_L21pe4v4yBU1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
SA [auth BV]Ribosomal_L22e4v4yBV1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
TA [auth BW]Ribosomal_L23_2e4v4yBW1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
UA [auth BX]ribosomal_L24e4v4yBX1 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24ECOD (1.6)
VA [auth BY]Ribosomal_L25pe4v4yBY2 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_L25pECOD (1.6)
VA [auth BY]Ribosomal_TL5_Ce4v4yBY1 A: a+b complex topologyX: Ribosomal protein TL5/L25 C-terminal domain-likeH: Ribosomal protein TL5/L25 C-terminal domain-related (From Topology)T: Ribosomal protein TL5/L25 C-terminal domain-relatedF: Ribosomal_TL5_CECOD (1.6)
WA [auth BZ]Ribosomal_L27e4v4yBZ1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
XA [auth B1]Ribosomal_L29e4v4yB11 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29ECOD (1.6)
YA [auth B2]Ribosomal_L30e4v4yB21 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
G [auth AF]Ribosomal_S3_Ce4v4yAF1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
G [auth AF]KH_2_1e4v4yAF2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_1ECOD (1.6)
ZA [auth B3]Ribosomal_L31e4v4yB31 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: Ribosomal_L31ECOD (1.6)
AB [auth B4]Ribosomal_L32pe4v4yB41 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L32pECOD (1.6)
BB [auth B5]Ribosomal_L33e4v4yB51 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
CB [auth B6]Ribosomal_L34e4v4yB61 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34ECOD (1.6)
DB [auth B7]Ribosomal_L35pe4v4yB71 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
EB [auth B8]Ribosomal_L36e4v4yB81 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: Ribosomal_L36ECOD (1.6)
H [auth AG]S4e4v4yAG1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
I [auth AH]Ribosomal_S5_Ce4v4yAH1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
I [auth AH]Ribosomal_S5e4v4yAH2 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5ECOD (1.6)
J [auth AI]Ribosomal_S6e4v4yAI1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6ECOD (1.6)
K [auth AJ]Ribosomal_S7_1e4v4yAJ1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
L [auth AK]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
M [auth AL]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
N [auth AM]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
O [auth AN]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
P [auth AO]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
Q [auth AP]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
R [auth AQ]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
S [auth AR]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
T [auth AS]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
U [auth AT]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
V [auth AU]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
W [auth AV]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
X [auth AW]PF01649Ribosomal protein S20 (Ribosomal_S20p)Ribosomal protein S20- Family
Y [auth AX]PF1707030S ribosomal protein Thx (Thx)30S ribosomal protein Thx- Family
BA [auth BC]PF00687Ribosomal protein L1p/L10e family (Ribosomal_L1)Ribosomal protein L1p/L10e familyThis family includes prokaryotic L1 and eukaryotic L10.Domain
CA [auth BD]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
CA [auth BD]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
DA [auth BE]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
EA [auth BF]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
FA [auth BG]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
FA [auth BG]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
GA [auth BH]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
HA [auth BK]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domain- Domain
HA [auth BK]PF03948Ribosomal protein L9, C-terminal domain (Ribosomal_L9_C)Ribosomal protein L9, C-terminal domain- Domain
IA [auth BL]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.Domain
IA [auth BL]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domain- Domain
JA [auth BM]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
KA [auth BN]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
LA [auth BO]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
MA [auth BP]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
NA [auth BQ]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
OA [auth BR]PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
F [auth AE]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
PA [auth BS]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
QA [auth BT]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
RA [auth BU]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
SA [auth BV]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
TA [auth BW]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
UA [auth BX]PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
UA [auth BX]PF00467KOW motif (KOW)KOW motif- Family
VA [auth BY]PF14693Ribosomal protein TL5, C-terminal domain (Ribosomal_TL5_C)Ribosomal protein TL5, C-terminal domainThis family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC pr ...This family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC proteins. TL5 or CTC are not found in Eukarya or Archaea. In some Bacteria, including E. coli, this ribosomal subunit occurs as a single domain protein (named Ribosomal subunit L25), where the only domain is homologous to TL5 N-terminal domain (hence included in family Pfam:PF01386). The function of the C-terminal domain of TLC is at present unknown.
