4S1B | pdb_00004s1b

Crystal Structure of L. monocytogenes phosphodiesterase PgpH HD domain in complex with Cyclic-di-AMP

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
B [auth D]e4s1bD1 A: Four-helical up-and-down bundleX: Thymidylate synthase/dCMP hydroxymethylaseH: Thymidylate synthase/dCMP hydroxymethylaseT: Thymidylat_syntF:ECOD (20:10:01)
Ae4s1bA1 A: Four-helical up-and-down bundleX: Thymidylate synthase/dCMP hydroxymethylaseH: Thymidylate synthase/dCMP hydroxymethylaseT: Polyoma_coatF:ECOD (20:10:01)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
B [auth D]		PF01966HD domain (HD)HD domain- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
B [auth D]		Lmo1466 protein - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
B [auth D]		IPR003607HD/PDEase domainDomain
A,
B [auth D]		IPR006675HDIG domainDomain
A,
B [auth D]		IPR052722Cyclic-di-AMP phosphodiesterase PgpHFamily
A,
B [auth D]		IPR011624Metal-dependent phosphohydrolase, 7TM extracellular domainDomain
A,
B [auth D]		IPR011621Metal-dependent phosphohydrolase, 7TM intracellular domainDomain
A,
B [auth D]		IPR006674HD domainDomain