4TQ6 | pdb_00004tq6

Structure of a UbiA homolog from Archaeoglobus fulgidus bound to Cd2+

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BRNase_Te4tq6B1 A: a/b three-layered sandwichesX: alpha/beta-HydrolasesH: alpha/beta-HydrolasesT: alpha/beta-HydrolasesF: RNase_TECOD (v294.1)
ARNase_Te4tq6A1 A: a/b three-layered sandwichesX: alpha/beta-HydrolasesH: alpha/beta-HydrolasesT: alpha/beta-HydrolasesF: RNase_TECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF01040UbiA prenyltransferase family (UbiA)UbiA prenyltransferase family- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
prenyltransferase -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR050475Prenyltransferase/isoprenoid biosynthesisFamily
A, B
IPR044878UbiA prenyltransferase superfamilyHomologous Superfamily
A, B
IPR000537UbiA prenyltransferaseFamily

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
A, B
PDBTMAnnotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

ChainsExternal LinkComment
A, B
MemProtMDAnnotated as membrane protein by MemProtMD

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

ChainsResource LinkGroupSubgroupProtein
A, B
mpstrucTRANSMEMBRANE PROTEINS: ALPHA-HELICALUbiA PrenyltransferasesUbiA prenyltransferase domain-containing 1 (UBIAD1) with bound GPP and Mg+2