4UD0 | pdb_00004ud0

X-ray structure and activities of an essential Mononegavirales L- protein domain

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth B]	paramyx_RNAcap	e4ud0B2	A: alpha complex topology	X: Vesicular stomatitis virus L polymerase C-terminal domain (From Topology)	H: Vesicular stomatitis virus L polymerase C-terminal domain (From Topology)	T: Vesicular stomatitis virus L polymerase C-terminal domain	F: paramyx_RNAcap	ECOD (1.6)
A [auth B]	Methyltrans_Mon_2nd_1	e4ud0B1	A: a/b three-layered sandwiches	X: Rossmann-like	H: Rossmann-related	T: S-adenosyl-L-methionine-dependent methyltransferases	F: Methyltrans_Mon_2nd_1	ECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth B]	RNA-DIRECTED RNA POLYMERASE L	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding RNA methyltransferase activity catalytic activity, acting on RNA transferase activity, transferring one-carbon groups catalytic activity, acting on a nucleic acid transferase activity S-adenosylmethionine-dependent methyltransferase activity mRNA 5'-cap (guanine-N7-)-methyltransferase activity N-methyltransferase activity methyltransferase activity catalytic activity mRNA methyltransferase activity RNA-directed RNA polymerase activity 5'-3' RNA polymerase activity RNA polymerase activity nucleotidyltransferase activity transferase activity, transferring phosphorus-containing groups hydrolase activity guanyl nucleotide binding GTP binding guanyl ribonucleotide binding cation binding metal ion binding	-	virion component host cellular component host intracellular part cellular anatomical structure host cell cytoplasm host cell part host intracellular region other organism part

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth B]	IPR014023	Mononegavirales RNA-directed RNA polymerase catalytic domain	Domain
A [auth B]	IPR025786	Mononegavirus L protein 2-O-ribose methyltransferase	Domain
A [auth B]	IPR026890	Mononegavirales mRNA-capping domain V	Domain
A [auth B]	IPR039736	RNA-directed RNA polymerase L, C-terminal	Domain
A [auth B]	IPR039530	RNA-directed RNA polymerase L methyltransferase domain, rhabdovirus	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.