4U8E | pdb_00004u8e

Crystal structure of 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase from Streptococcus agalactiae

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyRibose/Galactose isomerase RpiB/AlsB 8053338 3000383 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ARibosomal_L30,Ribosomal_L30_Ne4u8eA1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Ribosomal_L30,Ribosomal_L30_NECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.40.1400.10 Alpha Beta 3-Layer(aba) Sandwich Ribose 5-phosphate Isomerase B Chain: A,CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Putative uncharacterized protein gbs1892 -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR022133Ribose-5-phosphate isomerase, C-terminalDomain
IPR036569Sugar-phosphate isomerase, RpiB/LacA/LacB superfamilyHomologous Superfamily
IPR003500Sugar-phosphate isomerase, RpiB/LacA/LacB familyFamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
CSD Parent Component: CYS

RESID:  AA0262

PSI-MOD :  L-cysteine sulfinic acid MOD:00267