Domain
VA [auth BY]PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress.Domain
WA [auth BZ]PF01016Ribosomal L27 protein (Ribosomal_L27)Ribosomal L27 protein- Family
XA [auth B1]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
YA [auth B2]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
G [auth AF]PF07650KH domain (KH_2)KH domain- Domain
G [auth AF]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
ZA [auth B3]PF01197Ribosomal protein L31 (Ribosomal_L31)Ribosomal protein L31- Family
AB [auth B4]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
BB [auth B5]PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
CB [auth B6]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
DB [auth B7]PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
EB [auth B8]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36- Domain
H [auth AG]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
H [auth AG]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
I [auth AH]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
I [auth AH]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
J [auth AI]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6- Domain
K [auth AJ]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth AA]16S ribosomal RNA---
L [auth AK]30S ribosomal protein S8
M [auth AL]30S ribosomal protein S9
N [auth AM]30S ribosomal protein S10
O [auth AN]30S ribosomal protein S11
P [auth AO]30S ribosomal protein S12
Q [auth AP]30S ribosomal protein S13
R [auth AQ]30S ribosomal protein S14
S [auth AR]30S ribosomal protein S15
T [auth AS]30S ribosomal protein S16
U [auth AT]30S ribosomal protein S17
B [auth A1]mRNA---
V [auth AU]30S ribosomal protein S18
W [auth AV]30S ribosomal protein S19
X [auth AW]30S ribosomal protein S20
Y [auth AX]30S ribosomal protein Thx -
Z [auth BA]23S ribosomal RNA---
AA [auth BB]5S ribosomal RNA---
BA [auth BC]50S ribosomal protein L1
CA [auth BD]50S ribosomal protein L2
DA [auth BE]50S ribosomal protein L3
EA [auth BF]50S ribosomal protein L4
C [auth AC],
D [auth AD],
E [auth AB]
tRNA PHE (unmodified bases)---
FA [auth BG]50S ribosomal protein L5
GA [auth BH]50S ribosomal protein L6
HA [auth BK]50S ribosomal protein L9
IA [auth BL]50S ribosomal protein L11
JA [auth BM]50S ribosomal protein L13
KA [auth BN]50S ribosomal protein L14
LA [auth BO]50S ribosomal protein L15
MA [auth BP]50S ribosomal protein L16
NA [auth BQ]50S ribosomal protein L17
OA [auth BR]50S ribosomal protein L18
F [auth AE]30S ribosomal protein S2
PA [auth BS]50S ribosomal protein L19
QA [auth BT]50S ribosomal protein L20
RA [auth BU]50S ribosomal protein L21
SA [auth BV]50S ribosomal protein L22
TA [auth BW]50S ribosomal protein L23
UA [auth BX]50S ribosomal protein L24
VA [auth BY]50S ribosomal protein L25
WA [auth BZ]Ribosomal protein L27
XA [auth B1]50S ribosomal protein L29
YA [auth B2]50S ribosomal protein L30
G [auth AF]30S ribosomal protein S3
ZA [auth B3]50S ribosomal protein L31
AB [auth B4]50S ribosomal protein L32
BB [auth B5]50S ribosomal protein L33
CB [auth B6]50S ribosomal protein L34
DB [auth B7]50S ribosomal protein L35
EB [auth B8]50S ribosomal protein L36
H [auth AG]30S ribosomal protein S4
I [auth AH]30S ribosomal protein S5
J [auth AI]30S ribosomal protein S6
K [auth AJ]30S ribosomal protein S7

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
L [auth AK]IPR000630Small ribosomal subunit protein uS8Family
L [auth AK]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
L [auth AK]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
M [auth AL]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
M [auth AL]IPR023035Small ribosomal subunit protein uS9, bacterial/plastidFamily
M [auth AL]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
M [auth AL]IPR000754Small ribosomal subunit protein uS9Family
M [auth AL]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
N [auth AM]IPR001848Small ribosomal subunit protein uS10Family
N [auth AM]IPR027486Small ribosomal subunit protein uS10 domainDomain
N [auth AM]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
N [auth AM]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
O [auth AN]IPR001971Small ribosomal subunit protein uS11Family
O [auth AN]IPR019981Small ribosomal subunit protein uS11, bacterial-typeFamily
O [auth AN]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
O [auth AN]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
P [auth AO]IPR006032Small ribosomal subunit protein uS12Family
P [auth AO]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
P [auth AO]IPR005679Ribosomal protein uS12, bacterial-typeFamily
Q [auth AP]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
Q [auth AP]IPR001892Small ribosomal subunit protein uS13Family
Q [auth AP]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
Q [auth AP]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
Q [auth AP]IPR019980Small ribosomal subunit protein uS13, bacterial-typeFamily
R [auth AQ]IPR023053Small ribosomal subunit protein uS14, bacteriaFamily
R [auth AQ]IPR001209Small ribosomal subunit protein uS14Family
R [auth AQ]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
R [auth AQ]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
S [auth AR]IPR005290Small ribosomal subunit protein uS15, bacterial-typeFamily
S [auth AR]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
S [auth AR]IPR000589Small ribosomal subunit protein uS15Family
T [auth AS]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
T [auth AS]IPR000307Small ribosomal subunit protein bS16Family
U [auth AT]IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
U [auth AT]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
U [auth AT]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
