4U7B
Crystal structure of a pre-cleavage Mos1 transpososome
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
G [auth A] | PF13412 | e4u7bA3 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF13412 | ECOD (1.6) |
G [auth A] | PF17906 | e4u7bA1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF17906 | ECOD (1.6) |
G [auth A] | PF01359 | e4u7bA2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF01359 | ECOD (1.6) |
H [auth B] | PF13412 | e4u7bB3 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF13412 | ECOD (1.6) |
H [auth B] | PF17906 | e4u7bB1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF17906 | ECOD (1.6) |
H [auth B] | PF01359 | e4u7bB2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF01359 | ECOD (1.6) |
I [auth G] | PF13412 | e4u7bG3 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF13412 | ECOD (1.6) |
I [auth G] | PF17906 | e4u7bG2 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF17906 | ECOD (1.6) |
I [auth G] | PF01359 | e4u7bG1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF01359 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
G [auth A], H [auth B], I [auth G] | PF17906 | HTH domain in Mos1 transposase (HTH_48) | HTH domain in Mos1 transposase | The N-terminal domain of the Mos1 Mariner transposase comprises two HTH domains [1]. This HTH domain binds in the DNA major groove to the transposons inverted repeats. | Domain |
G [auth A], H [auth B], I [auth G] | PF01359 | Transposase (partial DDE domain) (Transposase_1) | Transposase (partial DDE domain) | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A [auth C], C [auth E], E [auth H] | DNA (25-MER) | - | - | - |
B [auth D], D [auth F], F [auth I] | DNA (31-MER) | - | - | - |
G [auth A], H [auth B], I [auth G] | Mariner Mos1 transposase |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
G [auth A], H [auth B], I [auth G] | IPR036397 | Ribonuclease H superfamily | Homologous Superfamily |
G [auth A], H [auth B], I [auth G] | IPR041426 | Mos1 transposase, HTH domain | Domain |
G [auth A], H [auth B], I [auth G] | IPR001888 | Transposase, type 1 | Family |
G [auth A], H [auth B], I [auth G] | IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily |
G [auth A], H [auth B], I [auth G] | IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily |