4RC1 | pdb_00004rc1

Structure of the methanofuran/methanopterin biosynthetic enzyme MJ1099 from Methanocaldococcus jannaschii with PRPP

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
I	SCOP2B Superfamily	CutC/MfnB-like	8092553	3000639	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	CutC/MfnB-like	8092553	3000639	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	CutC/MfnB-like	8092553	3000639	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	CutC/MfnB-like	8092553	3000639	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	CutC/MfnB-like	8092553	3000639	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	CutC/MfnB-like	8092553	3000639	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	CutC/MfnB-like	8092553	3000639	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	CutC/MfnB-like	8092553	3000639	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	CutC/MfnB-like	8092553	3000639	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
I	4HFCP_synth	e4rc1I1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: 4HFCP_synth	ECOD (1.6)
H	4HFCP_synth	e4rc1H1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: 4HFCP_synth	ECOD (1.6)
G	4HFCP_synth	e4rc1G1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: 4HFCP_synth	ECOD (1.6)
F	4HFCP_synth	e4rc1F1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: 4HFCP_synth	ECOD (1.6)
E	4HFCP_synth	e4rc1E1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: 4HFCP_synth	ECOD (1.6)
D	4HFCP_synth	e4rc1D1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: 4HFCP_synth	ECOD (1.6)
C	4HFCP_synth	e4rc1C1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: 4HFCP_synth	ECOD (1.6)
B	4HFCP_synth	e4rc1B1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: 4HFCP_synth	ECOD (1.6)
A	4HFCP_synth	e4rc1A1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: 4HFCP_synth	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H, I	PF04476	4-HFC-P synthase (4HFCP_synth)	4-HFC-P synthase	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I	UPF0264 protein MJ1099	lyase activity catalytic activity carbon-carbon lyase activity	biosynthetic process methanofuran metabolic process metabolic process cellular process methanofuran biosynthetic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I	IPR007565	(5-formylfuran-3-yl)methyl phosphate synthase	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I	IPR011060	Ribulose-phosphate binding barrel	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I	IPR035081	(5-formylfuran-3-yl)methyl phosphate synthase, archaea	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.