U [auth AT]IPR000266Small ribosomal subunit protein uS17Family
V [auth AU]IPR001648Small ribosomal subunit protein bS18Family
V [auth AU]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
V [auth AU]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
W [auth AV]IPR002222Small ribosomal subunit protein uS19Family
W [auth AV]IPR005732Small ribosomal subunit protein uS19, bacterial-typeFamily
W [auth AV]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
W [auth AV]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
X [auth AW]IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
X [auth AW]IPR002583Small ribosomal subunit protein bS20Family
Y [auth AX]IPR030826Small ribosomal subunit protein bTHX/bTHXc/bTHXmFamily
Y [auth AX]IPR031414Small ribosomal subunit protein bTHXFamily
BA [auth BC]IPR023673Large ribosomal subunit protein uL1, conserved siteConserved Site
BA [auth BC]IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
BA [auth BC]IPR005878Large ribosomal subunit protein uL1, bacterial-typeFamily
BA [auth BC]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
BA [auth BC]IPR002143Large ribosomal subunit protein uL1Family
BA [auth BC]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
CA [auth BD]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
CA [auth BD]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
CA [auth BD]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
CA [auth BD]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
CA [auth BD]IPR005880Large ribosomal subunit protein uL2, bacterial/organellar-typeFamily
CA [auth BD]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
CA [auth BD]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
CA [auth BD]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
CA [auth BD]IPR002171Large ribosomal subunit protein uL2Family
DA [auth BE]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
DA [auth BE]IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
DA [auth BE]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
DA [auth BE]IPR000597Large ribosomal subunit protein uL3Family
EA [auth BF]IPR013005Large ribosomal subunit protein uL4-likeFamily
EA [auth BF]IPR002136Large ribosomal subunit protein uL4Family
EA [auth BF]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
FA [auth BG]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
FA [auth BG]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
FA [auth BG]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
FA [auth BG]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
FA [auth BG]IPR020930Large ribosomal subunit protein uL5, bacterial-typeFamily
FA [auth BG]IPR002132Large ribosomal subunit protein uL5Family
GA [auth BH]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
GA [auth BH]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
GA [auth BH]IPR000702Large ribosomal subunit protein uL6-likeFamily
GA [auth BH]IPR019906Large ribosomal subunit protein uL6, bacterial-typeFamily
HA [auth BK]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
HA [auth BK]IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
HA [auth BK]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
HA [auth BK]IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
HA [auth BK]IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
HA [auth BK]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
HA [auth BK]IPR000244Large ribosomal subunit protein bL9Family
IA [auth BL]IPR020785Large ribosomal subunit protein uL11, conserved siteConserved Site
IA [auth BL]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
IA [auth BL]IPR000911Ribosomal protein uL11Family
IA [auth BL]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
IA [auth BL]IPR006519Large ribosomal subunit protein uL11, bacterial-typeFamily
IA [auth BL]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
IA [auth BL]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
JA [auth BM]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
JA [auth BM]IPR005822Large ribosomal subunit protein uL13Family
JA [auth BM]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
JA [auth BM]IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
KA [auth BN]IPR005745Large ribosomal subunit protein uL14, bacterial-typeFamily
KA [auth BN]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
KA [auth BN]IPR000218Large ribosomal subunit protein uL14Family
KA [auth BN]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
LA [auth BO]IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
LA [auth BO]IPR021131Large ribosomal subunit protein uL15/eL18Domain
LA [auth BO]IPR030878Large ribosomal subunit protein uL15Family
LA [auth BO]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
LA [auth BO]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
MA [auth BP]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
MA [auth BP]IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
MA [auth BP]IPR016180Large ribosomal subunit protein uL16 domainDomain
MA [auth BP]IPR047873Large ribosomal subunit protein uL16Family
NA [auth BQ]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
NA [auth BQ]IPR000456Large ribosomal subunit protein bL17Family
OA [auth BR]IPR005484Large ribosomal subunit protein uL18Family
OA [auth BR]IPR004389Large ribosomal subunit protein uL18, bacterial-typeFamily
F [auth AE]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
F [auth AE]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
F [auth AE]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
F [auth AE]IPR001865Small ribosomal subunit protein uS2Family
PA [auth BS]IPR001857Large ribosomal subunit protein bL19Family
