Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APorph_ginge4r4zA2 A: beta meandersX: Lipoprotein localization factors LolABH: Lipoprotein localization factors LolAB (From Topology)T: Lipoprotein localization factors LolABF: Porph_gingECOD (1.6)
AN-glycanase_Ce4r4zA1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: N-glycanase_CECOD (1.6)
AN-glycanase_Ne4r4zA3 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: N-glycanase_NECOD (1.6)
BPorph_ginge4r4zB3 A: beta meandersX: Lipoprotein localization factors LolABH: Lipoprotein localization factors LolAB (From Topology)T: Lipoprotein localization factors LolABF: Porph_gingECOD (1.6)
BN-glycanase_Ce4r4zB2 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: N-glycanase_CECOD (1.6)
BN-glycanase_Ne4r4zB1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: N-glycanase_NECOD (1.6)
CPorph_ginge4r4zC1 A: beta meandersX: Lipoprotein localization factors LolABH: Lipoprotein localization factors LolAB (From Topology)T: Lipoprotein localization factors LolABF: Porph_gingECOD (1.6)
CN-glycanase_Ce4r4zC3 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: N-glycanase_CECOD (1.6)
CN-glycanase_Ne4r4zC2 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: N-glycanase_NECOD (1.6)
DPorph_ginge4r4zD2 A: beta meandersX: Lipoprotein localization factors LolABH: Lipoprotein localization factors LolAB (From Topology)T: Lipoprotein localization factors LolABF: Porph_gingECOD (1.6)
DN-glycanase_Ce4r4zD1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: N-glycanase_CECOD (1.6)
DN-glycanase_Ne4r4zD3 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: N-glycanase_NECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.60.120.1570 Mainly Beta Sandwich Jelly Rolls Peptide-N-glycosidase F, N-terminal domainCATH (4.3.0)
A2.60.120.230 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
B2.60.120.1570 Mainly Beta Sandwich Jelly Rolls Peptide-N-glycosidase F, N-terminal domainCATH (4.3.0)
B2.60.120.230 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
C2.60.120.1570 Mainly Beta Sandwich Jelly Rolls Peptide-N-glycosidase F, N-terminal domainCATH (4.3.0)
C2.60.120.230 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
D2.60.120.1570 Mainly Beta Sandwich Jelly Rolls Peptide-N-glycosidase F, N-terminal domainCATH (4.3.0)
D2.60.120.230 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF09113Peptide-N-glycosidase F, C terminal (N-glycanase_C)Peptide-N-glycosidase F, C terminalMembers of this family adopt an eight-stranded antiparallel beta jelly roll configuration, with the beta strands arranged into two sheets. They are similar in topology to many viral capsid proteins, as well as lectins and several glucanases. The doma ...Members of this family adopt an eight-stranded antiparallel beta jelly roll configuration, with the beta strands arranged into two sheets. They are similar in topology to many viral capsid proteins, as well as lectins and several glucanases. The domain allows the protein to bind sugars and catalyses the complete removal of N-linked oligosaccharide chains from glycoproteins [1].
Domain
A, B, C, D
PF22252N-glycanase peptide, N-terminal domain (PNGase_F-II_N)N-glycanase peptide, N-terminal domainThis domain is found at the N-terminal end of N-glycanase peptide from Elizabethkingia meningoseptica (PNGase F-II) and other bacterial sequences mainly found in flavobacteriales. This is often found associated with Pfam:PF09112 and Pfam:PF09113.Domain
A, B, C, D
PF09112Peptide-N-glycosidase F, N terminal (N-glycanase_N)Peptide-N-glycosidase F, N terminalMembers of this family adopt an eight-stranded antiparallel beta jelly roll configuration, with the beta strands arranged into two sheets. They are similar in topology to many viral capsid proteins, as well as lectins and several glucanases. The doma ...Members of this family adopt an eight-stranded antiparallel beta jelly roll configuration, with the beta strands arranged into two sheets. They are similar in topology to many viral capsid proteins, as well as lectins and several glucanases. The domain allows the protein to bind sugars and catalyses the complete removal of N-linked oligosaccharide chains from glycoproteins [1].
Domain