4RND
Crystal Structure of the subunit DF-assembly of the eukaryotic V-ATPase.
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d4rndb_ | Alpha and beta proteins (a/b) | AtpF-like | AtpF-like | AtpF-like | automated matches | Baker's yeast (Saccharomyces cerevisiae S288C ) [TaxId: 559292 ], | SCOPe (2.08) |
D | d4rndd_ | Alpha and beta proteins (a/b) | AtpF-like | AtpF-like | AtpF-like | automated matches | Baker's yeast (Saccharomyces cerevisiae S288C ) [TaxId: 559292 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF01813 | e4rndA1 | A: alpha bundles | X: V-type proton ATPase subunit D (From Topology) | H: V-type proton ATPase subunit D (From Topology) | T: V-type proton ATPase subunit D | F: PF01813 | ECOD (1.6) |
C | PF01813 | e4rndC1 | A: alpha bundles | X: V-type proton ATPase subunit D (From Topology) | H: V-type proton ATPase subunit D (From Topology) | T: V-type proton ATPase subunit D | F: PF01813 | ECOD (1.6) |
B | PF01990 | e4rndB1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: AtpF-like (From Topology) | T: AtpF-like | F: PF01990 | ECOD (1.6) |
D | PF01990 | e4rndD1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: AtpF-like (From Topology) | T: AtpF-like | F: PF01990 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 3.40.50.10580 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | ATPase, V1 complex, subunit F | CATH (4.3.0) |
D | 3.40.50.10580 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | ATPase, V1 complex, subunit F | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01813 | ATP synthase subunit D (ATP-synt_D) | ATP synthase subunit D | - | Family | |
PF01990 | ATP synthase (F/14-kDa) subunit (ATP-synt_F) | ATP synthase (F/14-kDa) subunit | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR002699 | ATPase, V1 complex, subunit D | Family | |
IPR036906 | ATPase, V1 complex, subunit F superfamily | Homologous Superfamily | |
IPR005772 | ATPase, V1 complex, subunit F, eukaryotic | Family | |
IPR008218 | ATPase, V1 complex, subunit F | Family |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Vacuolar ATPase (V-ATPase) | Subunits DF complex |