PA [auth BS]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
PA [auth BS]IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
PA [auth BS]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
QA [auth BT]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
QA [auth BT]IPR005813Large ribosomal subunit protein bL20Family
RA [auth BU]IPR028909Large ribosomal subunit protein bL21-likeFamily
RA [auth BU]IPR001787Large ribosomal subunit protein bL21Family
RA [auth BU]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
SA [auth BV]IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
SA [auth BV]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
SA [auth BV]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
SA [auth BV]IPR001063Large ribosomal subunit protein uL22Family
SA [auth BV]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
TA [auth BW]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
TA [auth BW]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
TA [auth BW]IPR013025Large ribosomal subunit protein uL23-likeFamily
UA [auth BX]IPR003256Large ribosomal subunit protein uL24Family
UA [auth BX]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
UA [auth BX]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
UA [auth BX]IPR005824KOWDomain
UA [auth BX]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
UA [auth BX]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
VA [auth BY]IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
VA [auth BY]IPR001021Ribosomal protein bL25, long-formFamily
VA [auth BY]IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
VA [auth BY]IPR037121Large ribosomal subunit protein bL25, C-terminalHomologous Superfamily
VA [auth BY]IPR020057Large ribosomal subunit protein bL25, beta domainDomain
VA [auth BY]IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
WA [auth BZ]IPR001684Large ribosomal subunit protein bL27Family
WA [auth BZ]IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
XA [auth B1]IPR001854Large ribosomal subunit protein uL29Family
XA [auth B1]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
XA [auth B1]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
YA [auth B2]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
YA [auth B2]IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
YA [auth B2]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
YA [auth B2]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
G [auth AF]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
G [auth AF]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
G [auth AF]IPR004087K Homology domainDomain
G [auth AF]IPR004044K Homology domain, type 2Domain
G [auth AF]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
G [auth AF]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
G [auth AF]IPR005704Small ribosomal subunit protein uS3, bacterial-typeFamily
G [auth AF]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
ZA [auth B3]IPR002150Large ribosomal subunit protein bL31 type A/BFamily
ZA [auth B3]IPR027491Large ribosomal subunit protein bL31 type AFamily
ZA [auth B3]IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
ZA [auth B3]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
AB [auth B4]IPR002677Large ribosomal subunit protein bL32Family
AB [auth B4]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
AB [auth B4]IPR044957Large ribosomal subunit protein bL32, bacterial typeFamily
BB [auth B5]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
BB [auth B5]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
BB [auth B5]IPR001705Large ribosomal subunit protein bL33Family
BB [auth B5]IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
CB [auth B6]IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
CB [auth B6]IPR000271Large ribosomal subunit protein bL34Family
DB [auth B7]IPR021137Large ribosomal subunit protein bL35-likeFamily
DB [auth B7]IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
DB [auth B7]IPR001706Large ribosomal subunit protein bL35Family
DB [auth B7]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
EB [auth B8]IPR000473Large ribosomal subunit protein bL36Family
EB [auth B8]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
H [auth AG]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
H [auth AG]IPR002942RNA-binding S4 domainDomain
H [auth AG]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
H [auth AG]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
H [auth AG]IPR005709Small ribosomal subunit protein uS4, bacterial-typeFamily
H [auth AG]IPR022801Small ribosomal subunit protein uS4Family
I [auth AH]IPR000851Small ribosomal subunit protein uS5Family
I [auth AH]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
I [auth AH]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
I [auth AH]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
I [auth AH]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
I [auth AH]IPR005712Small ribosomal subunit protein uS5, bacterial-typeFamily
I [auth AH]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
J [auth AI]IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
J [auth AI]IPR000529Small ribosomal subunit protein bS6Family
J [auth AI]IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
J [auth AI]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
J [auth AI]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
K [auth AJ]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
K [auth AJ]IPR000235Small ribosomal subunit protein uS7Family
K [auth AJ]IPR005717Small ribosomal subunit protein uS7, bacterial/organellar-typeFamily
K [auth AJ]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
K [auth AJ]IPR023798Small ribosomal subunit protein uS7 domainDomain